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BioLiP
Download all results in tab-seperated text for 713946 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    710001 8xok:A (2.84) BS07 DU0 N/A GO:0001409 ... O15439 38886124
    710002 8xok:A (2.84) BS08 DU0 N/A GO:0001409 ... O15439 38886124
    710003 8xok:A (2.84) BS09 DU0 N/A GO:0001409 ... O15439 38886124
    710004 8xol:A (3.02) BS01 ANP N/A GO:0001409 ... O15439 38886124
    710005 8xol:A (3.02) BS02 DU0 N/A GO:0001409 ... O15439 38886124
    710006 8xol:A (3.02) BS03 DU0 N/A GO:0001409 ... O15439 38886124
    710007 8xol:A (3.02) BS04 DU0 N/A GO:0001409 ... O15439 38886124
    710008 8xom:A (3.05) BS01 ANP N/A GO:0001409 ... O15439 38886124
    710009 8xom:A (3.05) BS02 MTX N/A GO:0001409 ... O15439 38886124
    710010 8xom:A (3.05) BS03 DU0 N/A GO:0001409 ... O15439 38886124
    710011 8xom:A (3.05) BS04 DU0 N/A GO:0001409 ... O15439 38886124
    710012 8xom:A (3.05) BS05 DU0 N/A GO:0001409 ... O15439 38886124
    710013 8xom:A (3.05) BS06 DU0 N/A GO:0001409 ... O15439 38886124
    710014 8xom:A (3.05) BS07 DU0 N/A GO:0001409 ... O15439 38886124
    710015 8xom:A (3.05) BS08 MG N/A GO:0001409 ... O15439 38886124
    710016 8xop:A (2.8) BS01 peptide 3.4.21.92 GO:0004176 ... A0A5B9BGY8 38501868
    710017 8xop:B (2.8) BS01 peptide 3.4.21.92 GO:0004176 ... A0A5B9BGY8 38501868
    710018 8xop:B (2.8) BS02 peptide 3.4.21.92 GO:0004176 ... A0A5B9BGY8 38501868
    710019 8xop:C (2.8) BS01 peptide 3.4.21.92 GO:0004176 ... A0A5B9BGY8 38501868
    710020 8xop:C (2.8) BS02 peptide 3.4.21.92 GO:0004176 ... A0A5B9BGY8 38501868
    710021 8xop:D (2.8) BS01 peptide 3.4.21.92 GO:0004176 ... A0A5B9BGY8 38501868
    710022 8xop:D (2.8) BS02 peptide 3.4.21.92 GO:0004176 ... A0A5B9BGY8 38501868
    710023 8xop:E (2.8) BS01 peptide 3.4.21.92 GO:0004176 ... A0A5B9BGY8 38501868
    710024 8xop:E (2.8) BS02 peptide 3.4.21.92 GO:0004176 ... A0A5B9BGY8 38501868
    710025 8xop:F (2.8) BS01 peptide 3.4.21.92 GO:0004176 ... A0A5B9BGY8 38501868
    710026 8xop:F (2.8) BS02 peptide 3.4.21.92 GO:0004176 ... A0A5B9BGY8 38501868
    710027 8xop:G (2.8) BS01 peptide 3.4.21.92 GO:0004176 ... A0A5B9BGY8 38501868
    710028 8xop:G (2.8) BS02 peptide 3.4.21.92 GO:0004176 ... A0A5B9BGY8 38501868
    710029 8xop:H (2.8) BS01 peptide 3.4.21.92 GO:0004176 ... A0A5B9BIX9 38501868
    710030 8xop:H (2.8) BS02 peptide 3.4.21.92 GO:0004176 ... A0A5B9BIX9 38501868
    710031 8xop:I (2.8) BS01 peptide 3.4.21.92 GO:0004176 ... A0A5B9BIX9 38501868
    710032 8xop:I (2.8) BS02 peptide 3.4.21.92 GO:0004176 ... A0A5B9BIX9 38501868
    710033 8xop:J (2.8) BS01 peptide 3.4.21.92 GO:0004176 ... A0A5B9BIX9 38501868
    710034 8xop:J (2.8) BS02 peptide 3.4.21.92 GO:0004176 ... A0A5B9BIX9 38501868
    710035 8xop:K (2.8) BS01 peptide 3.4.21.92 GO:0004176 ... A0A5B9BIX9 38501868
    710036 8xop:K (2.8) BS02 peptide 3.4.21.92 GO:0004176 ... A0A5B9BIX9 38501868
    710037 8xop:L (2.8) BS01 peptide 3.4.21.92 GO:0004176 ... A0A5B9BIX9 38501868
    710038 8xop:L (2.8) BS02 peptide 3.4.21.92 GO:0004176 ... A0A5B9BIX9 38501868
    710039 8xop:M (2.8) BS01 peptide 3.4.21.92 GO:0004176 ... A0A5B9BIX9 38501868
    710040 8xop:M (2.8) BS02 peptide 3.4.21.92 GO:0004176 ... A0A5B9BIX9 38501868
    710041 8xop:N (2.8) BS01 peptide 3.4.21.92 GO:0004176 ... A0A5B9BIX9 38501868
    710042 8xop:N (2.8) BS02 peptide 3.4.21.92 GO:0004176 ... A0A5B9BIX9 38501868
    710043 8xov:A (2.55) BS01 ANP 2.7.11.1 GO:0004672 ... Q15418 N/A
    710044 8xox:A (1.9) BS01 YAM 2.7.10.2 GO:0004672 ... Q14289 N/A
    710045 8xp5:A (2.55) BS01 ZN ? GO:0000976 ... P04637
    Q07817    		 N/A
    710046 8xp5:B (2.55) BS01 ZN ? GO:0000976 ... P04637
    Q07817    		 N/A
    710047 8xpn:A (2.1) BS01 ZN 3.4.19.12 GO:0004843 ... P40818 N/A
    710048 8xpn:B (2.1) BS01 ZN 3.4.19.12 GO:0004843 ... P40818 N/A
    710049 8xpn:C (2.1) BS01 ZN 3.4.19.12 GO:0004843 ... P40818 N/A
    710050 8xpu:B (3.3) BS01 VRW N/A GO:0002720 ... Q01650 38956038
    710051 8xpv:A (1.55) BS01 4Z5 2.7.10.1 GO:0004672 ... P29317 N/A
    710052 8xq7:A (3.15) BS01 CMP N/A GO:0005886 ... A3RL54 38957574
    710053 8xq7:B (3.15) BS01 CMP N/A GO:0005886 ... A3RL54 38957574
    710054 8xq8:A (3.35) BS01 CMP N/A GO:0005886 ... A3RL54 38957574
    710055 8xql:R (2.99) BS01 GOQ N/A GO:0001580 ... Q59310
    Q9NYV8    		 38776963
    710056 8xql:R (2.99) BS02 GOQ N/A GO:0001580 ... Q59310
    Q9NYV8    		 38776963
    710057 8xql:R (2.99) BS03 CLR N/A GO:0001580 ... Q59310
    Q9NYV8    		 38776963
    710058 8xqn:R (3.05) BS01 GOQ N/A GO:0001580 ... Q59310
    Q9NYV8    		 38776963
    710059 8xqn:R (3.05) BS02 CLR N/A GO:0001580 ... Q59310
    Q9NYV8    		 38776963
    710060 8xqo:R (2.77) BS01 GOQ N/A GO:0001580 ... Q59310
    Q9NYV8    		 38776963
    710061 8xqo:R (2.77) BS02 CLR N/A GO:0001580 ... Q59310
    Q9NYV8    		 38776963
    710062 8xqp:R (3.29) BS01 GOQ N/A GO:0001580 ... Q59310
    Q9NYV8    		 38776963
    710063 8xqp:R (3.29) BS02 CLR N/A GO:0001580 ... Q59310
    Q9NYV8    		 38776963
    710064 8xqr:R (3.2) BS01 FLF N/A GO:0001580 ... Q59310
    Q9NYV8    		 38776963
    710065 8xqs:R (3.3) BS01 FLF N/A GO:0001580 ... Q59310
    Q9NYV8    		 38776963
    710066 8xqs:R (3.3) BS02 CLR N/A GO:0001580 ... Q59310
    Q9NYV8    		 38776963
    710067 8xqt:R (2.94) BS01 CLR N/A GO:0001580 ... Q59310
    Q9NYV8    		 38776963
    710068 8xqt:R (2.94) BS02 CLR N/A GO:0001580 ... Q59310
    Q9NYV8    		 38776963
    710069 8xr6:A (2.53) BS01 peptide N/A GO:0005506 ... A0A222AI41 N/A
    710070 8xr6:A (2.53) BS02 OEX N/A GO:0005506 ... A0A222AI41 N/A
    710071 8xr6:A (2.53) BS03 FE2 N/A GO:0005506 ... A0A222AI41 N/A
    710072 8xr6:A (2.53) BS04 BCT N/A GO:0005506 ... A0A222AI41 N/A
    710073 8xr6:A (2.53) BS05 CLA N/A GO:0005506 ... A0A222AI41 N/A
    710074 8xr6:A (2.53) BS06 CLA N/A GO:0005506 ... A0A222AI41 N/A
    710075 8xr6:A (2.53) BS07 PHO N/A GO:0005506 ... A0A222AI41 N/A
    710076 8xr6:A (2.53) BS08 CLA N/A GO:0005506 ... A0A222AI41 N/A
    710077 8xr6:A (2.53) BS09 8CT N/A GO:0005506 ... A0A222AI41 N/A
    710078 8xr6:A (2.53) BS10 CLA N/A GO:0005506 ... A0A222AI41 N/A
    710079 8xr6:A (2.53) BS11 CLA N/A GO:0005506 ... A0A222AI41 N/A
    710080 8xr6:A (2.53) BS12 PHO N/A GO:0005506 ... A0A222AI41 N/A
    710081 8xr6:B (2.53) BS01 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710082 8xr6:B (2.53) BS02 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710083 8xr6:B (2.53) BS03 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710084 8xr6:B (2.53) BS04 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710085 8xr6:B (2.53) BS05 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710086 8xr6:B (2.53) BS06 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710087 8xr6:B (2.53) BS07 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710088 8xr6:B (2.53) BS08 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710089 8xr6:B (2.53) BS09 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710090 8xr6:B (2.53) BS10 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710091 8xr6:B (2.53) BS11 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710092 8xr6:B (2.53) BS12 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710093 8xr6:B (2.53) BS13 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710094 8xr6:B (2.53) BS14 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710095 8xr6:B (2.53) BS15 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710096 8xr6:B (2.53) BS16 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710097 8xr6:B (2.53) BS17 8CT N/A GO:0009523 ... A0A222AIE3 N/A
    710098 8xr6:B (2.53) BS18 8CT N/A GO:0009523 ... A0A222AIE3 N/A
    710099 8xr6:B (2.53) BS19 8CT N/A GO:0009523 ... A0A222AIE3 N/A
    710100 8xr6:C (2.53) BS01 OEX N/A GO:0005737 ... A0A222AI36 N/A
    710101 8xr6:C (2.53) BS02 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710102 8xr6:C (2.53) BS03 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710103 8xr6:C (2.53) BS04 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710104 8xr6:C (2.53) BS05 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710105 8xr6:C (2.53) BS06 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710106 8xr6:C (2.53) BS07 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710107 8xr6:C (2.53) BS08 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710108 8xr6:C (2.53) BS09 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710109 8xr6:C (2.53) BS10 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710110 8xr6:C (2.53) BS11 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710111 8xr6:C (2.53) BS12 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710112 8xr6:C (2.53) BS13 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710113 8xr6:C (2.53) BS14 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710114 8xr6:C (2.53) BS15 8CT N/A GO:0005737 ... A0A222AI36 N/A
    710115 8xr6:C (2.53) BS16 8CT N/A GO:0005737 ... A0A222AI36 N/A
    710116 8xr6:C (2.53) BS17 8CT N/A GO:0005737 ... A0A222AI36 N/A
    710117 8xr6:D (2.53) BS01 peptide N/A GO:0005506 ... A0A222AI37 N/A
    710118 8xr6:D (2.53) BS02 FE2 N/A GO:0005506 ... A0A222AI37 N/A
    710119 8xr6:D (2.53) BS03 BCT N/A GO:0005506 ... A0A222AI37 N/A
    710120 8xr6:D (2.53) BS04 CLA N/A GO:0005506 ... A0A222AI37 N/A
    710121 8xr6:D (2.53) BS05 CLA N/A GO:0005506 ... A0A222AI37 N/A
    710122 8xr6:D (2.53) BS06 PHO N/A GO:0005506 ... A0A222AI37 N/A
    710123 8xr6:D (2.53) BS07 CLA N/A GO:0005506 ... A0A222AI37 N/A
    710124 8xr6:D (2.53) BS08 CLA N/A GO:0005506 ... A0A222AI37 N/A
    710125 8xr6:D (2.53) BS09 PHO N/A GO:0005506 ... A0A222AI37 N/A
    710126 8xr6:D (2.53) BS10 CLA N/A GO:0005506 ... A0A222AI37 N/A
    710127 8xr6:D (2.53) BS11 CLA N/A GO:0005506 ... A0A222AI37 N/A
    710128 8xr6:D (2.53) BS12 8CT N/A GO:0005506 ... A0A222AI37 N/A
    710129 8xr6:E (2.53) BS01 peptide N/A GO:0005506 ... A0A222AI74 N/A
    710130 8xr6:E (2.53) BS02 HEM N/A GO:0005506 ... A0A222AI74 N/A
    710131 8xr6:H (2.53) BS01 CLA N/A GO:0009523 ... A0A222AIE4 N/A
    710132 8xr6:H (2.53) BS02 CLA N/A GO:0009523 ... A0A222AIE4 N/A
    710133 8xr6:H (2.53) BS03 CLA N/A GO:0009523 ... A0A222AIE4 N/A
    710134 8xr6:H (2.53) BS04 CLA N/A GO:0009523 ... A0A222AIE4 N/A
    710135 8xr6:H (2.53) BS05 CLA N/A GO:0009523 ... A0A222AIE4 N/A
    710136 8xr6:H (2.53) BS06 8CT N/A GO:0009523 ... A0A222AIE4 N/A
    710137 8xr6:I (2.53) BS01 CLA N/A GO:0005737 ... A0A222AI80 N/A
    710138 8xr6:I (2.53) BS02 CLA N/A GO:0005737 ... A0A222AI80 N/A
    710139 8xr6:J (2.53) BS01 peptide N/A GO:0009523 ... A0A222AI54 N/A
    710140 8xr6:K (2.53) BS01 CLA N/A GO:0005737 ... A0A222AIA0 N/A
    710141 8xr6:K (2.53) BS02 8CT N/A GO:0005737 ... A0A222AIA0 N/A
    710142 8xr6:K (2.53) BS03 8CT N/A GO:0005737 ... A0A222AIA0 N/A
    710143 8xr6:X (2.53) BS01 CLA N/A GO:0009523 ... A0A222AI61 N/A
    710144 8xr6:Y (2.53) BS01 8CT N/A GO:0009523 ... A0A222AI69 N/A
    710145 8xr6:Z (2.53) BS01 CLA N/A GO:0009523 ... A0A222AI96 N/A
    710146 8xr6:a (2.53) BS01 peptide N/A GO:0005506 ... A0A222AI41 N/A
    710147 8xr6:a (2.53) BS02 OEX N/A GO:0005506 ... A0A222AI41 N/A
    710148 8xr6:a (2.53) BS03 FE2 N/A GO:0005506 ... A0A222AI41 N/A
    710149 8xr6:a (2.53) BS04 BCT N/A GO:0005506 ... A0A222AI41 N/A
    710150 8xr6:a (2.53) BS05 CLA N/A GO:0005506 ... A0A222AI41 N/A
    710151 8xr6:a (2.53) BS06 CLA N/A GO:0005506 ... A0A222AI41 N/A
    710152 8xr6:a (2.53) BS07 PHO N/A GO:0005506 ... A0A222AI41 N/A
    710153 8xr6:a (2.53) BS08 CLA N/A GO:0005506 ... A0A222AI41 N/A
    710154 8xr6:a (2.53) BS09 8CT N/A GO:0005506 ... A0A222AI41 N/A
    710155 8xr6:a (2.53) BS10 CLA N/A GO:0005506 ... A0A222AI41 N/A
    710156 8xr6:a (2.53) BS11 CLA N/A GO:0005506 ... A0A222AI41 N/A
    710157 8xr6:a (2.53) BS12 PHO N/A GO:0005506 ... A0A222AI41 N/A
    710158 8xr6:b (2.53) BS01 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710159 8xr6:b (2.53) BS02 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710160 8xr6:b (2.53) BS03 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710161 8xr6:b (2.53) BS04 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710162 8xr6:b (2.53) BS05 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710163 8xr6:b (2.53) BS06 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710164 8xr6:b (2.53) BS07 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710165 8xr6:b (2.53) BS08 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710166 8xr6:b (2.53) BS09 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710167 8xr6:b (2.53) BS10 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710168 8xr6:b (2.53) BS11 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710169 8xr6:b (2.53) BS12 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710170 8xr6:b (2.53) BS13 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710171 8xr6:b (2.53) BS14 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710172 8xr6:b (2.53) BS15 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710173 8xr6:b (2.53) BS16 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    710174 8xr6:b (2.53) BS17 8CT N/A GO:0009523 ... A0A222AIE3 N/A
    710175 8xr6:b (2.53) BS18 8CT N/A GO:0009523 ... A0A222AIE3 N/A
    710176 8xr6:b (2.53) BS19 8CT N/A GO:0009523 ... A0A222AIE3 N/A
    710177 8xr6:c (2.53) BS01 OEX N/A GO:0005737 ... A0A222AI36 N/A
    710178 8xr6:c (2.53) BS02 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710179 8xr6:c (2.53) BS03 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710180 8xr6:c (2.53) BS04 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710181 8xr6:c (2.53) BS05 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710182 8xr6:c (2.53) BS06 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710183 8xr6:c (2.53) BS07 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710184 8xr6:c (2.53) BS08 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710185 8xr6:c (2.53) BS09 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710186 8xr6:c (2.53) BS10 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710187 8xr6:c (2.53) BS11 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710188 8xr6:c (2.53) BS12 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710189 8xr6:c (2.53) BS13 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710190 8xr6:c (2.53) BS14 CLA N/A GO:0005737 ... A0A222AI36 N/A
    710191 8xr6:c (2.53) BS15 8CT N/A GO:0005737 ... A0A222AI36 N/A
    710192 8xr6:c (2.53) BS16 8CT N/A GO:0005737 ... A0A222AI36 N/A
    710193 8xr6:c (2.53) BS17 8CT N/A GO:0005737 ... A0A222AI36 N/A
    710194 8xr6:d (2.53) BS01 peptide N/A GO:0005506 ... A0A222AI37 N/A
    710195 8xr6:d (2.53) BS02 FE2 N/A GO:0005506 ... A0A222AI37 N/A
    710196 8xr6:d (2.53) BS03 BCT N/A GO:0005506 ... A0A222AI37 N/A
    710197 8xr6:d (2.53) BS04 CLA N/A GO:0005506 ... A0A222AI37 N/A
    710198 8xr6:d (2.53) BS05 CLA N/A GO:0005506 ... A0A222AI37 N/A
    710199 8xr6:d (2.53) BS06 PHO N/A GO:0005506 ... A0A222AI37 N/A
    710200 8xr6:d (2.53) BS07 CLA N/A GO:0005506 ... A0A222AI37 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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