Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 460725 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 2175 2176 2177 2178 2179 2180 2181 2182 2183 2184 2185 2186 2187 2188 2189 2190 2191 2192 2193 2194 2195 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    436801 8pn8:K (2.31) BS01 BTI 6.4.1.3 GO:0004658 ... C5AWU5 37983631
    436802 8pn8:L (2.31) BS01 BTI 6.4.1.3 GO:0004658 ... C5AWU5 37983631
    436803 8pn9:A (3.61) BS01 MAN 2.4.99.18 GO:0004576 ... P46977 38670073
    436804 8pn9:A (3.61) BS02 KZB 2.4.99.18 GO:0004576 ... P46977 38670073
    436805 8pn9:A (3.61) BS03 KZB 2.4.99.18 GO:0004576 ... P46977 38670073
    436806 8pn9:A (3.61) BS04 EGY 2.4.99.18 GO:0004576 ... P46977 38670073
    436807 8pn9:A (3.61) BS06 OTP 2.4.99.18 GO:0004576 ... P46977 38670073
    436808 8pn9:A (3.61) BS07 ZXT 2.4.99.18 GO:0004576 ... P46977 38670073
    436809 8pn9:A (3.61) BS08 EGY 2.4.99.18 GO:0004576 ... P46977 38670073
    436810 8pn9:D (3.61) BS01 GLC ? GO:0001824 ... P61803 38670073
    436811 8pn9:F (3.61) BS01 MAN ? GO:0006487 ... P04844 38670073
    436812 8pn9:F (3.61) BS02 EGY ? GO:0006487 ... P04844 38670073
    436813 8pn9:G (3.61) BS01 MAN ? GO:0005789 ... P39656 38670073
    436814 8pn9:G (3.61) BS02 EGY ? GO:0005789 ... P39656 38670073
    436815 8pn9:G (3.61) BS03 KZB ? GO:0005789 ... P39656 38670073
    436816 8pn9:H (3.61) BS01 KZB ? GO:0004579 ... Q9NRP0 38670073
    436817 8pn9:H (3.61) BS02 EGY ? GO:0004579 ... Q9NRP0 38670073
    436818 8pnd:A (1.9) BS01 ZWW 2.5.1.61 GO:0004418 ... P08397 37863644
    436819 8pnd:B (1.9) BS01 ZWW 2.5.1.61 GO:0004418 ... P08397 37863644
    436820 8pnh:A (1.9) BS01 TSA N/A N/A A0AAJ6N664 N/A
    436821 8pnh:A (1.9) BS02 PPY N/A N/A A0AAJ6N664 N/A
    436822 8pnj:A (2.355) BS01 TSA N/A N/A N/A N/A
    436823 8pno:A (2.2) BS01 KQB N/A GO:0000287 ... P0A8Y3 N/A
    436824 8pno:B (2.2) BS01 KQB N/A GO:0000287 ... P0A8Y3 N/A
    436825 8pnq:B (2.88) BS03 2KH 2.7.7.48 GO:0000166 ... M9TLW3 38316757
    436826 8pnt:B (3.46) BS01 MGT ? GO:0000184 ... P52298 38175753
    436827 8pnu:A (2.12) BS01 ABN ? GO:0016020 ... O50216 38744914
    436828 8pnu:A (2.12) BS02 HEM ? GO:0016020 ... O50216 38744914
    436829 8pnu:A (2.12) BS03 HEM ? GO:0016020 ... O50216 38744914
    436830 8pnu:B (2.12) BS01 HEM ? GO:0016020 ... O50216 38744914
    436831 8pnu:B (2.12) BS02 ABN ? GO:0016020 ... O50216 38744914
    436832 8pnu:B (2.12) BS03 HEM ? GO:0016020 ... O50216 38744914
    436833 8pnu:C (2.12) BS01 HEM ? GO:0016020 ... O50216 38744914
    436834 8pnu:C (2.12) BS02 ABN ? GO:0016020 ... O50216 38744914
    436835 8pnu:C (2.12) BS03 HEM ? GO:0016020 ... O50216 38744914
    436836 8pnu:G (2.12) BS01 ABN ? GO:0016020 ... O50216 38744914
    436837 8pnu:G (2.12) BS02 HEM ? GO:0016020 ... O50216 38744914
    436838 8pnu:G (2.12) BS03 HEM ? GO:0016020 ... O50216 38744914
    436839 8pnu:H (2.12) BS01 HEM ? GO:0016020 ... O50216 38744914
    436840 8pnu:H (2.12) BS02 ABN ? GO:0016020 ... O50216 38744914
    436841 8pnu:H (2.12) BS03 HEM ? GO:0016020 ... O50216 38744914
    436842 8pnu:I (2.12) BS01 HEM ? GO:0016020 ... O50216 38744914
    436843 8pnu:I (2.12) BS02 ABN ? GO:0016020 ... O50216 38744914
    436844 8pnu:I (2.12) BS03 HEM ? GO:0016020 ... O50216 38744914
    436845 8pnv:A (2.048) BS01 HEM ? GO:0016020 ... O50216 38744914
    436846 8pnv:A (2.048) BS02 HEM ? GO:0016020 ... O50216 38744914
    436847 8pnv:B (2.048) BS01 HEM ? GO:0016020 ... O50216 38744914
    436848 8pnv:B (2.048) BS02 HEM ? GO:0016020 ... O50216 38744914
    436849 8pnv:C (2.048) BS01 HEM ? GO:0016020 ... O50216 38744914
    436850 8pnv:C (2.048) BS02 HEM ? GO:0016020 ... O50216 38744914
    436851 8pnv:G (2.048) BS01 HEM ? GO:0016020 ... O50216 38744914
    436852 8pnv:G (2.048) BS02 HEM ? GO:0016020 ... O50216 38744914
    436853 8pnv:H (2.048) BS01 HEM ? GO:0016020 ... O50216 38744914
    436854 8pnv:H (2.048) BS02 HEM ? GO:0016020 ... O50216 38744914
    436855 8pnv:I (2.048) BS01 HEM ? GO:0016020 ... O50216 38744914
    436856 8pnv:I (2.048) BS02 HEM ? GO:0016020 ... O50216 38744914
    436857 8pnw:A (1.7) BS01 PLP ? GO:0003824 ... H6RQF3 38003383
    436858 8pnx:A (1.8) BS01 PMP N/A GO:0005829 ... H6RQF3 N/A
    436859 8pny:A (1.8) BS01 ZXN ? GO:0003824 ... H6RQF3 38003383
    436860 8pnz:A (2.51) BS01 2I0 2.7.10.1 N/A P00533 38770784
    436861 8po0:A (2.523) BS01 2I6 2.7.10.1 N/A P00533 38770784
    436862 8po1:A (2.11) BS01 2EI 2.7.10.1 N/A P00533 38770784
    436863 8po2:A (2.28) BS02 26X 2.7.10.1 N/A P00533 38770784
    436864 8po2:B (2.28) BS02 26X 2.7.10.1 N/A P00533 38770784
    436865 8po3:A (2.13) BS01 2II 2.7.10.1 N/A P00533 38770784
    436866 8po4:A (1.621) BS01 26X 2.7.10.1 N/A P00533 38770784
    436867 8po4:B (1.621) BS01 ATP 2.7.10.1 N/A P00533 38770784
    436868 8po7:A (2.26) BS02 ADP 3.6.4.13 GO:0003676 ... P43329 38412313
    436869 8po7:B (2.26) BS01 ADP 3.6.4.13 GO:0003676 ... P43329 38412313
    436870 8po8:A (2.52) BS03 ADP 3.6.4.13 GO:0003676 ... P43329 38412313
    436871 8po8:B (2.52) BS03 ADP 3.6.4.13 GO:0003676 ... P43329 38412313
    436872 8po9:A (2.2) BS01 MAN ? N/A Q24995 37729416
    436873 8po9:B (2.2) BS01 MAN ? N/A Q24995 37729416
    436874 8po9:C (2.2) BS01 MAN ? N/A Q24995 37729416
    436875 8po9:C (2.2) BS04 GLY ? N/A Q24995 37729416
    436876 8po9:D (2.2) BS01 MAN ? N/A Q24995 37729416
    436877 8po9:D (2.2) BS03 GLY ? N/A Q24995 37729416
    436878 8po9:E (2.2) BS03 GLY ? N/A Q24995 37729416
    436879 8po9:F (2.2) BS03 GLY ? N/A Q24995 37729416
    436880 8pob:A (1.74) BS01 ZW0 N/A N/A P00698 38738452
    436881 8pod:A (2.59) BS01 7IO N/A N/A Q04771 N/A
    436882 8poi:A (-1.00) BS01 ZTI ? GO:0003723 ... O75940 37587144
    436883 8poj:A (2.45) BS01 ZUL ? N/A Q15562 37770003
    436884 8pok:A (3.4) BS01 HSM ? GO:0001696 ... P25021 38418462
    436885 8pom:A (1.95) BS01 ZUP ? N/A Q15562 37770003
    436886 8pom:B (1.95) BS01 ZUP ? N/A Q15562 37770003
    436887 8pon:A (2.2) BS01 ZUT ? N/A Q15562 37770003
    436888 8por:A (1.85) BS01 EYT 6.1.1.4 N/A Q5GS31 38985862
    436889 8pos:A (2.137) BS01 7RZ 6.1.1.4 N/A Q5GS31 38985862
    436890 8pos:B (2.137) BS01 7RZ 6.1.1.4 N/A Q5GS31 38985862
    436891 8pot:A (2.149) BS02 7RZ 6.1.1.4 GO:0004812 ... P07813 38985862
    436892 8pou:L (1.65) BS01 NFV 1.12.99.6 GO:0005515 ... P31891 37860641
    436893 8pou:L (1.65) BS03 SF4 1.12.99.6 GO:0005515 ... P31891 37860641
    436894 8pou:S (1.65) BS01 SF4 1.12.99.6 GO:0005515 ... P31892 37860641
    436895 8pou:S (1.65) BS02 F3S 1.12.99.6 GO:0005515 ... P31892 37860641
    436896 8pou:S (1.65) BS03 SF4 1.12.99.6 GO:0005515 ... P31892 37860641
    436897 8pov:L (1.92) BS01 NFU 1.12.99.6 GO:0005515 ... P31891 37860641
    436898 8pov:L (1.92) BS03 SF4 1.12.99.6 GO:0005515 ... P31891 37860641
    436899 8pov:S (1.92) BS01 SF4 1.12.99.6 GO:0005515 ... P31892 37860641
    436900 8pov:S (1.92) BS02 F3S 1.12.99.6 GO:0005515 ... P31892 37860641
    436901 8pov:S (1.92) BS03 SF4 1.12.99.6 GO:0005515 ... P31892 37860641
    436902 8pow:L (1.61) BS01 NFV 1.12.99.6 GO:0005515 ... P31891 37860641
    436903 8pow:S (1.61) BS01 SF4 1.12.99.6 GO:0005515 ... P31892 37860641
    436904 8pow:S (1.61) BS02 F3S 1.12.99.6 GO:0005515 ... P31892 37860641
    436905 8pow:S (1.61) BS03 ER2 1.12.99.6 GO:0005515 ... P31892 37860641
    436906 8pox:L (1.6) BS01 NFU N/A N/A P31891 37860641
    436907 8pox:S (1.6) BS01 SF4 N/A N/A P31892 37860641
    436908 8pox:S (1.6) BS02 F3S N/A N/A P31892 37860641
    436909 8pox:S (1.6) BS03 SF4 N/A N/A P31892 37860641
    436910 8pox:S (1.6) BS04 ER2 N/A N/A P31892 37860641
    436911 8poz:L (1.65) BS01 NFU N/A N/A P31891 37860641
    436912 8poz:S (1.65) BS01 SF4 N/A N/A P31892 37860641
    436913 8poz:S (1.65) BS02 F3S N/A N/A P31892 37860641
    436914 8poz:S (1.65) BS03 35L N/A N/A P31892 37860641
    436915 8poz:S (1.65) BS04 SF3 N/A N/A P31892 37860641
    436916 8pp0:A (1.9) BS02 7QJ ? GO:0003677 ... P19793 38237049
    436917 8pp8:A (1.59) BS01 ANP 2.7.1.127 GO:0016301 ... P23677 38374076
    436918 8pp8:A (1.59) BS02 3IA 2.7.1.127 GO:0016301 ... P23677 38374076
    436919 8pp8:B (1.59) BS01 3IA 2.7.1.127 GO:0016301 ... P23677 38374076
    436920 8pp8:B (1.59) BS02 ANP 2.7.1.127 GO:0016301 ... P23677 38374076
    436921 8pp9:A (1.73) BS01 4IM 2.7.1.127 GO:0016301 ... P23677 38374076
    436922 8pp9:A (1.73) BS02 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    436923 8pp9:B (1.73) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    436924 8pp9:B (1.73) BS02 4IM 2.7.1.127 GO:0016301 ... P23677 38374076
    436925 8ppa:A (1.73) BS01 ANP 2.7.1.127 GO:0016301 ... P23677 38374076
    436926 8ppa:A (1.73) BS02 06G 2.7.1.127 GO:0016301 ... P23677 38374076
    436927 8ppa:B (1.73) BS01 ANP 2.7.1.127 GO:0016301 ... P23677 38374076
    436928 8ppa:B (1.73) BS02 06G 2.7.1.127 GO:0016301 ... P23677 38374076
    436929 8ppb:A (1.8) BS01 3I2 2.7.1.127 GO:0016301 ... P23677 38374076
    436930 8ppb:A (1.8) BS02 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    436931 8ppb:B (1.8) BS01 3I2 2.7.1.127 GO:0016301 ... P23677 38374076
    436932 8ppb:B (1.8) BS02 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    436933 8ppc:A (1.92) BS01 2KM 2.7.1.127 GO:0016301 ... P23677 38374076
    436934 8ppc:A (1.92) BS02 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    436935 8ppc:B (1.92) BS01 2KM 2.7.1.127 GO:0016301 ... P23677 38374076
    436936 8ppc:B (1.92) BS02 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    436937 8ppd:A (1.77) BS01 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    436938 8ppd:A (1.77) BS02 75I 2.7.1.127 GO:0016301 ... P23677 38374076
    436939 8ppd:B (1.77) BS01 75I 2.7.1.127 GO:0016301 ... P23677 38374076
    436940 8ppd:B (1.77) BS02 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    436941 8ppe:A (1.59) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    436942 8ppe:A (1.59) BS02 7I8 2.7.1.127 GO:0016301 ... P23677 38374076
    436943 8ppe:B (1.59) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    436944 8ppe:B (1.59) BS02 7I8 2.7.1.127 GO:0016301 ... P23677 38374076
    436945 8ppf:A (1.85) BS01 ANP 2.7.1.127 GO:0016301 ... P23677 38374076
    436946 8ppf:A (1.85) BS02 6II 2.7.1.127 GO:0016301 ... P23677 38374076
    436947 8ppf:B (1.85) BS01 ANP 2.7.1.127 GO:0016301 ... P23677 38374076
    436948 8ppf:B (1.85) BS02 6II 2.7.1.127 GO:0016301 ... P23677 38374076
    436949 8ppg:A (1.75) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    436950 8ppg:A (1.75) BS02 46I 2.7.1.127 GO:0016301 ... P23677 38374076
    436951 8ppg:B (1.75) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    436952 8ppg:B (1.75) BS02 46I 2.7.1.127 GO:0016301 ... P23677 38374076
    436953 8pph:A (1.7) BS01 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    436954 8pph:A (1.7) BS02 5AI 2.7.1.127 GO:0016301 ... P23677 38374076
    436955 8pph:B (1.7) BS01 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    436956 8ppi:A (1.65) BS01 69I 2.7.1.127 GO:0016301 ... P23677 38374076
    436957 8ppi:A (1.65) BS02 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    436958 8ppi:B (1.65) BS01 69I 2.7.1.127 GO:0016301 ... P23677 38374076
    436959 8ppi:B (1.65) BS02 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    436960 8ppj:A (1.75) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    436961 8ppj:A (1.75) BS02 661 2.7.1.127 GO:0016301 ... P23677 38374076
    436962 8ppj:B (1.75) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    436963 8ppj:B (1.75) BS02 661 2.7.1.127 GO:0016301 ... P23677 38374076
    436964 8ppl:Is (2.65) BS04 GTP ? GO:0001701 ... P20042 37802027
    436965 8ppl:It (2.65) BS02 GTP 3.6.5.3 GO:0000049 ... P41091 37802027
    436966 8ppl:It (2.65) BS04 MET 3.6.5.3 GO:0000049 ... P41091 37802027
    436967 8ppn:A (1.8) BS01 GAL ? GO:0030246 ... P17931 37658813
    436968 8ppn:A (1.8) BS02 YIO ? GO:0030246 ... P17931 37658813
    436969 8ppp:A (2.57) BS01 APC ? N/A A0A1M5ABR5 38269041
    436970 8ppp:B (2.57) BS01 APC ? N/A A0A1M5ABR5 38269041
    436971 8ppw:A (1.53) BS01 86F 3.1.2.-
    3.5.1.-
    3.5.1.124    		 GO:0000785 ... Q99497 38239128
    436972 8ppz:A (1.85) BS01 0AN 5.2.1.8 GO:0000413 ... P62942 N/A
    436973 8ppz:B (1.85) BS01 0AN 2.7.11.1 GO:0044877 ... P42345 N/A
    436974 8pq0:A (1.48) BS01 8RX 3.1.2.-
    3.5.1.-
    3.5.1.124    		 GO:0000785 ... Q99497 38239128
    436975 8pq5:A (4.4) BS01 ATP N/A N/A N/A N/A
    436976 8pq5:A (4.4) BS02 ATP N/A N/A N/A N/A
    436977 8pq5:B (4.4) BS01 ATP N/A N/A N/A N/A
    436978 8pq5:B (4.4) BS02 ATP N/A N/A N/A N/A
    436979 8pq9:A (1.7) BS01 9JI 2.7.10.1 GO:0004672 ... P10721 38167404
    436980 8pq9:C (1.7) BS01 9JI 2.7.10.1 GO:0004672 ... P10721 38167404
    436981 8pqa:A (1.65) BS01 98A 2.7.10.1 GO:0004672 ... P10721 38167404
    436982 8pqa:C (1.65) BS01 98A 2.7.10.1 GO:0004672 ... P10721 38167404
    436983 8pqb:A (1.87) BS01 9XO 2.7.10.1 GO:0004672 ... P10721 38167404
    436984 8pqc:A (1.77) BS01 9OO 2.7.10.1 GO:0004672 ... P10721 38167404
    436985 8pqc:B (1.77) BS01 9OO 2.7.10.1 GO:0004672 ... P10721 38167404
    436986 8pqd:A (1.5) BS01 9VV 2.7.10.1 GO:0004672 ... P10721 38167404
    436987 8pqd:B (1.5) BS01 9VV 2.7.10.1 GO:0004672 ... P10721 38167404
    436988 8pqe:A (2.0) BS01 9WU 2.7.10.1 GO:0004672 ... P10721 38167404
    436989 8pqe:B (2.0) BS01 9WU 2.7.10.1 GO:0004672 ... P10721 38167404
    436990 8pqf:A (1.9) BS01 9KI 2.7.10.1 GO:0004672 ... P10721 38167404
    436991 8pqf:C (1.9) BS01 9KI 2.7.10.1 GO:0004672 ... P10721 38167404
    436992 8pqg:A (2.4) BS01 9JI 2.7.10.1 GO:0004672 ... P10721 38167404
    436993 8pqg:C (2.4) BS01 9JI 2.7.10.1 GO:0004672 ... P10721 38167404
    436994 8pqh:A (2.5) BS01 9JI 2.7.10.1 GO:0004672 ... P16234 38167404
    436995 8pqi:A (2.6) BS01 9OO 2.7.10.1 GO:0004672 ... P16234 38167404
    436996 8pql:C (3.76) BS01 SY8 2.3.2.23 GO:0000209 ... Q712K3 38326650
    436997 8pqn:A (3.8) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 38153885
    436998 8pqn:A (3.8) BS02 978 1.6.5.2 GO:0000209 ... P15559 38153885
    436999 8pqn:B (3.8) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 38153885
    437000 8pqn:B (3.8) BS02 978 1.6.5.2 GO:0000209 ... P15559 38153885
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218