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BioLiP
Download all results in tab-seperated text for 36 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 5nsm:A (2.4) BS01 BCT ? GO:0004177 ... Q385B0 28815215
    2 5nsm:A (2.4) BS02 MN ? GO:0004177 ... Q385B0 28815215
    3 5nsm:A (2.4) BS03 MN ? GO:0004177 ... Q385B0 28815215
    4 5nsm:B (2.4) BS01 BCT ? GO:0004177 ... Q385B0 28815215
    5 5nsm:B (2.4) BS02 MN ? GO:0004177 ... Q385B0 28815215
    6 5nsm:B (2.4) BS03 MN ? GO:0004177 ... Q385B0 28815215
    7 5nsm:C (2.4) BS01 BCT ? GO:0004177 ... Q385B0 28815215
    8 5nsm:C (2.4) BS02 MN ? GO:0004177 ... Q385B0 28815215
    9 5nsm:C (2.4) BS03 MN ? GO:0004177 ... Q385B0 28815215
    10 5nsm:D (2.4) BS01 BCT ? GO:0004177 ... Q385B0 28815215
    11 5nsm:D (2.4) BS02 MN ? GO:0004177 ... Q385B0 28815215
    12 5nsm:D (2.4) BS03 MN ? GO:0004177 ... Q385B0 28815215
    13 5nsm:E (2.4) BS01 BCT ? GO:0004177 ... Q385B0 28815215
    14 5nsm:E (2.4) BS02 MN ? GO:0004177 ... Q385B0 28815215
    15 5nsm:E (2.4) BS03 MN ? GO:0004177 ... Q385B0 28815215
    16 5nsm:F (2.4) BS01 BCT ? GO:0004177 ... Q385B0 28815215
    17 5nsm:F (2.4) BS02 MN ? GO:0004177 ... Q385B0 28815215
    18 5nsm:F (2.4) BS03 MN ? GO:0004177 ... Q385B0 28815215
    19 5nsm:G (2.4) BS01 BCT ? GO:0004177 ... Q385B0 28815215
    20 5nsm:G (2.4) BS02 MN ? GO:0004177 ... Q385B0 28815215
    21 5nsm:G (2.4) BS03 MN ? GO:0004177 ... Q385B0 28815215
    22 5nsm:H (2.4) BS01 BCT ? GO:0004177 ... Q385B0 28815215
    23 5nsm:H (2.4) BS02 MN ? GO:0004177 ... Q385B0 28815215
    24 5nsm:H (2.4) BS03 MN ? GO:0004177 ... Q385B0 28815215
    25 5nsm:I (2.4) BS01 BCT ? GO:0004177 ... Q385B0 28815215
    26 5nsm:I (2.4) BS02 MN ? GO:0004177 ... Q385B0 28815215
    27 5nsm:I (2.4) BS03 MN ? GO:0004177 ... Q385B0 28815215
    28 5nsm:J (2.4) BS01 BCT ? GO:0004177 ... Q385B0 28815215
    29 5nsm:J (2.4) BS02 MN ? GO:0004177 ... Q385B0 28815215
    30 5nsm:J (2.4) BS03 MN ? GO:0004177 ... Q385B0 28815215
    31 5nsm:K (2.4) BS01 BCT ? GO:0004177 ... Q385B0 28815215
    32 5nsm:K (2.4) BS02 MN ? GO:0004177 ... Q385B0 28815215
    33 5nsm:K (2.4) BS03 MN ? GO:0004177 ... Q385B0 28815215
    34 5nsm:L (2.4) BS01 BCT ? GO:0004177 ... Q385B0 28815215
    35 5nsm:L (2.4) BS02 MN ? GO:0004177 ... Q385B0 28815215
    36 5nsm:L (2.4) BS03 MN ? GO:0004177 ... Q385B0 28815215
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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