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BioLiP
Download all results in tab-seperated text for 460725 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    458601 9b5d:A (2.8) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    458602 9b5d:C (2.8) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    458603 9b5e:A (2.81) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    458604 9b5e:A (2.81) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    458605 9b5e:C (2.81) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    458606 9b5f:A (2.78) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    458607 9b5f:A (2.78) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    458608 9b5f:C (2.78) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    458609 9b5g:A (2.67) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    458610 9b5g:A (2.67) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    458611 9b5g:C (2.67) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    458612 9b5h:A (2.69) BS01 POP 6.2.1.45 GO:0000287 ... O94609 39143218
    458613 9b5h:A (2.69) BS02 AMP 6.2.1.45 GO:0000287 ... O94609 39143218
    458614 9b5h:A (2.69) BS03 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    458615 9b5h:C (2.69) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    458616 9b5i:A (2.7) BS01 POP 6.2.1.45 GO:0000287 ... O94609 39143218
    458617 9b5i:A (2.7) BS02 AMP 6.2.1.45 GO:0000287 ... O94609 39143218
    458618 9b5i:A (2.7) BS03 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    458619 9b5j:A (2.86) BS01 AMP 6.2.1.45 GO:0000287 ... O94609 39143218
    458620 9b5j:A (2.86) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    458621 9b5k:A (3.16) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    458622 9b5k:C (3.16) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    458623 9b5l:A (3.3) BS01 AMP 6.2.1.45 GO:0000287 ... O94609 39143218
    458624 9b5l:A (3.3) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    458625 9b5l:C (3.3) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    458626 9b5m:A (2.79) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    458627 9b5m:A (2.79) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    458628 9b5m:C (2.79) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    458629 9b5n:A (3.12) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    458630 9b5n:A (3.12) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    458631 9b5n:C (3.12) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    458632 9b5o:A (3.19) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    458633 9b5o:A (3.19) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    458634 9b5o:C (3.19) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    458635 9b5p:A (3.08) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    458636 9b5p:A (3.08) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    458637 9b5p:C (3.08) BS02 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    458638 9b5q:A (2.95) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    458639 9b5q:A (2.95) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    458640 9b5q:C (2.95) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    458641 9b5r:A (2.95) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    458642 9b5r:A (2.95) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    458643 9b5r:C (2.95) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    458644 9b5s:A (2.96) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    458645 9b5s:A (2.96) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    458646 9b5t:A (3.16) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    458647 9b5t:A (3.16) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    458648 9b5u:A (3.67) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    458649 9b5v:A (3.94) BS02 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    458650 9b5v:C (3.94) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    458651 9b5w:A (3.96) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    458652 9b5w:A (3.96) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    458653 9b5w:C (3.96) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    458654 9b5x:A (4.16) BS02 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    458655 9b5x:A (4.16) BS03 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    458656 9b5x:C (4.16) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    458657 9b6d:A (3.3) BS01 Y01 N/A N/A Q8R4D5 39093967
    458658 9b6d:A (3.3) BS02 Y01 N/A N/A Q8R4D5 39093967
    458659 9b6d:A (3.3) BS03 Y01 N/A N/A Q8R4D5 39093967
    458660 9b6d:B (3.3) BS01 Y01 N/A N/A Q8R4D5 39093967
    458661 9b6d:B (3.3) BS02 Y01 N/A N/A Q8R4D5 39093967
    458662 9b6d:C (3.3) BS01 Y01 N/A N/A Q8R4D5 39093967
    458663 9b6d:C (3.3) BS02 Y01 N/A N/A Q8R4D5 39093967
    458664 9b6d:D (3.3) BS01 Y01 N/A N/A Q8R4D5 39093967
    458665 9b6d:D (3.3) BS02 Y01 N/A N/A Q8R4D5 39093967
    458666 9b6d:D (3.3) BS03 Y01 N/A N/A Q8R4D5 39093967
    458667 9b6e:A (2.91) BS01 Y01 N/A N/A Q8R4D5 39093967
    458668 9b6e:A (2.91) BS02 T14 N/A N/A Q8R4D5 39093967
    458669 9b6e:B (2.91) BS01 T14 N/A N/A Q8R4D5 39093967
    458670 9b6e:B (2.91) BS02 Y01 N/A N/A Q8R4D5 39093967
    458671 9b6e:C (2.91) BS01 T14 N/A N/A Q8R4D5 39093967
    458672 9b6e:C (2.91) BS02 Y01 N/A N/A Q8R4D5 39093967
    458673 9b6e:D (2.91) BS01 T14 N/A N/A Q8R4D5 39093967
    458674 9b6e:D (2.91) BS02 Y01 N/A N/A Q8R4D5 39093967
    458675 9b6f:A (3.42) BS01 Y01 N/A N/A Q8R4D5 39093967
    458676 9b6f:A (3.42) BS02 Y01 N/A N/A Q8R4D5 39093967
    458677 9b6f:A (3.42) BS03 A1AIY N/A N/A Q8R4D5 39093967
    458678 9b6f:B (3.42) BS01 A1AIY N/A N/A Q8R4D5 39093967
    458679 9b6f:B (3.42) BS02 Y01 N/A N/A Q8R4D5 39093967
    458680 9b6f:B (3.42) BS03 Y01 N/A N/A Q8R4D5 39093967
    458681 9b6f:C (3.42) BS01 A1AIY N/A N/A Q8R4D5 39093967
    458682 9b6f:C (3.42) BS02 Y01 N/A N/A Q8R4D5 39093967
    458683 9b6f:C (3.42) BS03 Y01 N/A N/A Q8R4D5 39093967
    458684 9b6f:D (3.42) BS01 A1AIY N/A N/A Q8R4D5 39093967
    458685 9b6f:D (3.42) BS02 Y01 N/A N/A Q8R4D5 39093967
    458686 9b6f:D (3.42) BS03 Y01 N/A N/A Q8R4D5 39093967
    458687 9b6g:A (2.81) BS01 Y01 N/A N/A Q8R4D5 39093967
    458688 9b6g:A (2.81) BS02 Y01 N/A N/A Q8R4D5 39093967
    458689 9b6g:A (2.81) BS03 Y01 N/A N/A Q8R4D5 39093967
    458690 9b6g:A (2.81) BS04 LQ7 N/A N/A Q8R4D5 39093967
    458691 9b6g:A (2.81) BS05 Y01 N/A N/A Q8R4D5 39093967
    458692 9b6g:A (2.81) BS06 Y01 N/A N/A Q8R4D5 39093967
    458693 9b6g:B (2.81) BS01 Y01 N/A N/A Q8R4D5 39093967
    458694 9b6g:B (2.81) BS02 Y01 N/A N/A Q8R4D5 39093967
    458695 9b6g:B (2.81) BS03 Y01 N/A N/A Q8R4D5 39093967
    458696 9b6g:B (2.81) BS04 Y01 N/A N/A Q8R4D5 39093967
    458697 9b6g:B (2.81) BS05 Y01 N/A N/A Q8R4D5 39093967
    458698 9b6g:B (2.81) BS06 LQ7 N/A N/A Q8R4D5 39093967
    458699 9b6g:C (2.81) BS01 Y01 N/A N/A Q8R4D5 39093967
    458700 9b6g:C (2.81) BS02 Y01 N/A N/A Q8R4D5 39093967
    458701 9b6g:C (2.81) BS03 Y01 N/A N/A Q8R4D5 39093967
    458702 9b6g:C (2.81) BS04 Y01 N/A N/A Q8R4D5 39093967
    458703 9b6g:C (2.81) BS05 Y01 N/A N/A Q8R4D5 39093967
    458704 9b6g:C (2.81) BS06 LQ7 N/A N/A Q8R4D5 39093967
    458705 9b6g:D (2.81) BS01 Y01 N/A N/A Q8R4D5 39093967
    458706 9b6g:D (2.81) BS02 Y01 N/A N/A Q8R4D5 39093967
    458707 9b6g:D (2.81) BS03 Y01 N/A N/A Q8R4D5 39093967
    458708 9b6g:D (2.81) BS04 Y01 N/A N/A Q8R4D5 39093967
    458709 9b6g:D (2.81) BS05 Y01 N/A N/A Q8R4D5 39093967
    458710 9b6g:D (2.81) BS06 LQ7 N/A N/A Q8R4D5 39093967
    458711 9b6h:A (2.76) BS01 Y01 N/A N/A Q8R4D5 39093967
    458712 9b6h:A (2.76) BS02 Y01 N/A N/A Q8R4D5 39093967
    458713 9b6h:A (2.76) BS03 ULO N/A N/A Q8R4D5 39093967
    458714 9b6h:A (2.76) BS04 T14 N/A N/A Q8R4D5 39093967
    458715 9b6h:A (2.76) BS05 Y01 N/A N/A Q8R4D5 39093967
    458716 9b6h:B (2.76) BS01 T14 N/A N/A Q8R4D5 39093967
    458717 9b6h:B (2.76) BS02 Y01 N/A N/A Q8R4D5 39093967
    458718 9b6h:B (2.76) BS03 Y01 N/A N/A Q8R4D5 39093967
    458719 9b6h:B (2.76) BS04 Y01 N/A N/A Q8R4D5 39093967
    458720 9b6h:B (2.76) BS05 ULO N/A N/A Q8R4D5 39093967
    458721 9b6h:C (2.76) BS01 T14 N/A N/A Q8R4D5 39093967
    458722 9b6h:C (2.76) BS02 Y01 N/A N/A Q8R4D5 39093967
    458723 9b6h:C (2.76) BS03 Y01 N/A N/A Q8R4D5 39093967
    458724 9b6h:C (2.76) BS04 Y01 N/A N/A Q8R4D5 39093967
    458725 9b6h:C (2.76) BS05 ULO N/A N/A Q8R4D5 39093967
    458726 9b6h:D (2.76) BS01 T14 N/A N/A Q8R4D5 39093967
    458727 9b6h:D (2.76) BS02 Y01 N/A N/A Q8R4D5 39093967
    458728 9b6h:D (2.76) BS03 Y01 N/A N/A Q8R4D5 39093967
    458729 9b6h:D (2.76) BS04 Y01 N/A N/A Q8R4D5 39093967
    458730 9b6h:D (2.76) BS05 ULO N/A N/A Q8R4D5 39093967
    458731 9b6i:A (3.26) BS01 Y01 N/A N/A N/A 39093967
    458732 9b6i:A (3.26) BS02 Y01 N/A N/A N/A 39093967
    458733 9b6i:A (3.26) BS03 Y01 N/A N/A N/A 39093967
    458734 9b6i:A (3.26) BS04 T14 N/A N/A N/A 39093967
    458735 9b6i:A (3.26) BS05 Y01 N/A N/A N/A 39093967
    458736 9b6i:A (3.26) BS06 Y01 N/A N/A N/A 39093967
    458737 9b6i:A (3.26) BS07 T14 N/A N/A N/A 39093967
    458738 9b6i:B (3.26) BS01 Y01 N/A N/A N/A 39093967
    458739 9b6i:B (3.26) BS02 T14 N/A N/A N/A 39093967
    458740 9b6i:B (3.26) BS03 Y01 N/A N/A N/A 39093967
    458741 9b6i:B (3.26) BS04 Y01 N/A N/A N/A 39093967
    458742 9b6i:B (3.26) BS05 Y01 N/A N/A N/A 39093967
    458743 9b6i:B (3.26) BS06 T14 N/A N/A N/A 39093967
    458744 9b6i:B (3.26) BS07 Y01 N/A N/A N/A 39093967
    458745 9b6i:C (3.26) BS01 Y01 N/A N/A N/A 39093967
    458746 9b6i:C (3.26) BS02 T14 N/A N/A N/A 39093967
    458747 9b6i:C (3.26) BS03 Y01 N/A N/A N/A 39093967
    458748 9b6i:C (3.26) BS04 Y01 N/A N/A N/A 39093967
    458749 9b6i:C (3.26) BS05 Y01 N/A N/A N/A 39093967
    458750 9b6i:C (3.26) BS06 T14 N/A N/A N/A 39093967
    458751 9b6i:C (3.26) BS07 Y01 N/A N/A N/A 39093967
    458752 9b6i:D (3.26) BS01 Y01 N/A N/A N/A 39093967
    458753 9b6i:D (3.26) BS02 Y01 N/A N/A N/A 39093967
    458754 9b6i:D (3.26) BS03 Y01 N/A N/A N/A 39093967
    458755 9b6i:D (3.26) BS04 T14 N/A N/A N/A 39093967
    458756 9b6i:D (3.26) BS05 Y01 N/A N/A N/A 39093967
    458757 9b6i:D (3.26) BS06 Y01 N/A N/A N/A 39093967
    458758 9b6i:D (3.26) BS07 T14 N/A N/A N/A 39093967
    458759 9b6j:A (3.53) BS02 PIO N/A N/A Q8R4D5 39093967
    458760 9b6j:B (3.53) BS02 PIO N/A N/A Q8R4D5 39093967
    458761 9b6j:C (3.53) BS02 PIO N/A N/A Q8R4D5 39093967
    458762 9b6j:D (3.53) BS02 PIO N/A N/A Q8R4D5 39093967
    458763 9b70:A (2.88) BS01 A1AI1 N/A GO:0005886 ... O66465 38877016
    458764 9b70:B (2.88) BS01 A1AI1 N/A GO:0005886 ... O66465 38877016
    458765 9b71:A (2.7) BS01 A1AI2 N/A GO:0005886 ... O66465 38877016
    458766 9b71:B (2.7) BS01 A1AI2 N/A GO:0005886 ... O66465 38877016
    458767 9b8o:a (3.2) BS01 MAN N/A GO:0000220 ... P25286 38900912
    458768 9b8o:a (3.2) BS02 GLC N/A GO:0000220 ... P25286 38900912
    458769 9b8o:a (3.2) BS03 WJP N/A GO:0000220 ... P25286 38900912
    458770 9b8o:a (3.2) BS04 LP3 N/A GO:0000220 ... P25286 38900912
    458771 9b8o:f (3.2) BS01 LP3 N/A N/A A0A8J8YMT9 38900912
    458772 9b8o:h (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    458773 9b8o:i (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    458774 9b8o:i (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    458775 9b8o:i (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    458776 9b8o:j (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    458777 9b8o:j (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    458778 9b8o:j (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    458779 9b8o:j (3.2) BS04 CLR N/A GO:0000220 ... P63081 38900912
    458780 9b8o:k (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    458781 9b8o:k (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    458782 9b8o:k (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    458783 9b8o:l (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    458784 9b8o:l (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    458785 9b8o:l (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    458786 9b8o:m (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    458787 9b8o:m (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    458788 9b8o:m (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    458789 9b8o:n (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    458790 9b8o:n (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    458791 9b8o:n (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    458792 9b8o:n (3.2) BS04 CLR N/A GO:0000220 ... P63081 38900912
    458793 9b8o:n (3.2) BS05 CLR N/A GO:0000220 ... P63081 38900912
    458794 9b8o:o (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    458795 9b8o:o (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    458796 9b8o:o (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    458797 9b8p:A (3.2) BS01 ADP N/A GO:0000221 ... D4A133 38900912
    458798 9b8p:D (3.2) BS01 ADP N/A GO:0000221 ... P62815 38900912
    458799 9b8s:A (5.01) BS03 SF4 N/A N/A Q07864 39245668
    458800 9b8t:A (2.95) BS03 TTP N/A N/A Q9Y5S4 39245668
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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