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BioLiP
Download all results in tab-seperated text for 460725 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    446001 8tnc:C (1.4) BS01 3JD N/A N/A N/A 38574125
    446002 8tnd:A (1.29) BS01 78P N/A N/A N/A 38574125
    446003 8tnd:B (1.29) BS01 78P N/A N/A N/A 38574125
    446004 8tnd:C (1.29) BS01 78P N/A N/A N/A 38574125
    446005 8tnk:A (1.79) BS01 IRJ ? GO:0004497 ... Q2IU02 37837941
    446006 8tnk:A (1.79) BS02 HEM ? GO:0004497 ... Q2IU02 37837941
    446007 8tnp:B (3.3) BS02 Y70 ? GO:0005515 ... Q96SW2 38484051
    446008 8tnp:C (3.3) BS01 Y70 ? GO:0005515 ... P0AEX9
    Q13422
    38484051
    446009 8tnq:B (2.41) BS02 MIQ ? GO:0005515 ... Q96SW2 38484051
    446010 8tnq:C (2.41) BS01 MIQ ? GO:0005515 ... P0AEX9
    Q13422
    38484051
    446011 8tnr:B (2.5) BS02 MIQ ? GO:0005515 ... Q96SW2 38484051
    446012 8tnr:C (2.5) BS01 MIQ ? GO:0005515 ... P0AEX9
    Q13422
    38484051
    446013 8tnv:A (1.5) BS01 CUO N/A GO:0016491 ... N/A 38513659
    446014 8tnv:B (1.5) BS01 CUO N/A GO:0016491 ... N/A 38513659
    446015 8tny:A (3.55) BS01 SO4 ? GO:0001503 ... P50443 38684689
    446016 8tny:B (3.55) BS01 SO4 ? GO:0001503 ... P50443 38684689
    446017 8to1:I (2.8) BS01 4QM N/A GO:0000345 ... P0A8V2 38951624
    446018 8to1:I (2.8) BS02 4QM N/A GO:0000345 ... P0A8V2 38951624
    446019 8to2:B (2.0) BS01 45D ? GO:0005515 ... P74102 38578996
    446020 8to3:A (2.49) BS01 IXC N/A N/A P00533 N/A
    446021 8to3:B (2.49) BS02 ANP N/A N/A P00533 N/A
    446022 8to3:C (2.49) BS02 ANP N/A N/A P00533 N/A
    446023 8to3:D (2.49) BS02 ANP N/A N/A P00533 N/A
    446024 8to4:A (2.99) BS02 ANP N/A N/A P00533 N/A
    446025 8to4:B (2.99) BS02 ANP N/A N/A P00533 N/A
    446026 8to4:C (2.99) BS02 ANP N/A N/A P00533 N/A
    446027 8to4:C (2.99) BS03 IXR N/A N/A P00533 N/A
    446028 8to4:D (2.99) BS02 ANP N/A N/A P00533 N/A
    446029 8to4:D (2.99) BS03 IXR N/A N/A P00533 N/A
    446030 8to6:I (2.9) BS02 4QM N/A GO:0000345 ... P0A8V2 38951624
    446031 8to8:I (2.9) BS01 4QM N/A GO:0000345 ... P0A8V2 38951624
    446032 8to8:I (2.9) BS02 4QM N/A GO:0000345 ... P0A8V2 38951624
    446033 8to8:L (2.9) BS03 4QM N/A GO:0000345 ... P00579 38951624
    446034 8toe:I (2.9) BS01 1N7 N/A GO:0000345 ... P0A8V2 38951624
    446035 8toe:L (2.9) BS03 1N7 N/A GO:0000345 ... P00579 38951624
    446036 8toi:A (2.64) BS03 PGW ? GO:0005254 ... C7Z7K1 38684930
    446037 8toi:A (2.64) BS04 PGW ? GO:0005254 ... C7Z7K1 38684930
    446038 8toi:A (2.64) BS05 PGW ? GO:0005254 ... C7Z7K1 38684930
    446039 8toi:A (2.64) BS06 PGW ? GO:0005254 ... C7Z7K1 38684930
    446040 8toi:A (2.64) BS07 PGW ? GO:0005254 ... C7Z7K1 38684930
    446041 8toi:A (2.64) BS08 PGW ? GO:0005254 ... C7Z7K1 38684930
    446042 8toi:A (2.64) BS09 PGW ? GO:0005254 ... C7Z7K1 38684930
    446043 8toi:A (2.64) BS10 PGW ? GO:0005254 ... C7Z7K1 38684930
    446044 8toi:B (2.64) BS03 PGW ? GO:0005254 ... C7Z7K1 38684930
    446045 8toi:B (2.64) BS04 PGW ? GO:0005254 ... C7Z7K1 38684930
    446046 8toi:B (2.64) BS05 PGW ? GO:0005254 ... C7Z7K1 38684930
    446047 8toi:B (2.64) BS06 PGW ? GO:0005254 ... C7Z7K1 38684930
    446048 8toi:B (2.64) BS07 PGW ? GO:0005254 ... C7Z7K1 38684930
    446049 8toi:B (2.64) BS08 PGW ? GO:0005254 ... C7Z7K1 38684930
    446050 8toi:B (2.64) BS09 PGW ? GO:0005254 ... C7Z7K1 38684930
    446051 8toi:B (2.64) BS10 PGW ? GO:0005254 ... C7Z7K1 38684930
    446052 8tol:A (2.85) BS03 PGW ? GO:0005254 ... C7Z7K1 38684930
    446053 8tol:A (2.85) BS04 PGW ? GO:0005254 ... C7Z7K1 38684930
    446054 8tol:A (2.85) BS05 PGW ? GO:0005254 ... C7Z7K1 38684930
    446055 8tol:B (2.85) BS01 PGW ? GO:0005254 ... C7Z7K1 38684930
    446056 8tol:B (2.85) BS04 PGW ? GO:0005254 ... C7Z7K1 38684930
    446057 8tol:B (2.85) BS05 PGW ? GO:0005254 ... C7Z7K1 38684930
    446058 8tom:I (3.1) BS01 1N7 N/A GO:0000345 ... P0A8V2 38951624
    446059 8tom:I (3.1) BS02 1N7 N/A GO:0000345 ... P0A8V2 38951624
    446060 8tom:L (3.1) BS03 1N7 N/A GO:0000345 ... P00579 38951624
    446061 8tos:A (2.35) BS02 FUC 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 38085789
    446062 8tos:A (2.35) BS03 FUC 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 38085789
    446063 8tov:A (2.7) BS01 J6U 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0016032 ... P12497 38054267
    446064 8tov:A (2.7) BS02 J6U 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0016032 ... P12497 38054267
    446065 8tov:B (2.7) BS01 J6U 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0016032 ... P12497 38054267
    446066 8tov:B (2.7) BS02 J6U 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0016032 ... P12497 38054267
    446067 8tov:C (2.7) BS01 J6U 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0016032 ... P12497 38054267
    446068 8tov:C (2.7) BS02 J6U 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0016032 ... P12497 38054267
    446069 8tov:D (2.7) BS01 J6U 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0016032 ... P12497 38054267
    446070 8tov:D (2.7) BS02 J6U 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0016032 ... P12497 38054267
    446071 8tov:E (2.7) BS01 J6U 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0016032 ... P12497 38054267
    446072 8tov:E (2.7) BS02 J6U 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0016032 ... P12497 38054267
    446073 8tov:F (2.7) BS01 J6U 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0016032 ... P12497 38054267
    446074 8tov:F (2.7) BS02 J6U 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0016032 ... P12497 38054267
    446075 8tov:G (2.7) BS01 J6U 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0016032 ... P12497 38054267
    446076 8tov:H (2.7) BS01 J6U 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0016032 ... P12497 38054267
    446077 8tov:H (2.7) BS02 J6U 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0016032 ... P12497 38054267
    446078 8tov:I (2.7) BS01 J6U 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0016032 ... P12497 38054267
    446079 8tov:J (2.7) BS01 J6U 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0016032 ... P12497 38054267
    446080 8tov:J (2.7) BS02 J6U 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0016032 ... P12497 38054267
    446081 8tov:K (2.7) BS01 J6U 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0016032 ... P12497 38054267
    446082 8tov:L (2.7) BS01 J6U 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0016032 ... P12497 38054267
    446083 8tow:A (2.14) BS01 OEX N/A GO:0005506 ... P16033 38879008
    446084 8tow:A (2.14) BS03 CLA N/A GO:0005506 ... P16033 38879008
    446085 8tow:A (2.14) BS04 CLA N/A GO:0005506 ... P16033 38879008
    446086 8tow:A (2.14) BS05 PHO N/A GO:0005506 ... P16033 38879008
    446087 8tow:A (2.14) BS06 CLA N/A GO:0005506 ... P16033 38879008
    446088 8tow:A (2.14) BS07 BCT N/A GO:0005506 ... P16033 38879008
    446089 8tow:A (2.14) BS08 CLA N/A GO:0005506 ... P16033 38879008
    446090 8tow:A (2.14) BS09 CLA N/A GO:0005506 ... P16033 38879008
    446091 8tow:A (2.14) BS10 PHO N/A GO:0005506 ... P16033 38879008
    446092 8tow:B (2.14) BS01 CLA N/A GO:0009523 ... P05429 38879008
    446093 8tow:B (2.14) BS02 CLA N/A GO:0009523 ... P05429 38879008
    446094 8tow:B (2.14) BS03 CLA N/A GO:0009523 ... P05429 38879008
    446095 8tow:B (2.14) BS04 CLA N/A GO:0009523 ... P05429 38879008
    446096 8tow:B (2.14) BS05 CLA N/A GO:0009523 ... P05429 38879008
    446097 8tow:B (2.14) BS06 CLA N/A GO:0009523 ... P05429 38879008
    446098 8tow:B (2.14) BS07 CLA N/A GO:0009523 ... P05429 38879008
    446099 8tow:B (2.14) BS08 CLA N/A GO:0009523 ... P05429 38879008
    446100 8tow:B (2.14) BS09 CLA N/A GO:0009523 ... P05429 38879008
    446101 8tow:B (2.14) BS10 CLA N/A GO:0009523 ... P05429 38879008
    446102 8tow:B (2.14) BS11 CLA N/A GO:0009523 ... P05429 38879008
    446103 8tow:B (2.14) BS12 CLA N/A GO:0009523 ... P05429 38879008
    446104 8tow:B (2.14) BS13 CLA N/A GO:0009523 ... P05429 38879008
    446105 8tow:B (2.14) BS14 CLA N/A GO:0009523 ... P05429 38879008
    446106 8tow:B (2.14) BS15 CLA N/A GO:0009523 ... P05429 38879008
    446107 8tow:B (2.14) BS16 CLA N/A GO:0009523 ... P05429 38879008
    446108 8tow:C (2.14) BS01 OEX N/A GO:0005737 ... P09193 38879008
    446109 8tow:C (2.14) BS02 CLA N/A GO:0005737 ... P09193 38879008
    446110 8tow:C (2.14) BS03 CLA N/A GO:0005737 ... P09193 38879008
    446111 8tow:C (2.14) BS04 CLA N/A GO:0005737 ... P09193 38879008
    446112 8tow:C (2.14) BS05 CLA N/A GO:0005737 ... P09193 38879008
    446113 8tow:C (2.14) BS06 CLA N/A GO:0005737 ... P09193 38879008
    446114 8tow:C (2.14) BS07 CLA N/A GO:0005737 ... P09193 38879008
    446115 8tow:C (2.14) BS08 CLA N/A GO:0005737 ... P09193 38879008
    446116 8tow:C (2.14) BS09 CLA N/A GO:0005737 ... P09193 38879008
    446117 8tow:C (2.14) BS10 CLA N/A GO:0005737 ... P09193 38879008
    446118 8tow:C (2.14) BS11 CLA N/A GO:0005737 ... P09193 38879008
    446119 8tow:C (2.14) BS12 CLA N/A GO:0005737 ... P09193 38879008
    446120 8tow:C (2.14) BS13 CLA N/A GO:0005737 ... P09193 38879008
    446121 8tow:C (2.14) BS14 CLA N/A GO:0005737 ... P09193 38879008
    446122 8tow:D (2.14) BS02 CLA N/A GO:0005506 ... P09192 38879008
    446123 8tow:D (2.14) BS03 PHO N/A GO:0005506 ... P09192 38879008
    446124 8tow:D (2.14) BS04 BCT N/A GO:0005506 ... P09192 38879008
    446125 8tow:D (2.14) BS05 CLA N/A GO:0005506 ... P09192 38879008
    446126 8tow:D (2.14) BS06 CLA N/A GO:0005506 ... P09192 38879008
    446127 8tow:D (2.14) BS07 PHO N/A GO:0005506 ... P09192 38879008
    446128 8tow:D (2.14) BS08 CLA N/A GO:0005506 ... P09192 38879008
    446129 8tow:D (2.14) BS09 CLA N/A GO:0005506 ... P09192 38879008
    446130 8tow:E (2.14) BS01 HEM N/A GO:0005506 ... P09190 38879008
    446131 8tow:F (2.14) BS01 HEM N/A GO:0005506 ... P09191 38879008
    446132 8tow:H (2.14) BS01 CLA N/A GO:0009523 ... P14835 38879008
    446133 8tow:H (2.14) BS02 CLA N/A GO:0009523 ... P14835 38879008
    446134 8tow:H (2.14) BS03 CLA N/A GO:0009523 ... P14835 38879008
    446135 8tow:H (2.14) BS04 CLA N/A GO:0009523 ... P14835 38879008
    446136 8tow:H (2.14) BS05 RRX N/A GO:0009523 ... P14835 38879008
    446137 8tow:I (2.14) BS01 CLA N/A GO:0005737 ... Q54697 38879008
    446138 8tow:I (2.14) BS02 CLA N/A GO:0005737 ... Q54697 38879008
    446139 8tow:K (2.14) BS01 CLA N/A GO:0005737 ... P15819 38879008
    446140 8tow:K (2.14) BS02 CLA N/A GO:0005737 ... P15819 38879008
    446141 8tow:M (2.14) BS01 CLA N/A GO:0005737 ... P72701 38879008
    446142 8tow:V (2.14) BS01 HEM N/A N/A Q55013 38879008
    446143 8tow:X (2.14) BS01 CLA N/A GO:0009523 ... P72575 38879008
    446144 8tow:Z (2.14) BS01 CLA N/A GO:0009523 ... P73528 38879008
    446145 8tow:a (2.14) BS01 OEX N/A GO:0005506 ... P16033 38879008
    446146 8tow:a (2.14) BS03 CLA N/A GO:0005506 ... P16033 38879008
    446147 8tow:a (2.14) BS04 CLA N/A GO:0005506 ... P16033 38879008
    446148 8tow:a (2.14) BS05 PHO N/A GO:0005506 ... P16033 38879008
    446149 8tow:a (2.14) BS06 CLA N/A GO:0005506 ... P16033 38879008
    446150 8tow:a (2.14) BS07 BCT N/A GO:0005506 ... P16033 38879008
    446151 8tow:a (2.14) BS08 CLA N/A GO:0005506 ... P16033 38879008
    446152 8tow:a (2.14) BS09 CLA N/A GO:0005506 ... P16033 38879008
    446153 8tow:a (2.14) BS10 PHO N/A GO:0005506 ... P16033 38879008
    446154 8tow:b (2.14) BS01 CLA N/A GO:0009523 ... P05429 38879008
    446155 8tow:b (2.14) BS02 CLA N/A GO:0009523 ... P05429 38879008
    446156 8tow:b (2.14) BS03 CLA N/A GO:0009523 ... P05429 38879008
    446157 8tow:b (2.14) BS04 CLA N/A GO:0009523 ... P05429 38879008
    446158 8tow:b (2.14) BS05 CLA N/A GO:0009523 ... P05429 38879008
    446159 8tow:b (2.14) BS06 CLA N/A GO:0009523 ... P05429 38879008
    446160 8tow:b (2.14) BS07 CLA N/A GO:0009523 ... P05429 38879008
    446161 8tow:b (2.14) BS08 CLA N/A GO:0009523 ... P05429 38879008
    446162 8tow:b (2.14) BS09 CLA N/A GO:0009523 ... P05429 38879008
    446163 8tow:b (2.14) BS10 CLA N/A GO:0009523 ... P05429 38879008
    446164 8tow:b (2.14) BS11 CLA N/A GO:0009523 ... P05429 38879008
    446165 8tow:b (2.14) BS12 CLA N/A GO:0009523 ... P05429 38879008
    446166 8tow:b (2.14) BS13 CLA N/A GO:0009523 ... P05429 38879008
    446167 8tow:b (2.14) BS14 CLA N/A GO:0009523 ... P05429 38879008
    446168 8tow:b (2.14) BS15 CLA N/A GO:0009523 ... P05429 38879008
    446169 8tow:b (2.14) BS16 CLA N/A GO:0009523 ... P05429 38879008
    446170 8tow:c (2.14) BS01 OEX N/A GO:0005737 ... P09193 38879008
    446171 8tow:c (2.14) BS02 CLA N/A GO:0005737 ... P09193 38879008
    446172 8tow:c (2.14) BS03 CLA N/A GO:0005737 ... P09193 38879008
    446173 8tow:c (2.14) BS04 CLA N/A GO:0005737 ... P09193 38879008
    446174 8tow:c (2.14) BS05 CLA N/A GO:0005737 ... P09193 38879008
    446175 8tow:c (2.14) BS06 CLA N/A GO:0005737 ... P09193 38879008
    446176 8tow:c (2.14) BS07 CLA N/A GO:0005737 ... P09193 38879008
    446177 8tow:c (2.14) BS08 CLA N/A GO:0005737 ... P09193 38879008
    446178 8tow:c (2.14) BS09 CLA N/A GO:0005737 ... P09193 38879008
    446179 8tow:c (2.14) BS10 CLA N/A GO:0005737 ... P09193 38879008
    446180 8tow:c (2.14) BS11 CLA N/A GO:0005737 ... P09193 38879008
    446181 8tow:c (2.14) BS12 CLA N/A GO:0005737 ... P09193 38879008
    446182 8tow:c (2.14) BS13 CLA N/A GO:0005737 ... P09193 38879008
    446183 8tow:c (2.14) BS14 CLA N/A GO:0005737 ... P09193 38879008
    446184 8tow:d (2.14) BS02 CLA N/A GO:0005506 ... P09192 38879008
    446185 8tow:d (2.14) BS03 PHO N/A GO:0005506 ... P09192 38879008
    446186 8tow:d (2.14) BS04 BCT N/A GO:0005506 ... P09192 38879008
    446187 8tow:d (2.14) BS05 CLA N/A GO:0005506 ... P09192 38879008
    446188 8tow:d (2.14) BS06 CLA N/A GO:0005506 ... P09192 38879008
    446189 8tow:d (2.14) BS07 PHO N/A GO:0005506 ... P09192 38879008
    446190 8tow:d (2.14) BS08 CLA N/A GO:0005506 ... P09192 38879008
    446191 8tow:d (2.14) BS09 CLA N/A GO:0005506 ... P09192 38879008
    446192 8tow:e (2.14) BS01 HEM N/A GO:0005506 ... P09190 38879008
    446193 8tow:f (2.14) BS01 HEM N/A GO:0005506 ... P09191 38879008
    446194 8tow:h (2.14) BS01 CLA N/A GO:0009523 ... P14835 38879008
    446195 8tow:h (2.14) BS02 CLA N/A GO:0009523 ... P14835 38879008
    446196 8tow:h (2.14) BS03 CLA N/A GO:0009523 ... P14835 38879008
    446197 8tow:h (2.14) BS04 CLA N/A GO:0009523 ... P14835 38879008
    446198 8tow:h (2.14) BS05 RRX N/A GO:0009523 ... P14835 38879008
    446199 8tow:i (2.14) BS01 CLA N/A GO:0005737 ... Q54697 38879008
    446200 8tow:i (2.14) BS02 CLA N/A GO:0005737 ... Q54697 38879008

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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