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BioLiP
Download all results in tab-seperated text for 594392 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    24401 1ofy:A (2.0) BS06 HEC ? GO:0009055 ... Q9RN68 12750363
    24402 1ofy:A (2.0) BS07 HEC ? GO:0009055 ... Q9RN68 12750363
    24403 1ofy:A (2.0) BS08 HEC ? GO:0009055 ... Q9RN68 12750363
    24404 1ofy:A (2.0) BS09 HEC ? GO:0009055 ... Q9RN68 12750363
    24405 1ofy:B (2.0) BS01 HEC ? GO:0009055 ... Q9RN68 12750363
    24406 1ofy:B (2.0) BS02 HEC ? GO:0009055 ... Q9RN68 12750363
    24407 1ofy:B (2.0) BS03 HEC ? GO:0009055 ... Q9RN68 12750363
    24408 1ofy:B (2.0) BS04 HEC ? GO:0009055 ... Q9RN68 12750363
    24409 1ofy:B (2.0) BS05 HEC ? GO:0009055 ... Q9RN68 12750363
    24410 1ofy:B (2.0) BS06 HEC ? GO:0009055 ... Q9RN68 12750363
    24411 1ofy:B (2.0) BS07 HEC ? GO:0009055 ... Q9RN68 12750363
    24412 1ofy:B (2.0) BS08 HEC ? GO:0009055 ... Q9RN68 12750363
    24413 1ofy:B (2.0) BS09 HEC ? GO:0009055 ... Q9RN68 12750363
    24414 1ofy:B (2.0) BS10 HEC ? GO:0009055 ... Q9RN68 12750363
    24415 1og0:A (2.7) BS01 MN 2.5.1.54 GO:0003849 ... P32449 N/A
    24416 1og0:A (2.7) BS02 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    24417 1og0:B (2.7) BS01 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    24418 1og0:B (2.7) BS02 MN 2.5.1.54 GO:0003849 ... P32449 N/A
    24419 1og0:C (2.7) BS01 MN 2.5.1.54 GO:0003849 ... P32449 N/A
    24420 1og0:C (2.7) BS02 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    24421 1og0:C (2.7) BS03 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    24422 1og0:D (2.7) BS01 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    24423 1og0:D (2.7) BS02 MN 2.5.1.54 GO:0003849 ... P32449 N/A
    24424 1og0:D (2.7) BS03 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    24425 1og0:E (2.7) BS01 MN 2.5.1.54 GO:0003849 ... P32449 N/A
    24426 1og0:E (2.7) BS02 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    24427 1og0:E (2.7) BS03 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    24428 1og0:F (2.7) BS01 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    24429 1og0:F (2.7) BS02 MN 2.5.1.54 GO:0003849 ... P32449 N/A
    24430 1og0:F (2.7) BS03 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    24431 1og0:G (2.7) BS01 MN 2.5.1.54 GO:0003849 ... P32449 N/A
    24432 1og0:G (2.7) BS02 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    24433 1og0:G (2.7) BS03 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    24434 1og0:H (2.7) BS01 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    24435 1og0:H (2.7) BS02 MN 2.5.1.54 GO:0003849 ... P32449 N/A
    24436 1og0:H (2.7) BS03 PHE 2.5.1.54 GO:0003849 ... P32449 N/A
    24437 1og2:A (2.6) BS01 HEC 1.14.14.1
    1.14.14.51
    1.14.14.52
    1.14.14.53
    GO:0004497 ... P11712 12861225
    24438 1og2:B (2.6) BS01 HEC 1.14.14.1
    1.14.14.51
    1.14.14.52
    1.14.14.53
    GO:0004497 ... P11712 12861225
    24439 1og5:A (2.55) BS01 HEC 1.14.14.1
    1.14.14.51
    1.14.14.52
    1.14.14.53
    GO:0004497 ... P11712 12861225
    24440 1og5:A (2.55) BS02 SWF 1.14.14.1
    1.14.14.51
    1.14.14.52
    1.14.14.53
    GO:0004497 ... P11712 12861225
    24441 1og5:B (2.55) BS01 HEC 1.14.14.1
    1.14.14.51
    1.14.14.52
    1.14.14.53
    GO:0004497 ... P11712 12861225
    24442 1og5:B (2.55) BS02 SWF 1.14.14.1
    1.14.14.51
    1.14.14.52
    1.14.14.53
    GO:0004497 ... P11712 12861225
    24443 1og6:A (2.8) BS01 NAP 1.-.-.- GO:0005829 ... P76187 N/A
    24444 1og6:B (2.8) BS01 NAP 1.-.-.- GO:0005829 ... P76187 N/A
    24445 1og6:C (2.8) BS01 NAP 1.-.-.- GO:0005829 ... P76187 N/A
    24446 1ogd:A (1.95) BS01 RIP 5.4.99.62 GO:0005737 ... P36946 12738765 MOAD: Kd=0.93mM
    24447 1ogd:B (1.95) BS01 RIP 5.4.99.62 GO:0005737 ... P36946 12738765 MOAD: Kd=0.93mM
    24448 1ogd:C (1.95) BS01 RIP 5.4.99.62 GO:0005737 ... P36946 12738765 MOAD: Kd=0.93mM
    24449 1ogd:D (1.95) BS01 RIP 5.4.99.62 GO:0005737 ... P36946 12738765 MOAD: Kd=0.93mM
    24450 1ogd:E (1.95) BS01 RIP 5.4.99.62 GO:0005737 ... P36946 12738765 MOAD: Kd=0.93mM
    24451 1oge:A (2.05) BS01 RP5 5.4.99.62 GO:0005737 ... P36946 12738765
    24452 1oge:B (2.05) BS01 RP5 5.4.99.62 GO:0005737 ... P36946 12738765
    24453 1oge:C (2.05) BS01 RP5 5.4.99.62 GO:0005737 ... P36946 12738765
    24454 1oge:D (2.05) BS01 RP5 5.4.99.62 GO:0005737 ... P36946 12738765
    24455 1oge:E (2.05) BS01 RP5 5.4.99.62 GO:0005737 ... P36946 12738765
    24456 1ogg:A (1.97) BS01 AMI 3.2.1.14 GO:0004553 ... P11797 14726210 PDBbind: -logKd/Ki=5.19, Ki=6.4uM
    24457 1ogg:B (1.97) BS01 AMI 3.2.1.14 GO:0004553 ... P11797 14726210
    24458 1ogo:X (1.65) BS01 BGC 3.2.1.11 GO:0004553 ... P48845 12962629
    24459 1ogo:X (1.65) BS02 GLC 3.2.1.11 GO:0004553 ... P48845 12962629
    24460 1ogp:A (2.6) BS01 MTQ 1.8.3.1 GO:0005739 ... Q9S850 14527393
    24461 1ogp:B (2.6) BS01 MTQ 1.8.3.1 GO:0005739 ... Q9S850 14527393
    24462 1ogp:C (2.6) BS01 MTQ 1.8.3.1 GO:0005739 ... Q9S850 14527393
    24463 1ogp:D (2.6) BS01 MTQ 1.8.3.1 GO:0005739 ... Q9S850 14527393
    24464 1ogp:E (2.6) BS01 MTQ 1.8.3.1 GO:0005739 ... Q9S850 14527393
    24465 1ogp:F (2.6) BS01 MTQ 1.8.3.1 GO:0005739 ... Q9S850 14527393
    24466 1ogu:A (2.6) BS01 ST8 2.7.11.22 GO:0000082 ... P24941 12941338 PDBbind: -logKd/Ki=7.47, IC50=0.034uM
    BindingDB: Ki=2400nM, IC50=34nM
    24467 1ogu:C (2.6) BS01 ST8 2.7.11.22 GO:0000082 ... P24941 12941338 BindingDB: Ki=2400nM, IC50=34nM
    24468 1ogv:H (2.35) BS01 CDL ? GO:0015979 ... P0C0Y7 12899837
    24469 1ogv:L (2.35) BS01 BCL ? GO:0009772 ... P0C0Y8 12899837
    24470 1ogv:L (2.35) BS02 BCL ? GO:0009772 ... P0C0Y8 12899837
    24471 1ogv:L (2.35) BS03 BPH ? GO:0009772 ... P0C0Y8 12899837
    24472 1ogv:L (2.35) BS04 BCL ? GO:0009772 ... P0C0Y8 12899837
    24473 1ogv:L (2.35) BS05 BPH ? GO:0009772 ... P0C0Y8 12899837
    24474 1ogv:L (2.35) BS06 U10 ? GO:0009772 ... P0C0Y8 12899837
    24475 1ogv:L (2.35) BS07 FE2 ? GO:0009772 ... P0C0Y8 12899837
    24476 1ogv:M (2.35) BS01 BCL ? GO:0009772 ... P0C0Y9 12899837
    24477 1ogv:M (2.35) BS02 BPH ? GO:0009772 ... P0C0Y9 12899837
    24478 1ogv:M (2.35) BS03 BCL ? GO:0009772 ... P0C0Y9 12899837
    24479 1ogv:M (2.35) BS04 BCL ? GO:0009772 ... P0C0Y9 12899837
    24480 1ogv:M (2.35) BS05 BPH ? GO:0009772 ... P0C0Y9 12899837
    24481 1ogv:M (2.35) BS06 U10 ? GO:0009772 ... P0C0Y9 12899837
    24482 1ogv:M (2.35) BS07 CDL ? GO:0009772 ... P0C0Y9 12899837
    24483 1ogv:M (2.35) BS08 FE2 ? GO:0009772 ... P0C0Y9 12899837
    24484 1ogv:M (2.35) BS09 CL ? GO:0009772 ... P0C0Y9 12899837
    24485 1ogy:A (3.2) BS01 SF4 1.9.6.1 GO:0005506 ... Q53176 14528294
    24486 1ogy:A (3.2) BS02 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    24487 1ogy:A (3.2) BS03 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    24488 1ogy:A (3.2) BS04 HEC 1.9.6.1 GO:0005506 ... Q53176 14528294
    24489 1ogy:B (3.2) BS01 HEC ? GO:0009061 ... Q53177 14528294
    24490 1ogy:B (3.2) BS02 HEC ? GO:0009061 ... Q53177 14528294
    24491 1ogy:C (3.2) BS01 SF4 1.9.6.1 GO:0005506 ... Q53176 14528294
    24492 1ogy:C (3.2) BS02 MO 1.9.6.1 GO:0005506 ... Q53176 14528294
    24493 1ogy:C (3.2) BS03 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    24494 1ogy:C (3.2) BS04 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    24495 1ogy:C (3.2) BS05 HEC 1.9.6.1 GO:0005506 ... Q53176 14528294
    24496 1ogy:D (3.2) BS01 HEC ? GO:0009061 ... Q53177 14528294
    24497 1ogy:D (3.2) BS02 HEC ? GO:0009061 ... Q53177 14528294
    24498 1ogy:D (3.2) BS03 HEC ? GO:0009061 ... Q53177 14528294
    24499 1ogy:E (3.2) BS01 SF4 1.9.6.1 GO:0005506 ... Q53176 14528294
    24500 1ogy:E (3.2) BS02 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    24501 1ogy:E (3.2) BS03 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    24502 1ogy:F (3.2) BS01 HEC ? GO:0009061 ... Q53177 14528294
    24503 1ogy:F (3.2) BS02 HEC ? GO:0009061 ... Q53177 14528294
    24504 1ogy:G (3.2) BS01 SF4 1.9.6.1 GO:0005506 ... Q53176 14528294
    24505 1ogy:G (3.2) BS02 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    24506 1ogy:G (3.2) BS03 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    24507 1ogy:H (3.2) BS01 HEC ? GO:0009061 ... Q53177 14528294
    24508 1ogy:H (3.2) BS02 HEC ? GO:0009061 ... Q53177 14528294
    24509 1ogy:I (3.2) BS01 SF4 1.9.6.1 GO:0005506 ... Q53176 14528294
    24510 1ogy:I (3.2) BS02 MO 1.9.6.1 GO:0005506 ... Q53176 14528294
    24511 1ogy:I (3.2) BS03 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    24512 1ogy:I (3.2) BS04 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    24513 1ogy:I (3.2) BS05 HEC 1.9.6.1 GO:0005506 ... Q53176 14528294
    24514 1ogy:J (3.2) BS01 HEC ? GO:0009061 ... Q53177 14528294
    24515 1ogy:J (3.2) BS02 HEC ? GO:0009061 ... Q53177 14528294
    24516 1ogy:K (3.2) BS01 SF4 1.9.6.1 GO:0005506 ... Q53176 14528294
    24517 1ogy:K (3.2) BS02 MO 1.9.6.1 GO:0005506 ... Q53176 14528294
    24518 1ogy:K (3.2) BS03 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    24519 1ogy:K (3.2) BS04 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    24520 1ogy:K (3.2) BS05 HEC 1.9.6.1 GO:0005506 ... Q53176 14528294
    24521 1ogy:L (3.2) BS01 HEC ? GO:0009061 ... Q53177 14528294
    24522 1ogy:L (3.2) BS02 HEC ? GO:0009061 ... Q53177 14528294
    24523 1ogy:M (3.2) BS01 SF4 1.9.6.1 GO:0005506 ... Q53176 14528294
    24524 1ogy:M (3.2) BS02 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    24525 1ogy:M (3.2) BS03 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    24526 1ogy:M (3.2) BS04 HEC 1.9.6.1 GO:0005506 ... Q53176 14528294
    24527 1ogy:N (3.2) BS01 HEC ? GO:0009061 ... Q53177 14528294
    24528 1ogy:N (3.2) BS02 HEC ? GO:0009061 ... Q53177 14528294
    24529 1ogy:O (3.2) BS01 SF4 1.9.6.1 GO:0005506 ... Q53176 14528294
    24530 1ogy:O (3.2) BS02 MO 1.9.6.1 GO:0005506 ... Q53176 14528294
    24531 1ogy:O (3.2) BS03 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    24532 1ogy:O (3.2) BS04 MGD 1.9.6.1 GO:0005506 ... Q53176 14528294
    24533 1ogy:O (3.2) BS05 HEC 1.9.6.1 GO:0005506 ... Q53176 14528294
    24534 1ogy:P (3.2) BS01 HEC ? GO:0009061 ... Q53177 14528294
    24535 1ogy:P (3.2) BS02 HEC ? GO:0009061 ... Q53177 14528294
    24536 1oh2:P (2.4) BS01 GLC ? GO:0015288 ... P22340 N/A
    24537 1oh2:P (2.4) BS02 FRU ? GO:0015288 ... P22340 N/A
    24538 1oh2:P (2.4) BS03 GLC ? GO:0015288 ... P22340 N/A
    24539 1oh2:P (2.4) BS04 CA ? GO:0015288 ... P22340 N/A
    24540 1oh2:Q (2.4) BS01 GLC ? GO:0015288 ... P22340 N/A
    24541 1oh2:Q (2.4) BS02 FRU ? GO:0015288 ... P22340 N/A
    24542 1oh2:Q (2.4) BS03 GLC ? GO:0015288 ... P22340 N/A
    24543 1oh2:Q (2.4) BS04 CA ? GO:0015288 ... P22340 N/A
    24544 1oh2:R (2.4) BS01 GLC ? GO:0015288 ... P22340 N/A
    24545 1oh2:R (2.4) BS02 FRU ? GO:0015288 ... P22340 N/A
    24546 1oh2:R (2.4) BS03 GLC ? GO:0015288 ... P22340 N/A
    24547 1oh2:R (2.4) BS04 CA ? GO:0015288 ... P22340 N/A
    24548 1oh5:A (2.9) BS01 dna ? GO:0000018 ... P23909 12907723
    24549 1oh5:A (2.9) BS02 dna ? GO:0000018 ... P23909 12907723
    24550 1oh5:A (2.9) BS03 ADP ? GO:0000018 ... P23909 12907723
    24551 1oh5:B (2.9) BS01 dna ? GO:0000018 ... P23909 12907723
    24552 1oh6:A (2.4) BS01 dna ? GO:0000018 ... P23909 12907723
    24553 1oh6:A (2.4) BS02 dna ? GO:0000018 ... P23909 12907723
    24554 1oh6:A (2.4) BS03 ADP ? GO:0000018 ... P23909 12907723
    24555 1oh6:B (2.4) BS01 dna ? GO:0000018 ... P23909 12907723
    24556 1oh6:B (2.4) BS02 dna ? GO:0000018 ... P23909 12907723
    24557 1oh7:A (2.5) BS01 dna ? GO:0000018 ... P23909 12907723
    24558 1oh7:A (2.5) BS02 dna ? GO:0000018 ... P23909 12907723
    24559 1oh7:A (2.5) BS03 ADP ? GO:0000018 ... P23909 12907723
    24560 1oh7:B (2.5) BS01 dna ? GO:0000018 ... P23909 12907723
    24561 1oh7:B (2.5) BS02 dna ? GO:0000018 ... P23909 12907723
    24562 1oh8:A (2.9) BS01 dna ? GO:0000018 ... P23909 12907723
    24563 1oh8:A (2.9) BS02 dna ? GO:0000018 ... P23909 12907723
    24564 1oh8:A (2.9) BS03 ADP ? GO:0000018 ... P23909 12907723
    24565 1oh8:B (2.9) BS01 dna ? GO:0000018 ... P23909 12907723
    24566 1oh9:A (1.91) BS01 ADP 2.7.2.8 GO:0003991 ... P0A6C8 12875848
    24567 1oh9:A (1.91) BS02 NLG 2.7.2.8 GO:0003991 ... P0A6C8 12875848
    24568 1oh9:A (1.91) BS03 ALF 2.7.2.8 GO:0003991 ... P0A6C8 12875848
    24569 1oha:A (1.9) BS01 ADP 2.7.2.8 GO:0003991 ... P0A6C8 12875848
    24570 1oha:A (1.9) BS02 NLG 2.7.2.8 GO:0003991 ... P0A6C8 12875848
    24571 1ohb:A (1.9) BS01 ADP 2.7.2.8 GO:0003991 ... P0A6C8 12875848
    24572 1ohh:A (2.8) BS01 ANP ? GO:0005515 ... P19483 12923572
    24573 1ohh:B (2.8) BS01 ANP ? GO:0005515 ... P19483 12923572
    24574 1ohh:B (2.8) BS02 ANP ? GO:0005515 ... P19483 12923572
    24575 1ohh:C (2.8) BS01 ANP ? GO:0005515 ... P19483 12923572
    24576 1ohh:D (2.8) BS01 ANP 7.1.2.2 GO:0005515 ... P00829 12923572
    24577 1ohh:F (2.8) BS01 ANP 7.1.2.2 GO:0005515 ... P00829 12923572
    24578 1ohh:F (2.8) BS02 MG 7.1.2.2 GO:0005515 ... P00829 12923572
    24579 1ohj:A (2.5) BS01 NDP 1.5.1.3 GO:0000900 ... P00374 9374868
    24580 1ohj:A (2.5) BS02 COP 1.5.1.3 GO:0000900 ... P00374 9374868 BindingDB: IC50=12nM, Ki=0.350000nM
    24581 1ohk:A (2.5) BS01 NDP 1.5.1.3 GO:0000900 ... P00374 9374868
    24582 1ohk:A (2.5) BS02 COP 1.5.1.3 GO:0000900 ... P00374 9374868 BindingDB: IC50=12nM, Ki=0.350000nM
    24583 1ohl:A (1.6) BS01 ZN 4.2.1.24 GO:0004655 ... P05373 12777167
    24584 1ohl:A (1.6) BS02 PBG 4.2.1.24 GO:0004655 ... P05373 12777167
    24585 1oht:A (2.0) BS01 ZN 3.5.1.28 GO:0002814 ... Q8INK6 12845326
    24586 1ohv:A (2.3) BS01 PLP 2.6.1.19
    2.6.1.22
    GO:0003867 ... P80147 14534310
    24587 1ohv:A (2.3) BS02 FES 2.6.1.19
    2.6.1.22
    GO:0003867 ... P80147 14534310
    24588 1ohv:B (2.3) BS01 FES 2.6.1.19
    2.6.1.22
    GO:0003867 ... P80147 14534310
    24589 1ohv:B (2.3) BS02 PLP 2.6.1.19
    2.6.1.22
    GO:0003867 ... P80147 14534310
    24590 1ohv:C (2.3) BS01 PLP 2.6.1.19
    2.6.1.22
    GO:0003867 ... P80147 14534310
    24591 1ohv:C (2.3) BS02 FES 2.6.1.19
    2.6.1.22
    GO:0003867 ... P80147 14534310
    24592 1ohv:D (2.3) BS01 FES 2.6.1.19
    2.6.1.22
    GO:0003867 ... P80147 14534310
    24593 1ohv:D (2.3) BS02 PLP 2.6.1.19
    2.6.1.22
    GO:0003867 ... P80147 14534310
    24594 1ohw:A (2.3) BS01 PLP 2.6.1.19
    2.6.1.22
    GO:0003867 ... P80147 14534310
    24595 1ohw:A (2.3) BS02 VIG 2.6.1.19
    2.6.1.22
    GO:0003867 ... P80147 14534310
    24596 1ohw:A (2.3) BS03 FES 2.6.1.19
    2.6.1.22
    GO:0003867 ... P80147 14534310
    24597 1ohw:A (2.3) BS04 VIG 2.6.1.19
    2.6.1.22
    GO:0003867 ... P80147 14534310
    24598 1ohw:B (2.3) BS01 VIG 2.6.1.19
    2.6.1.22
    GO:0003867 ... P80147 14534310
    24599 1ohw:B (2.3) BS02 FES 2.6.1.19
    2.6.1.22
    GO:0003867 ... P80147 14534310
    24600 1ohw:B (2.3) BS03 PLP 2.6.1.19
    2.6.1.22
    GO:0003867 ... P80147 14534310

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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