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BioLiP
Download all results in tab-seperated text for 460725 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    447201 8u7v:B (3.3) BS05 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    447202 8u7v:C (3.3) BS01 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    447203 8u7v:C (3.3) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    447204 8u7v:C (3.3) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    447205 8u7v:C (3.3) BS04 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    447206 8u7v:C (3.3) BS05 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    447207 8u7v:D (3.3) BS01 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    447208 8u7v:D (3.3) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    447209 8u7v:D (3.3) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    447210 8u7v:D (3.3) BS04 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    447211 8u7v:D (3.3) BS05 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    447212 8u7v:E (3.3) BS01 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    447213 8u7v:E (3.3) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    447214 8u7v:E (3.3) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    447215 8u7v:E (3.3) BS04 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    447216 8u7v:E (3.3) BS05 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    447217 8u7v:F (3.3) BS01 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    447218 8u7v:F (3.3) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    447219 8u7v:F (3.3) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    447220 8u7v:F (3.3) BS04 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    447221 8u7v:F (3.3) BS05 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    447222 8u7v:G (3.3) BS01 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    447223 8u7v:G (3.3) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    447224 8u7v:G (3.3) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    447225 8u7v:G (3.3) BS04 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    447226 8u7v:G (3.3) BS05 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    447227 8u7v:H (3.3) BS01 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    447228 8u7v:H (3.3) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    447229 8u7v:H (3.3) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    447230 8u7v:H (3.3) BS04 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    447231 8u7v:H (3.3) BS05 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    447232 8u7w:A (2.05) BS01 W8I 3.1.3.48 GO:0004725 ... Q06124 38116446
    447233 8u7w:B (2.05) BS01 W8I 3.1.3.48 GO:0004725 ... Q06124 38116446
    447234 8u7x:A (2.06) BS01 WAB 3.1.3.48 GO:0004725 ... Q06124 38116446
    447235 8u7x:B (2.06) BS01 WAB 3.1.3.48 GO:0004725 ... Q06124 38116446
    447236 8u7y:A (4.06) BS01 FAD 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447237 8u7y:A (4.06) BS02 NAP 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447238 8u7y:A (4.06) BS03 HEB 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447239 8u7y:A (4.06) BS04 HEB 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447240 8u7y:B (4.06) BS01 FAD 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447241 8u7y:B (4.06) BS02 NAP 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447242 8u7y:B (4.06) BS03 HEB 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447243 8u7y:B (4.06) BS04 HEB 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447244 8u85:A (3.2) BS01 HEB 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447245 8u85:A (3.2) BS02 HEB 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447246 8u85:A (3.2) BS03 NDP 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447247 8u85:A (3.2) BS04 FAD 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447248 8u85:C (3.2) BS02 HEB 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447249 8u85:C (3.2) BS03 HEB 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447250 8u85:C (3.2) BS04 NDP 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447251 8u85:C (3.2) BS05 FAD 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447252 8u86:A (3.3) BS01 HEB 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447253 8u86:A (3.3) BS02 HEB 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447254 8u86:A (3.3) BS03 NDP 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447255 8u86:A (3.3) BS04 FAD 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447256 8u86:C (3.3) BS01 HEB 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447257 8u86:C (3.3) BS02 HEB 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447258 8u86:C (3.3) BS03 NDP 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447259 8u86:C (3.3) BS04 FAD 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447260 8u87:A (3.86) BS01 HEB 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447261 8u87:A (3.86) BS02 HEB 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447262 8u87:A (3.86) BS03 NDP 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447263 8u87:A (3.86) BS04 FAD 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447264 8u87:C (3.86) BS02 HEB 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447265 8u87:C (3.86) BS03 HEB 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447266 8u87:C (3.86) BS04 NDP 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447267 8u87:C (3.86) BS05 FAD 1.6.3.- GO:0001525 ... Q96PH1 N/A
    447268 8u8a:B (3.4) BS01 0LI 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38263358
    447269 8u8a:B (3.4) BS02 GDP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38263358
    447270 8u8a:C (3.4) BS01 0LI 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38263358
    447271 8u8a:C (3.4) BS02 GDP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38263358
    447272 8u8b:A (3.7) BS01 GDP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38263358
    447273 8u8b:A (3.7) BS02 919 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38263358
    447274 8u8b:B (3.7) BS01 GDP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38263358
    447275 8u8b:B (3.7) BS02 919 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38263358
    447276 8u8j:A (2.1) BS01 WAL 2.7.11.24 GO:0000165 ... P28482 38537148
    447277 8u8k:A (2.1) BS01 W8U 2.7.11.24 GO:0000165 ... P28482 38537148
    447278 8u8o:A (2.4) BS01 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    447279 8u8o:A (2.4) BS02 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    447280 8u8o:A (2.4) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    447281 8u8o:A (2.4) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    447282 8u8o:B (2.4) BS01 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    447283 8u8o:B (2.4) BS02 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    447284 8u8o:B (2.4) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    447285 8u8o:B (2.4) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    447286 8u8o:C (2.4) BS01 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    447287 8u8o:C (2.4) BS02 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    447288 8u8o:C (2.4) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    447289 8u8o:C (2.4) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    447290 8u8o:D (2.4) BS01 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    447291 8u8o:D (2.4) BS02 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    447292 8u8o:D (2.4) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    447293 8u8o:D (2.4) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    447294 8u8o:E (2.4) BS01 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    447295 8u8o:E (2.4) BS02 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    447296 8u8o:E (2.4) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    447297 8u8o:E (2.4) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    447298 8u8o:F (2.4) BS01 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    447299 8u8o:F (2.4) BS02 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    447300 8u8o:F (2.4) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    447301 8u8o:F (2.4) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    447302 8u8o:G (2.4) BS01 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    447303 8u8o:G (2.4) BS02 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    447304 8u8o:G (2.4) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    447305 8u8o:G (2.4) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    447306 8u8o:H (2.4) BS01 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    447307 8u8o:H (2.4) BS02 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    447308 8u8o:H (2.4) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    447309 8u8o:H (2.4) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    447310 8u8p:A (2.2) BS04 GLY ? GO:0005507 ... Q9XAL8 37926680
    447311 8u8p:A (2.2) BS05 GLY ? GO:0005507 ... Q9XAL8 37926680
    447312 8u8p:A (2.2) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    447313 8u8p:A (2.2) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    447314 8u8p:A (2.2) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    447315 8u8p:A (2.2) BS10 GLY ? GO:0005507 ... Q9XAL8 37926680
    447316 8u8p:A (2.2) BS11 GLY ? GO:0005507 ... Q9XAL8 37926680
    447317 8u8p:B (2.2) BS01 GLY ? GO:0005507 ... Q9XAL8 37926680
    447318 8u8p:B (2.2) BS05 GLY ? GO:0005507 ... Q9XAL8 37926680
    447319 8u8p:B (2.2) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    447320 8u8p:B (2.2) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    447321 8u8p:B (2.2) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    447322 8u8p:B (2.2) BS09 GLY ? GO:0005507 ... Q9XAL8 37926680
    447323 8u8p:B (2.2) BS11 GLY ? GO:0005507 ... Q9XAL8 37926680
    447324 8u8p:C (2.2) BS01 GLY ? GO:0005507 ... Q9XAL8 37926680
    447325 8u8p:C (2.2) BS03 GLY ? GO:0005507 ... Q9XAL8 37926680
    447326 8u8p:C (2.2) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    447327 8u8p:C (2.2) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    447328 8u8p:C (2.2) BS09 GLY ? GO:0005507 ... Q9XAL8 37926680
    447329 8u8p:C (2.2) BS10 GLY ? GO:0005507 ... Q9XAL8 37926680
    447330 8u8p:C (2.2) BS11 GLY ? GO:0005507 ... Q9XAL8 37926680
    447331 8u8q:A (2.7) BS04 GLY ? GO:0005507 ... Q9XAL8 37926680
    447332 8u8q:A (2.7) BS05 GLY ? GO:0005507 ... Q9XAL8 37926680
    447333 8u8q:A (2.7) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    447334 8u8q:A (2.7) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    447335 8u8q:A (2.7) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    447336 8u8q:A (2.7) BS10 GLY ? GO:0005507 ... Q9XAL8 37926680
    447337 8u8q:B (2.7) BS01 GLY ? GO:0005507 ... Q9XAL8 37926680
    447338 8u8q:B (2.7) BS05 GLY ? GO:0005507 ... Q9XAL8 37926680
    447339 8u8q:B (2.7) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    447340 8u8q:B (2.7) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    447341 8u8q:B (2.7) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    447342 8u8q:B (2.7) BS09 GLY ? GO:0005507 ... Q9XAL8 37926680
    447343 8u8q:C (2.7) BS02 GLY ? GO:0005507 ... Q9XAL8 37926680
    447344 8u8q:C (2.7) BS03 GLY ? GO:0005507 ... Q9XAL8 37926680
    447345 8u8q:C (2.7) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    447346 8u8q:C (2.7) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    447347 8u8q:C (2.7) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    447348 8u8q:C (2.7) BS09 GLY ? GO:0005507 ... Q9XAL8 37926680
    447349 8u8r:A (2.86) BS04 GLY ? GO:0005507 ... Q9XAL8 37926680
    447350 8u8r:A (2.86) BS05 GLY ? GO:0005507 ... Q9XAL8 37926680
    447351 8u8r:A (2.86) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    447352 8u8r:A (2.86) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    447353 8u8r:A (2.86) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    447354 8u8r:A (2.86) BS10 GLY ? GO:0005507 ... Q9XAL8 37926680
    447355 8u8r:B (2.86) BS01 GLY ? GO:0005507 ... Q9XAL8 37926680
    447356 8u8r:B (2.86) BS04 GLY ? GO:0005507 ... Q9XAL8 37926680
    447357 8u8r:B (2.86) BS05 GLY ? GO:0005507 ... Q9XAL8 37926680
    447358 8u8r:B (2.86) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    447359 8u8r:B (2.86) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    447360 8u8r:B (2.86) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    447361 8u8r:C (2.86) BS02 GLY ? GO:0005507 ... Q9XAL8 37926680
    447362 8u8r:C (2.86) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    447363 8u8r:C (2.86) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    447364 8u8r:C (2.86) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    447365 8u8r:C (2.86) BS09 GLY ? GO:0005507 ... Q9XAL8 37926680
    447366 8u8s:A (2.63) BS04 GLY ? GO:0005507 ... Q9XAL8 37926680
    447367 8u8s:A (2.63) BS05 GLY ? GO:0005507 ... Q9XAL8 37926680
    447368 8u8s:A (2.63) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    447369 8u8s:A (2.63) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    447370 8u8s:A (2.63) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    447371 8u8s:A (2.63) BS10 GLY ? GO:0005507 ... Q9XAL8 37926680
    447372 8u8s:B (2.63) BS01 GLY ? GO:0005507 ... Q9XAL8 37926680
    447373 8u8s:B (2.63) BS05 GLY ? GO:0005507 ... Q9XAL8 37926680
    447374 8u8s:B (2.63) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    447375 8u8s:B (2.63) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    447376 8u8s:B (2.63) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    447377 8u8s:B (2.63) BS09 GLY ? GO:0005507 ... Q9XAL8 37926680
    447378 8u8s:C (2.63) BS02 GLY ? GO:0005507 ... Q9XAL8 37926680
    447379 8u8s:C (2.63) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    447380 8u8s:C (2.63) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    447381 8u8s:C (2.63) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    447382 8u8s:C (2.63) BS09 GLY ? GO:0005507 ... Q9XAL8 37926680
    447383 8u8t:A (2.9) BS03 GLY ? GO:0005507 ... Q9XAL8 37926680
    447384 8u8t:A (2.9) BS04 GLY ? GO:0005507 ... Q9XAL8 37926680
    447385 8u8t:A (2.9) BS05 GLY ? GO:0005507 ... Q9XAL8 37926680
    447386 8u8t:A (2.9) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    447387 8u8t:A (2.9) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    447388 8u8t:A (2.9) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    447389 8u8t:A (2.9) BS10 GLY ? GO:0005507 ... Q9XAL8 37926680
    447390 8u8t:B (2.9) BS01 GLY ? GO:0005507 ... Q9XAL8 37926680
    447391 8u8t:B (2.9) BS04 GLY ? GO:0005507 ... Q9XAL8 37926680
    447392 8u8t:B (2.9) BS05 GLY ? GO:0005507 ... Q9XAL8 37926680
    447393 8u8t:B (2.9) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    447394 8u8t:B (2.9) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    447395 8u8t:C (2.9) BS01 GLY ? GO:0005507 ... Q9XAL8 37926680
    447396 8u8t:C (2.9) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    447397 8u8t:C (2.9) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    447398 8u8t:C (2.9) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    447399 8u8t:C (2.9) BS09 GLY ? GO:0005507 ... Q9XAL8 37926680
    447400 8u8t:C (2.9) BS10 GLY ? GO:0005507 ... Q9XAL8 37926680

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218