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BioLiP
Download all results in tab-seperated text for 1029 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1001 8wiz:B (2.2) BS02 BCT N/A N/A P02130 39090102
    1002 8wql:A1 (3.5) BS05 BCT N/A N/A N/A N/A
    1003 8wql:AD (3.5) BS05 BCT N/A N/A N/A N/A
    1004 8wql:AE (3.5) BS05 BCT N/A N/A N/A N/A
    1005 8wql:D1 (3.5) BS03 BCT N/A N/A N/A N/A
    1006 8wql:DD (3.5) BS03 BCT N/A N/A N/A N/A
    1007 8wql:DE (3.5) BS03 BCT N/A N/A N/A N/A
    1008 8wql:a1 (3.5) BS05 BCT N/A N/A N/A N/A
    1009 8wql:aD (3.5) BS05 BCT N/A N/A N/A N/A
    1010 8wql:aE (3.5) BS05 BCT N/A N/A N/A N/A
    1011 8wql:d1 (3.5) BS02 BCT N/A N/A N/A N/A
    1012 8wql:dD (3.5) BS02 BCT N/A N/A N/A N/A
    1013 8wql:dE (3.5) BS02 BCT N/A N/A N/A N/A
    1014 8xlp:A (2.57) BS07 BCT N/A GO:0005506 ... A6MVT2 N/A
    1015 8xlp:D (2.57) BS04 BCT N/A GO:0005506 ... A6MVR3 N/A
    1016 8xlp:a (2.57) BS07 BCT N/A GO:0005506 ... A6MVT2 N/A
    1017 8xlp:d (2.57) BS04 BCT N/A GO:0005506 ... A6MVR3 N/A
    1018 8xr6:A (2.53) BS04 BCT N/A GO:0005506 ... A0A222AI41 N/A
    1019 8xr6:D (2.53) BS03 BCT N/A GO:0005506 ... A0A222AI37 N/A
    1020 8xr6:a (2.53) BS04 BCT N/A GO:0005506 ... A0A222AI41 N/A
    1021 8xr6:d (2.53) BS03 BCT N/A GO:0005506 ... A0A222AI37 N/A
    1022 8y85:A (2.73) BS01 BCT N/A GO:0005452 ... P48751 39033175
    1023 8y86:A (2.75) BS01 BCT N/A GO:0005452 ... P48751 39033175
    1024 8zee:A (2.9) BS01 BCT N/A GO:0005506 ... P07753 38890314
    1025 8zee:D (2.9) BS02 BCT N/A GO:0005506 ... P06007 38890314
    1026 9evx:A (1.71) BS10 BCT 1.10.3.9 GO:0005506 ... P0A444 38900892
    1027 9evx:D (1.71) BS07 BCT 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    1028 9evx:a (1.71) BS10 BCT 1.10.3.9 GO:0005506 ... P0A444 38900892
    1029 9evx:d (1.71) BS07 BCT 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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