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BioLiP
Download all results in tab-seperated text for 713946 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    35601 1qgh:C (2.35) BS02 FE 1.16.-.- GO:0005737 ... P80725 10625425
    35602 1qgh:D (2.35) BS01 FE 1.16.-.- GO:0005737 ... P80725 10625425
    35603 1qgh:D (2.35) BS02 FE 1.16.-.- GO:0005737 ... P80725 10625425
    35604 1qgh:E (2.35) BS01 FE 1.16.-.- GO:0005737 ... P80725 10625425
    35605 1qgh:E (2.35) BS02 FE 1.16.-.- GO:0005737 ... P80725 10625425
    35606 1qgh:F (2.35) BS01 FE 1.16.-.- GO:0005737 ... P80725 10625425
    35607 1qgh:F (2.35) BS02 FE 1.16.-.- GO:0005737 ... P80725 10625425
    35608 1qgh:G (2.35) BS01 FE 1.16.-.- GO:0005737 ... P80725 10625425
    35609 1qgh:G (2.35) BS02 FE 1.16.-.- GO:0005737 ... P80725 10625425
    35610 1qgh:H (2.35) BS01 FE 1.16.-.- GO:0005737 ... P80725 10625425
    35611 1qgh:H (2.35) BS02 FE 1.16.-.- GO:0005737 ... P80725 10625425
    35612 1qgh:I (2.35) BS01 FE 1.16.-.- GO:0005737 ... P80725 10625425
    35613 1qgh:I (2.35) BS02 FE 1.16.-.- GO:0005737 ... P80725 10625425
    35614 1qgh:J (2.35) BS01 FE 1.16.-.- GO:0005737 ... P80725 10625425
    35615 1qgh:J (2.35) BS02 FE 1.16.-.- GO:0005737 ... P80725 10625425
    35616 1qgh:K (2.35) BS01 FE 1.16.-.- GO:0005737 ... P80725 10625425
    35617 1qgh:K (2.35) BS02 FE 1.16.-.- GO:0005737 ... P80725 10625425
    35618 1qgh:L (2.35) BS01 FE 1.16.-.- GO:0005737 ... P80725 10625425
    35619 1qgh:L (2.35) BS02 FE 1.16.-.- GO:0005737 ... P80725 10625425
    35620 1qgj:A (1.9) BS01 CA 1.11.1.7 GO:0004601 ... Q39034 10713531
    35621 1qgj:A (1.9) BS02 CA 1.11.1.7 GO:0004601 ... Q39034 10713531
    35622 1qgj:A (1.9) BS03 HEM 1.11.1.7 GO:0004601 ... Q39034 10713531
    35623 1qgj:A (1.9) BS04 GSH 1.11.1.7 GO:0004601 ... Q39034 10713531
    35624 1qgj:B (1.9) BS01 CA 1.11.1.7 GO:0004601 ... Q39034 10713531
    35625 1qgj:B (1.9) BS02 CA 1.11.1.7 GO:0004601 ... Q39034 10713531
    35626 1qgj:B (1.9) BS03 HEM 1.11.1.7 GO:0004601 ... Q39034 10713531
    35627 1qgj:B (1.9) BS04 GSH 1.11.1.7 GO:0004601 ... Q39034 10713531
    35628 1qgn:A (2.9) BS01 PLP 4.2.99.9 GO:0003962 ... Q9ZPL5 10438597
    35629 1qgn:A (2.9) BS02 PLP 4.2.99.9 GO:0003962 ... Q9ZPL5 10438597
    35630 1qgn:B (2.9) BS01 PLP 4.2.99.9 GO:0003962 ... Q9ZPL5 10438597
    35631 1qgn:B (2.9) BS02 PLP 4.2.99.9 GO:0003962 ... Q9ZPL5 10438597
    35632 1qgn:C (2.9) BS01 PLP 4.2.99.9 GO:0003962 ... Q9ZPL5 10438597
    35633 1qgn:C (2.9) BS02 PLP 4.2.99.9 GO:0003962 ... Q9ZPL5 10438597
    35634 1qgn:D (2.9) BS01 PLP 4.2.99.9 GO:0003962 ... Q9ZPL5 10438597
    35635 1qgn:D (2.9) BS02 PLP 4.2.99.9 GO:0003962 ... Q9ZPL5 10438597
    35636 1qgn:E (2.9) BS01 PLP 4.2.99.9 GO:0003962 ... Q9ZPL5 10438597
    35637 1qgn:E (2.9) BS02 PLP 4.2.99.9 GO:0003962 ... Q9ZPL5 10438597
    35638 1qgn:F (2.9) BS01 PLP 4.2.99.9 GO:0003962 ... Q9ZPL5 10438597
    35639 1qgn:F (2.9) BS02 PLP 4.2.99.9 GO:0003962 ... Q9ZPL5 10438597
    35640 1qgn:G (2.9) BS01 PLP 4.2.99.9 GO:0003962 ... Q9ZPL5 10438597
    35641 1qgn:G (2.9) BS02 PLP 4.2.99.9 GO:0003962 ... Q9ZPL5 10438597
    35642 1qgn:H (2.9) BS01 PLP 4.2.99.9 GO:0003962 ... Q9ZPL5 10438597
    35643 1qgn:H (2.9) BS02 PLP 4.2.99.9 GO:0003962 ... Q9ZPL5 10438597
    35644 1qgr:A (2.3) BS01 peptide ? GO:0003723 ... Q14974 10353244
    35645 1qgu:A (1.6) BS01 CFM 1.18.6.1 GO:0005524 ... P00466 10525412
    35646 1qgu:A (1.6) BS02 CLF 1.18.6.1 GO:0005524 ... P00466 10525412
    35647 1qgu:B (1.6) BS01 CLF 1.18.6.1 GO:0005524 ... P09772 10525412
    35648 1qgu:B (1.6) BS02 MG 1.18.6.1 GO:0005524 ... P09772 10525412
    35649 1qgu:B (1.6) BS03 MG 1.18.6.1 GO:0005524 ... P09772 10525412
    35650 1qgu:C (1.6) BS01 CFM 1.18.6.1 GO:0005524 ... P00466 10525412
    35651 1qgu:C (1.6) BS02 CLF 1.18.6.1 GO:0005524 ... P00466 10525412
    35652 1qgu:D (1.6) BS01 MG 1.18.6.1 GO:0005524 ... P09772 10525412
    35653 1qgu:D (1.6) BS02 CLF 1.18.6.1 GO:0005524 ... P09772 10525412
    35654 1qgu:D (1.6) BS03 MG 1.18.6.1 GO:0005524 ... P09772 10525412
    35655 1qgw:C (1.63) BS01 PEB ? GO:0009507 ... P27198 10430868
    35656 1qgw:C (1.63) BS02 PEB ? GO:0009507 ... P27198 10430868
    35657 1qgw:C (1.63) BS03 PEB ? GO:0009507 ... P27198 10430868
    35658 1qgw:D (1.63) BS01 DBV ? GO:0009507 ... P27198 10430868
    35659 1qgw:D (1.63) BS02 PEB ? GO:0009507 ... P27198 10430868
    35660 1qgw:D (1.63) BS03 PEB ? GO:0009507 ... P27198 10430868
    35661 1qgw:D (1.63) BS04 PEB ? GO:0009507 ... P27198 10430868
    35662 1qgx:A (1.6) BS01 MG 3.1.3.7 GO:0000103 ... P32179 10656801
    35663 1qgx:A (1.6) BS02 PO4 3.1.3.7 GO:0000103 ... P32179 10656801
    35664 1qgx:A (1.6) BS03 AMP 3.1.3.7 GO:0000103 ... P32179 10656801
    35665 1qh1:A (1.6) BS01 CFM 1.18.6.1 GO:0005524 ... P00466 10525412
    35666 1qh1:A (1.6) BS02 CLF 1.18.6.1 GO:0005524 ... P00466 10525412
    35667 1qh1:B (1.6) BS01 CLF 1.18.6.1 GO:0005524 ... P09772 10525412
    35668 1qh1:B (1.6) BS02 MG 1.18.6.1 GO:0005524 ... P09772 10525412
    35669 1qh1:B (1.6) BS03 MG 1.18.6.1 GO:0005524 ... P09772 10525412
    35670 1qh1:C (1.6) BS01 CFM 1.18.6.1 GO:0005524 ... P00466 10525412
    35671 1qh1:C (1.6) BS02 CLF 1.18.6.1 GO:0005524 ... P00466 10525412
    35672 1qh1:D (1.6) BS01 MG 1.18.6.1 GO:0005524 ... P09772 10525412
    35673 1qh1:D (1.6) BS02 CLF 1.18.6.1 GO:0005524 ... P09772 10525412
    35674 1qh1:D (1.6) BS03 MG 1.18.6.1 GO:0005524 ... P09772 10525412
    35675 1qh3:A (1.9) BS01 ZN 3.1.2.6 GO:0004416 ... Q16775 10508780
    35676 1qh3:A (1.9) BS02 ZN 3.1.2.6 GO:0004416 ... Q16775 10508780
    35677 1qh3:A (1.9) BS03 CAC 3.1.2.6 GO:0004416 ... Q16775 10508780
    35678 1qh3:A (1.9) BS04 ACT 3.1.2.6 GO:0004416 ... Q16775 10508780
    35679 1qh3:A (1.9) BS05 MN 3.1.2.6 GO:0004416 ... Q16775 10508780
    35680 1qh3:B (1.9) BS01 ZN 3.1.2.6 GO:0004416 ... Q16775 10508780
    35681 1qh3:B (1.9) BS02 ZN 3.1.2.6 GO:0004416 ... Q16775 10508780
    35682 1qh3:B (1.9) BS03 CAC 3.1.2.6 GO:0004416 ... Q16775 10508780
    35683 1qh3:B (1.9) BS04 ACT 3.1.2.6 GO:0004416 ... Q16775 10508780
    35684 1qh3:B (1.9) BS05 CAC 3.1.2.6 GO:0004416 ... Q16775 10508780
    35685 1qh3:B (1.9) BS06 MN 3.1.2.6 GO:0004416 ... Q16775 10508780
    35686 1qh4:D (1.41) BS01 CA 2.7.3.2 GO:0003824 ... P05122 10595529
    35687 1qh5:A (1.45) BS01 ZN 3.1.2.6 GO:0004416 ... Q16775 10508780
    35688 1qh5:A (1.45) BS02 ZN 3.1.2.6 GO:0004416 ... Q16775 10508780
    35689 1qh5:A (1.45) BS03 GSH 3.1.2.6 GO:0004416 ... Q16775 10508780
    35690 1qh5:B (1.45) BS01 ZN 3.1.2.6 GO:0004416 ... Q16775 10508780
    35691 1qh5:B (1.45) BS02 ZN 3.1.2.6 GO:0004416 ... Q16775 10508780
    35692 1qh5:B (1.45) BS03 GBP 3.1.2.6 GO:0004416 ... Q16775 10508780
    35693 1qh6:A (2.0) BS01 X2F 3.2.1.8 GO:0004553 ... Q7SIE3 10381409
    35694 1qh6:A (2.0) BS02 XYP 3.2.1.8 GO:0004553 ... Q7SIE3 10381409
    35695 1qh6:B (2.0) BS01 X2F 3.2.1.8 GO:0004553 ... Q7SIE3 10381409
    35696 1qh6:B (2.0) BS02 XYP 3.2.1.8 GO:0004553 ... Q7SIE3 10381409
    35697 1qh7:A (1.78) BS01 XYP 3.2.1.8 GO:0004553 ... Q7SIE3 10381409
    35698 1qh7:B (1.78) BS01 XYP 3.2.1.8 GO:0004553 ... Q7SIE3 10381409
    35699 1qh8:A (1.6) BS01 CFM 1.18.6.1 GO:0005524 ... P00466 10525412
    35700 1qh8:A (1.6) BS02 CLF 1.18.6.1 GO:0005524 ... P00466 10525412
    35701 1qh8:B (1.6) BS01 CLF 1.18.6.1 GO:0005524 ... P09772 10525412
    35702 1qh8:B (1.6) BS02 MG 1.18.6.1 GO:0005524 ... P09772 10525412
    35703 1qh8:B (1.6) BS03 MG 1.18.6.1 GO:0005524 ... P09772 10525412
    35704 1qh8:C (1.6) BS01 CFM 1.18.6.1 GO:0005524 ... P00466 10525412
    35705 1qh8:C (1.6) BS02 CLF 1.18.6.1 GO:0005524 ... P00466 10525412
    35706 1qh8:D (1.6) BS01 MG 1.18.6.1 GO:0005524 ... P09772 10525412
    35707 1qh8:D (1.6) BS02 CLF 1.18.6.1 GO:0005524 ... P09772 10525412
    35708 1qh8:D (1.6) BS03 MG 1.18.6.1 GO:0005524 ... P09772 10525412
    35709 1qha:A (2.25) BS01 GLC 2.7.1.1 GO:0001678 ... P19367 10574795
    35710 1qha:A (2.25) BS02 G6P 2.7.1.1 GO:0001678 ... P19367 10574795
    35711 1qha:A (2.25) BS03 GLC 2.7.1.1 GO:0001678 ... P19367 10574795
    35712 1qha:A (2.25) BS04 G6P 2.7.1.1 GO:0001678 ... P19367 10574795
    35713 1qha:A (2.25) BS05 MG 2.7.1.1 GO:0001678 ... P19367 10574795
    35714 1qha:A (2.25) BS06 MG 2.7.1.1 GO:0001678 ... P19367 10574795
    35715 1qha:A (2.25) BS07 ANP 2.7.1.1 GO:0001678 ... P19367 10574795
    35716 1qha:B (2.25) BS01 GLC 2.7.1.1 GO:0001678 ... P19367 10574795
    35717 1qha:B (2.25) BS02 G6P 2.7.1.1 GO:0001678 ... P19367 10574795
    35718 1qha:B (2.25) BS03 GLC 2.7.1.1 GO:0001678 ... P19367 10574795
    35719 1qha:B (2.25) BS04 G6P 2.7.1.1 GO:0001678 ... P19367 10574795
    35720 1qha:B (2.25) BS05 MG 2.7.1.1 GO:0001678 ... P19367 10574795
    35721 1qha:B (2.25) BS06 MG 2.7.1.1 GO:0001678 ... P19367 10574795
    35722 1qha:B (2.25) BS07 ANP 2.7.1.1 GO:0001678 ... P19367 10574795
    35723 1qhb:A (2.3) BS01 CA 1.11.1.18 GO:0004601 ... Q8LLW7 10843856
    35724 1qhb:B (2.3) BS01 CA 1.11.1.18 GO:0004601 ... Q8LLW7 10843856
    35725 1qhb:C (2.3) BS01 CA 1.11.1.18 GO:0004601 ... Q8LLW7 10843856
    35726 1qhb:D (2.3) BS01 CA 1.11.1.18 GO:0004601 ... Q8LLW7 10843856
    35727 1qhb:E (2.3) BS01 CA 1.11.1.18 GO:0004601 ... Q8LLW7 10843856
    35728 1qhb:F (2.3) BS01 CA 1.11.1.18 GO:0004601 ... Q8LLW7 10843856
    35729 1qhc:A (1.7) BS01 PUA 4.6.1.18 GO:0003676 ... P61823 10441122 MOAD: Ki=27nM
    PDBbind: -logKd/Ki=7.57, Ki=27nM
    35730 1qhc:B (1.7) BS01 PUA 4.6.1.18 GO:0003676 ... P61823 10441122 MOAD: Ki=27nM
    35731 1qhd:A (1.95) BS01 CA ? GO:0005198 ... P04509 11285213
    35732 1qhd:A (1.95) BS02 CA ? GO:0005198 ... P04509 11285213
    35733 1qhf:A (1.7) BS01 3PG 5.4.2.11 GO:0003824 ... P00950 10531478
    35734 1qhf:B (1.7) BS01 3PG 5.4.2.11 GO:0003824 ... P00950 10531478
    35735 1qhg:A (2.5) BS01 ATP 5.6.2.4 GO:0000725 ... P56255 10388562
    35736 1qhi:A (1.9) BS01 BPG 2.7.1.21 GO:0004797 ... P0DTH5 9989588
    35737 1qhi:B (1.9) BS01 BPG 2.7.1.21 GO:0004797 ... P0DTH5 9989588
    35738 1qhj:A (1.9) BS01 RET ? GO:0005216 ... P02945 10467143
    35739 1qhj:A (1.9) BS02 PH1 ? GO:0005216 ... P02945 10467143
    35740 1qhj:A (1.9) BS03 PH1 ? GO:0005216 ... P02945 10467143
    35741 1qhj:A (1.9) BS04 PH1 ? GO:0005216 ... P02945 10467143
    35742 1qhj:A (1.9) BS05 PH1 ? GO:0005216 ... P02945 10467143
    35743 1qhj:A (1.9) BS06 PH1 ? GO:0005216 ... P02945 10467143
    35744 1qhj:A (1.9) BS07 PH1 ? GO:0005216 ... P02945 10467143
    35745 1qhn:A (2.7) BS01 SO4 2.7.1.- GO:0005524 ... Q56148 10835366
    35746 1qho:A (1.7) BS01 GLC 3.2.1.133 GO:0003824 ... P19531 10387084
    35747 1qho:A (1.7) BS02 GLC 3.2.1.133 GO:0003824 ... P19531 10387084
    35748 1qho:A (1.7) BS03 GLC 3.2.1.133 GO:0003824 ... P19531 10387084
    35749 1qho:A (1.7) BS04 GLC 3.2.1.133 GO:0003824 ... P19531 10387084
    35750 1qho:A (1.7) BS05 BGC 3.2.1.133 GO:0003824 ... P19531 10387084
    35751 1qho:A (1.7) BS06 GLC 3.2.1.133 GO:0003824 ... P19531 10387084
    35752 1qho:A (1.7) BS07 AGL 3.2.1.133 GO:0003824 ... P19531 10387084
    35753 1qho:A (1.7) BS08 GLC 3.2.1.133 GO:0003824 ... P19531 10387084
    35754 1qho:A (1.7) BS09 GLC 3.2.1.133 GO:0003824 ... P19531 10387084
    35755 1qho:A (1.7) BS10 GLC 3.2.1.133 GO:0003824 ... P19531 10387084
    35756 1qho:A (1.7) BS11 CA 3.2.1.133 GO:0003824 ... P19531 10387084
    35757 1qho:A (1.7) BS12 CA 3.2.1.133 GO:0003824 ... P19531 10387084
    35758 1qho:A (1.7) BS13 CA 3.2.1.133 GO:0003824 ... P19531 10387084
    35759 1qhp:A (1.7) BS01 GLC 3.2.1.133 GO:0003824 ... P19531 10387084
    35760 1qhp:A (1.7) BS02 GLC 3.2.1.133 GO:0003824 ... P19531 10387084
    35761 1qhp:A (1.7) BS03 GLC 3.2.1.133 GO:0003824 ... P19531 10387084
    35762 1qhp:A (1.7) BS04 GLC 3.2.1.133 GO:0003824 ... P19531 10387084
    35763 1qhp:A (1.7) BS05 GLC 3.2.1.133 GO:0003824 ... P19531 10387084
    35764 1qhp:A (1.7) BS06 GLC 3.2.1.133 GO:0003824 ... P19531 10387084
    35765 1qhp:A (1.7) BS07 GLC 3.2.1.133 GO:0003824 ... P19531 10387084
    35766 1qhp:A (1.7) BS08 GLC 3.2.1.133 GO:0003824 ... P19531 10387084
    35767 1qhp:A (1.7) BS09 CA 3.2.1.133 GO:0003824 ... P19531 10387084
    35768 1qhp:A (1.7) BS10 CA 3.2.1.133 GO:0003824 ... P19531 10387084
    35769 1qhp:A (1.7) BS11 CA 3.2.1.133 GO:0003824 ... P19531 10387084
    35770 1qhr:B (2.2) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 10387040
    35771 1qhr:B (2.2) BS02 157 3.4.21.5 GO:0004252 ... P00734 10387040 PDBbind: -logKd/Ki=6.89, IC50=130nM
    BindingDB: IC50=130nM
    35772 1qhs:A (2.8) BS01 SO4 2.7.1.- GO:0005524 ... Q56148 10835366
    35773 1qhs:A (2.8) BS02 CLM 2.7.1.- GO:0005524 ... Q56148 10835366
    35774 1qhs:A (2.8) BS03 CLM 2.7.1.- GO:0005524 ... Q56148 10835366
    35775 1qhu:A (2.3) BS01 HEM ? GO:0006879 ... P20058 10504726
    35776 1qhx:A (2.5) BS01 ATP 2.7.1.- GO:0005524 ... Q56148 10835366
    35777 1qhy:A (2.6) BS01 MG 2.7.1.- GO:0005524 ... Q56148 10835366
    35778 1qhy:A (2.6) BS02 AGS 2.7.1.- GO:0005524 ... Q56148 10835366
    35779 1qhy:A (2.6) BS03 CLM 2.7.1.- GO:0005524 ... Q56148 10835366
    35780 1qhy:A (2.6) BS04 CLM 2.7.1.- GO:0005524 ... Q56148 10835366
    35781 1qhz:A (1.95) BS01 CA 3.2.1.4 GO:0000272 ... O85465 10731432
    35782 1qhz:A (1.95) BS02 CA 3.2.1.4 GO:0000272 ... O85465 10731432
    35783 1qhz:A (1.95) BS03 CA 3.2.1.4 GO:0000272 ... O85465 10731432
    35784 1qi0:A (2.1) BS01 BGC 3.2.1.4 GO:0000272 ... O85465 10731432
    35785 1qi0:A (2.1) BS02 BGC 3.2.1.4 GO:0000272 ... O85465 10731432
    35786 1qi0:A (2.1) BS03 CA 3.2.1.4 GO:0000272 ... O85465 10731432
    35787 1qi0:A (2.1) BS04 CA 3.2.1.4 GO:0000272 ... O85465 10731432
    35788 1qi0:A (2.1) BS05 CA 3.2.1.4 GO:0000272 ... O85465 10731432
    35789 1qi2:A (1.75) BS01 G2F 3.2.1.4 GO:0000272 ... O85465 10731432
    35790 1qi2:A (1.75) BS02 BGC 3.2.1.4 GO:0000272 ... O85465 10731432
    35791 1qi2:A (1.75) BS03 BGC 3.2.1.4 GO:0000272 ... O85465 10731432
    35792 1qi2:A (1.75) BS04 CA 3.2.1.4 GO:0000272 ... O85465 10731432
    35793 1qi2:A (1.75) BS05 CA 3.2.1.4 GO:0000272 ... O85465 10731432
    35794 1qi3:A (2.0) BS01 GLC 3.2.1.60 GO:0005975 ... P13507 10556241
    35795 1qi3:A (2.0) BS02 GLC 3.2.1.60 GO:0005975 ... P13507 10556241
    35796 1qi3:A (2.0) BS03 GLC 3.2.1.60 GO:0005975 ... P13507 10556241
    35797 1qi3:A (2.0) BS04 GLC 3.2.1.60 GO:0005975 ... P13507 10556241
    35798 1qi3:A (2.0) BS05 CA 3.2.1.60 GO:0005975 ... P13507 10556241
    35799 1qi3:A (2.0) BS06 CA 3.2.1.60 GO:0005975 ... P13507 10556241
    35800 1qi4:A (2.0) BS01 GLC 3.2.1.60 GO:0004556 ... P13507 10556241

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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