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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 1029 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    801 7zaz:BBB (2.0) BS05 BCT N/A GO:0004252 ... N/A N/A
    802 7zaz:CCC (2.0) BS01 BCT N/A GO:0004252 ... N/A N/A
    803 7zaz:CCC (2.0) BS02 BCT N/A GO:0004252 ... N/A N/A
    804 7zaz:CCC (2.0) BS03 BCT N/A GO:0004252 ... N/A N/A
    805 7zaz:DDD (2.0) BS02 BCT N/A GO:0004252 ... N/A N/A
    806 7zaz:DDD (2.0) BS03 BCT N/A GO:0004252 ... N/A N/A
    807 7zaz:DDD (2.0) BS04 BCT N/A GO:0004252 ... N/A N/A
    808 7zb0:B (2.47) BS02 BCT N/A GO:0004252 ... N/A N/A
    809 7zb1:C (2.0) BS02 BCT N/A GO:0004252 ... N/A N/A
    810 7zb1:D (2.0) BS02 BCT N/A GO:0004252 ... N/A N/A
    811 7zyy:A (2.12) BS07 BCT N/A GO:0003824 ... N/A 36261450
    812 7zyy:B (2.12) BS07 BCT N/A GO:0003824 ... N/A 36261450
    813 7zyy:C (2.12) BS08 BCT N/A GO:0003824 ... N/A 36261450
    814 7zyy:D (2.12) BS08 BCT N/A GO:0003824 ... N/A 36261450
    815 7zz3:A (2.41) BS08 BCT N/A GO:0003824 ... N/A 36261450
    816 7zz5:A (2.43) BS02 BCT N/A GO:0003824 ... N/A 36261450
    817 8bd3:A (2.73) BS10 BCT 1.10.3.9 GO:0005506 ... W8SIR2 37566050
    818 8bd3:D (2.73) BS06 BCT 1.10.3.9 GO:0005506 ... W8SYD4 37566050
    819 8bd3:a (2.73) BS10 BCT 1.10.3.9 GO:0005506 ... W8SIR2 37566050
    820 8bd3:d (2.73) BS07 BCT 1.10.3.9 GO:0005506 ... W8SYD4 37566050
    821 8bdb:A (1.7) BS03 BCT 4.1.1.39 GO:0000287 ... A7UM67 37291398
    822 8bdb:A (1.7) BS04 BCT 4.1.1.39 GO:0000287 ... A7UM67 37291398
    823 8bdb:A (1.7) BS05 BCT 4.1.1.39 GO:0000287 ... A7UM67 37291398
    824 8bdb:C (1.7) BS03 BCT 4.1.1.39 GO:0000287 ... A7UM67 37291398
    825 8bdb:C (1.7) BS04 BCT 4.1.1.39 GO:0000287 ... A7UM67 37291398
    826 8bdb:E (1.7) BS03 BCT 4.1.1.39 GO:0000287 ... A7UM67 37291398
    827 8bdb:E (1.7) BS04 BCT 4.1.1.39 GO:0000287 ... A7UM67 37291398
    828 8bdb:G (1.7) BS03 BCT 4.1.1.39 GO:0000287 ... A7UM67 37291398
    829 8bdb:G (1.7) BS04 BCT 4.1.1.39 GO:0000287 ... A7UM67 37291398
    830 8bdb:I (1.7) BS03 BCT 4.1.1.39 GO:0000287 ... A7UM67 37291398
    831 8bdb:I (1.7) BS04 BCT 4.1.1.39 GO:0000287 ... A7UM67 37291398
    832 8bdb:K (1.7) BS03 BCT 4.1.1.39 GO:0000287 ... A7UM67 37291398
    833 8bdb:L (1.7) BS01 BCT ? GO:0009507 ... A7UM68 37291398
    834 8bdb:M (1.7) BS03 BCT 4.1.1.39 GO:0000287 ... A7UM67 37291398
    835 8bdb:M (1.7) BS04 BCT 4.1.1.39 GO:0000287 ... A7UM67 37291398
    836 8bdb:M (1.7) BS05 BCT 4.1.1.39 GO:0000287 ... A7UM67 37291398
    837 8bdb:N (1.7) BS01 BCT ? GO:0009507 ... A7UM68 37291398
    838 8c29:A (2.785) BS08 BCT 1.10.3.9 GO:0005506 ... P50155 37550369
    839 8c29:D (2.785) BS06 BCT 1.10.3.9 GO:0005506 ... R4ZGX6 37550369
    840 8c29:a (2.785) BS08 BCT 1.10.3.9 GO:0005506 ... P50155 37550369
    841 8c29:d (2.785) BS06 BCT 1.10.3.9 GO:0005506 ... R4ZGX6 37550369
    842 8ej0:A (2.59) BS03 BCT ? GO:0016829 ... A0A4R3LQ44 36385513
    843 8ej0:A (2.59) BS04 BCT ? GO:0016829 ... A0A4R3LQ44 36385513
    844 8ej0:C (2.59) BS03 BCT ? GO:0016829 ... A0A4R3LQ44 36385513
    845 8ej0:E (2.59) BS03 BCT ? GO:0016829 ... A0A4R3LQ44 36385513
    846 8eqm:A (2.6) BS07 BCT ? GO:0009055 ... B4WKH9 36549647
    847 8eqm:D (2.6) BS04 BCT 1.10.3.9 GO:0005506 ... B4WKI3 36549647
    848 8eqm:a (2.6) BS07 BCT ? GO:0009055 ... B4WKH9 36549647
    849 8eqm:d (2.6) BS04 BCT 1.10.3.9 GO:0005506 ... B4WKI3 36549647
    850 8ez5:A (2.09) BS09 BCT 1.10.3.9 GO:0005506 ... P0A444 37138085
    851 8ez5:D (2.09) BS05 BCT 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    852 8ez5:a (2.09) BS04 BCT 1.10.3.9 GO:0005506 ... P0A444 37138085
    853 8ez5:d (2.09) BS02 BCT 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    854 8f4c:A (2.0) BS09 BCT 1.10.3.9 GO:0005506 ... P0A444 37138085
    855 8f4c:D (2.0) BS05 BCT 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    856 8f4c:a (2.0) BS04 BCT 1.10.3.9 GO:0005506 ... P0A444 37138085
    857 8f4c:d (2.0) BS02 BCT 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    858 8f4d:A (2.15) BS09 BCT 1.10.3.9 GO:0005506 ... P0A444 37138085
    859 8f4d:D (2.15) BS05 BCT 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    860 8f4d:a (2.15) BS09 BCT 1.10.3.9 GO:0005506 ... P0A444 37138085
    861 8f4d:d (2.15) BS06 BCT 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    862 8f4e:A (2.09) BS10 BCT 1.10.3.9 GO:0005506 ... P0A444 37138085
    863 8f4e:D (2.09) BS07 BCT 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    864 8f4e:a (2.09) BS04 BCT 1.10.3.9 GO:0005506 ... P0A444 37138085
    865 8f4e:d (2.09) BS02 BCT 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    866 8f4f:A (2.03) BS03 BCT 1.10.3.9 GO:0005506 ... P0A444 37138085
    867 8f4f:D (2.03) BS02 BCT 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    868 8f4f:a (2.03) BS08 BCT 1.10.3.9 GO:0005506 ... P0A444 37138085
    869 8f4f:d (2.03) BS06 BCT 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    870 8f4g:A (2.03) BS10 BCT 1.10.3.9 GO:0005506 ... P0A444 37138085
    871 8f4g:D (2.03) BS06 BCT 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    872 8f4g:a (2.03) BS09 BCT 1.10.3.9 GO:0005506 ... P0A444 37138085
    873 8f4g:d (2.03) BS06 BCT 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    874 8f4h:A (2.1) BS04 BCT 1.10.3.9 GO:0005506 ... P0A444 37138085
    875 8f4h:D (2.1) BS02 BCT 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    876 8f4h:a (2.1) BS10 BCT 1.10.3.9 GO:0005506 ... P0A444 37138085
    877 8f4h:d (2.1) BS06 BCT 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    878 8f4i:A (2.0) BS09 BCT 1.10.3.9 GO:0005506 ... P0A444 37138085
    879 8f4i:D (2.0) BS06 BCT 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    880 8f4i:a (2.0) BS09 BCT 1.10.3.9 GO:0005506 ... P0A444 37138085
    881 8f4i:d (2.0) BS06 BCT 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    882 8f4j:A (2.0) BS10 BCT 1.10.3.9 GO:0005506 ... P0A444 37138085
    883 8f4j:D (2.0) BS06 BCT 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    884 8f4j:a (2.0) BS04 BCT 1.10.3.9 GO:0005506 ... P0A444 37138085
    885 8f4j:d (2.0) BS02 BCT 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    886 8f4k:A (2.16) BS10 BCT 1.10.3.9 GO:0005506 ... P0A444 37138085
    887 8f4k:D (2.16) BS06 BCT 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    888 8f4k:a (2.16) BS04 BCT 1.10.3.9 GO:0005506 ... P0A444 37138085
    889 8f4k:d (2.16) BS02 BCT 1.10.3.9 GO:0005506 ... Q8CM25 37138085
    890 8gn0:A (2.15) BS11 BCT 1.10.3.9 GO:0005506 ... P51765 37209822
    891 8gn0:D (2.15) BS06 BCT 1.10.3.9 GO:0009523 ... D0VWR8 37209822
    892 8gn0:a (2.15) BS03 BCT 1.10.3.9 GO:0005506 ... P51765 37209822
    893 8gn0:d (2.15) BS02 BCT 1.10.3.9 GO:0009523 ... D0VWR8 37209822
    894 8gn1:A (2.1) BS10 BCT 1.10.3.9 GO:0005506 ... P51765 37209822
    895 8gn1:D (2.1) BS05 BCT 1.10.3.9 GO:0009523 ... D0VWR8 37209822
    896 8gn1:a (2.1) BS03 BCT 1.10.3.9 GO:0005506 ... P51765 37209822
    897 8gn1:d (2.1) BS02 BCT 1.10.3.9 GO:0009523 ... D0VWR8 37209822
    898 8gn2:A (1.95) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 37209822
    899 8gn2:D (1.95) BS05 BCT 1.10.3.9 GO:0009523 ... D0VWR8 37209822
    900 8gn2:a (1.95) BS03 BCT 1.10.3.9 GO:0005506 ... P51765 37209822
    901 8gn2:d (1.95) BS02 BCT 1.10.3.9 GO:0009523 ... D0VWR8 37209822
    902 8gpp:A (2.09) BS01 BCT ? GO:0046872 ... A0A6F8THQ5 N/A
    903 8gpp:B (2.09) BS01 BCT ? GO:0046872 ... A0A6F8THQ5 N/A
    904 8gpp:C (2.09) BS01 BCT ? GO:0046872 ... A0A6F8THQ5 N/A
    905 8hz4:A (3.2) BS02 BCT 6.3.4.14 GO:0005524 ... A9W9X0 38572988
    906 8hz4:B (3.2) BS02 BCT 6.3.4.14 GO:0005524 ... A9W9X0 38572988
    907 8hz4:C (3.2) BS01 BCT 6.3.4.14 GO:0005524 ... A9W9X0 38572988
    908 8hz4:D (3.2) BS01 BCT 6.3.4.14 GO:0005524 ... A9W9X0 38572988
    909 8hz5:A (3.0) BS01 BCT 6.3.4.14 GO:0003989 ... A9WKH8 38572988
    910 8ir5:A (2.15) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    911 8ir5:D (2.15) BS07 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    912 8ir5:a (2.15) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    913 8ir5:d (2.15) BS07 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    914 8ir6:A (2.2) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    915 8ir6:D (2.2) BS07 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    916 8ir6:a (2.2) BS02 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    917 8ir6:d (2.2) BS02 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    918 8ir7:A (2.25) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    919 8ir7:D (2.25) BS07 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    920 8ir7:a (2.25) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    921 8ir7:d (2.25) BS07 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    922 8ir8:A (2.25) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    923 8ir8:D (2.25) BS07 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    924 8ir8:a (2.25) BS08 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    925 8ir8:d (2.25) BS06 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    926 8ir9:A (2.2) BS08 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    927 8ir9:D (2.2) BS05 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    928 8ir9:a (2.2) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    929 8ir9:d (2.2) BS07 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    930 8ira:A (2.2) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    931 8ira:D (2.2) BS07 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    932 8ira:a (2.2) BS08 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    933 8ira:d (2.2) BS06 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    934 8irb:A (2.3) BS08 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    935 8irb:D (2.3) BS05 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    936 8irb:a (2.3) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    937 8irb:d (2.3) BS07 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    938 8irc:A (2.25) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    939 8irc:D (2.25) BS07 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    940 8irc:a (2.25) BS02 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    941 8irc:d (2.25) BS02 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    942 8ird:A (2.3) BS07 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    943 8ird:D (2.3) BS04 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    944 8ird:a (2.3) BS08 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    945 8ird:d (2.3) BS06 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    946 8ire:A (2.25) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    947 8ire:D (2.25) BS07 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    948 8ire:a (2.25) BS08 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    949 8ire:d (2.25) BS06 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    950 8irf:A (2.25) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    951 8irf:D (2.25) BS07 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    952 8irf:a (2.25) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    953 8irf:d (2.25) BS07 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    954 8irg:A (2.3) BS07 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    955 8irg:D (2.3) BS04 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    956 8irg:a (2.3) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    957 8irg:d (2.3) BS07 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    958 8irh:A (2.25) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    959 8irh:D (2.25) BS06 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    960 8irh:a (2.25) BS10 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    961 8irh:d (2.25) BS07 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    962 8iri:A (2.25) BS10 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    963 8iri:D (2.25) BS07 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    964 8iri:a (2.25) BS10 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    965 8iri:d (2.25) BS07 BCT 1.10.3.9 GO:0009523 ... D0VWR8 38297122
    966 8iwh:A (2.68) BS07 BCT 1.10.3.9 GO:0005506 ... A0T0W2 37878698
    967 8iwh:D (2.68) BS04 BCT 1.10.3.9 GO:0005506 ... A0T0T0 37878698
    968 8iwh:a (2.68) BS02 BCT 1.10.3.9 GO:0005506 ... A0T0W2 37878698
    969 8iwh:d (2.68) BS05 BCT 1.10.3.9 GO:0005506 ... A0T0T0 37878698
    970 8j5k:D (2.93) BS07 BCT 1.10.3.9 GO:0005506 ... A0A679C012 38071196
    971 8j5k:d (2.93) BS07 BCT 1.10.3.9 GO:0005506 ... A0A679C012 38071196
    972 8kde:A (2.6) BS05 BCT N/A GO:0005506 ... P07753 38890314
    973 8kde:D (2.6) BS08 BCT N/A GO:0005506 ... P06007 38890314
    974 8pg0:A (2.97) BS01 BCT ? GO:0004867 ... Q9NPD5 37723174
    975 8pz0:A (1.8) BS01 BCT 3.4.11.1
    3.4.11.10    		 GO:0004177 ... Q02RY8 37924287
    976 8pzm:A (1.7) BS02 BCT 3.4.11.1
    3.4.11.10    		 GO:0004177 ... Q02RY8 37924287
    977 8pzy:A (1.97) BS01 BCT 3.4.11.1
    3.4.11.10    		 GO:0004177 ... Q02RY8 37924287
    978 8pzy:B (1.97) BS01 BCT 3.4.11.1
    3.4.11.10    		 GO:0004177 ... Q02RY8 37924287
    979 8pzy:C (1.97) BS01 BCT 3.4.11.1
    3.4.11.10    		 GO:0004177 ... Q02RY8 37924287
    980 8pzy:D (1.97) BS01 BCT 3.4.11.1
    3.4.11.10    		 GO:0004177 ... Q02RY8 37924287
    981 8pzy:E (1.97) BS01 BCT 3.4.11.1
    3.4.11.10    		 GO:0004177 ... Q02RY8 37924287
    982 8pzy:F (1.97) BS01 BCT 3.4.11.1
    3.4.11.10    		 GO:0004177 ... Q02RY8 37924287
    983 8r2i:D (2.9) BS08 BCT 1.10.3.9 GO:0005506 ... P06007 38322422
    984 8sie:C (2.7) BS07 BCT ? GO:0005886 ... I3L8V6 38184688
    985 8sie:C (2.7) BS08 BCT ? GO:0005886 ... I3L8V6 38184688
    986 8sie:D (2.7) BS07 BCT ? GO:0005886 ... I3L8V6 38184688
    987 8sie:D (2.7) BS08 BCT ? GO:0005886 ... I3L8V6 38184688
    988 8thm:D (2.3) BS03 BCT 4.2.1.1 N/A B5ILN4 38728392
    989 8thm:F (2.3) BS01 BCT 4.2.1.1 N/A B5ILN4 38728392
    990 8tow:A (2.14) BS07 BCT N/A GO:0005506 ... P16033 38879008
    991 8tow:D (2.14) BS04 BCT N/A GO:0005506 ... P09192 38879008
    992 8tow:a (2.14) BS07 BCT N/A GO:0005506 ... P16033 38879008
    993 8tow:d (2.14) BS04 BCT N/A GO:0005506 ... P09192 38879008
    994 8w7x:A (2.2) BS02 BCT N/A N/A N/A N/A
    995 8w7x:B (2.2) BS02 BCT N/A N/A N/A N/A
    996 8w7x:C (2.2) BS02 BCT N/A N/A N/A N/A
    997 8w7x:D (2.2) BS02 BCT N/A N/A N/A N/A
    998 8wb4:A (2.47) BS08 BCT 1.10.3.9 GO:0005506 ... A0A222AI41 38806516
    999 8wb4:a (2.47) BS06 BCT 1.10.3.9 GO:0005506 ... A0A222AI41 38806516
    1000 8wes:A (1.45) BS02 BCT N/A N/A P00918 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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