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BioLiP
Download all results in tab-seperated text for 817662 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    817001 9evx:I (1.71) BS01 CLA ? GO:0005737 ... Q8DJZ6 38900892
    817002 9evx:K (1.71) BS01 peptide ? GO:0005737 ... Q9F1K9 38900892
    817003 9evx:K (1.71) BS02 CLA ? GO:0005737 ... Q9F1K9 38900892
    817004 9evx:K (1.71) BS03 CLA ? GO:0005737 ... Q9F1K9 38900892
    817005 9evx:Z (1.71) BS01 peptide ? GO:0009523 ... Q8DHJ2 38900892
    817006 9evx:a (1.71) BS01 FE2 1.10.3.9 GO:0005506 ... P0A444 38900892
    817007 9evx:a (1.71) BS02 CLA 1.10.3.9 GO:0005506 ... P0A444 38900892
    817008 9evx:a (1.71) BS03 CLA 1.10.3.9 GO:0005506 ... P0A444 38900892
    817009 9evx:a (1.71) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 38900892
    817010 9evx:a (1.71) BS05 OEX 1.10.3.9 GO:0005506 ... P0A444 38900892
    817011 9evx:a (1.71) BS06 PHO 1.10.3.9 GO:0005506 ... P0A444 38900892
    817012 9evx:a (1.71) BS07 CLA 1.10.3.9 GO:0005506 ... P0A444 38900892
    817013 9evx:a (1.71) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 38900892
    817014 9evx:a (1.71) BS09 PHO 1.10.3.9 GO:0005506 ... P0A444 38900892
    817015 9evx:a (1.71) BS10 BCT 1.10.3.9 GO:0005506 ... P0A444 38900892
    817016 9evx:b (1.71) BS01 CLA ? GO:0009523 ... Q8DIQ1 38900892
    817017 9evx:b (1.71) BS02 CLA ? GO:0009523 ... Q8DIQ1 38900892
    817018 9evx:b (1.71) BS03 CLA ? GO:0009523 ... Q8DIQ1 38900892
    817019 9evx:b (1.71) BS04 CLA ? GO:0009523 ... Q8DIQ1 38900892
    817020 9evx:b (1.71) BS05 CLA ? GO:0009523 ... Q8DIQ1 38900892
    817021 9evx:b (1.71) BS06 CLA ? GO:0009523 ... Q8DIQ1 38900892
    817022 9evx:b (1.71) BS07 CLA ? GO:0009523 ... Q8DIQ1 38900892
    817023 9evx:b (1.71) BS08 CLA ? GO:0009523 ... Q8DIQ1 38900892
    817024 9evx:b (1.71) BS09 CLA ? GO:0009523 ... Q8DIQ1 38900892
    817025 9evx:b (1.71) BS10 CLA ? GO:0009523 ... Q8DIQ1 38900892
    817026 9evx:b (1.71) BS11 CLA ? GO:0009523 ... Q8DIQ1 38900892
    817027 9evx:b (1.71) BS12 CLA ? GO:0009523 ... Q8DIQ1 38900892
    817028 9evx:b (1.71) BS13 CLA ? GO:0009523 ... Q8DIQ1 38900892
    817029 9evx:b (1.71) BS14 CLA ? GO:0009523 ... Q8DIQ1 38900892
    817030 9evx:b (1.71) BS15 CLA ? GO:0009523 ... Q8DIQ1 38900892
    817031 9evx:b (1.71) BS16 CLA ? GO:0009523 ... Q8DIQ1 38900892
    817032 9evx:c (1.71) BS01 OEX ? GO:0005737 ... Q8DIF8 38900892
    817033 9evx:c (1.71) BS02 CLA ? GO:0005737 ... Q8DIF8 38900892
    817034 9evx:c (1.71) BS03 CLA ? GO:0005737 ... Q8DIF8 38900892
    817035 9evx:c (1.71) BS04 CLA ? GO:0005737 ... Q8DIF8 38900892
    817036 9evx:c (1.71) BS05 CLA ? GO:0005737 ... Q8DIF8 38900892
    817037 9evx:c (1.71) BS06 CLA ? GO:0005737 ... Q8DIF8 38900892
    817038 9evx:c (1.71) BS07 CLA ? GO:0005737 ... Q8DIF8 38900892
    817039 9evx:c (1.71) BS08 CLA ? GO:0005737 ... Q8DIF8 38900892
    817040 9evx:c (1.71) BS09 CLA ? GO:0005737 ... Q8DIF8 38900892
    817041 9evx:c (1.71) BS10 CLA ? GO:0005737 ... Q8DIF8 38900892
    817042 9evx:c (1.71) BS11 CLA ? GO:0005737 ... Q8DIF8 38900892
    817043 9evx:c (1.71) BS12 CLA ? GO:0005737 ... Q8DIF8 38900892
    817044 9evx:c (1.71) BS13 CLA ? GO:0005737 ... Q8DIF8 38900892
    817045 9evx:c (1.71) BS14 CLA ? GO:0005737 ... Q8DIF8 38900892
    817046 9evx:d (1.71) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    817047 9evx:d (1.71) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    817048 9evx:d (1.71) BS03 PHO 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    817049 9evx:d (1.71) BS04 CLA 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    817050 9evx:d (1.71) BS05 CLA 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    817051 9evx:d (1.71) BS06 PHO 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    817052 9evx:d (1.71) BS07 BCT 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    817053 9evx:d (1.71) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    817054 9evx:d (1.71) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    817055 9evx:e (1.71) BS01 HEM ? GO:0005506 ... Q8DIP0 38900892
    817056 9evx:f (1.71) BS01 HEM ? GO:0005506 ... Q8DIN9 38900892
    817057 9evx:h (1.71) BS01 CLA ? GO:0009523 ... Q8DJ43 38900892
    817058 9evx:h (1.71) BS02 CLA ? GO:0009523 ... Q8DJ43 38900892
    817059 9evx:h (1.71) BS03 CLA ? GO:0009523 ... Q8DJ43 38900892
    817060 9evx:h (1.71) BS04 CLA ? GO:0009523 ... Q8DJ43 38900892
    817061 9evx:i (1.71) BS01 CLA ? GO:0005737 ... Q8DJZ6 38900892
    817062 9evx:j (1.71) BS01 peptide ? GO:0009523 ... P59087 38900892
    817063 9evx:k (1.71) BS01 peptide ? GO:0005737 ... Q9F1K9 38900892
    817064 9evx:k (1.71) BS02 CLA ? GO:0005737 ... Q9F1K9 38900892
    817065 9evx:k (1.71) BS03 CLA ? GO:0005737 ... Q9F1K9 38900892
    817066 9evx:z (1.71) BS01 peptide ? GO:0009523 ... Q8DHJ2 38900892
    817067 9ex0:A (1.45) BS01 NA N/A GO:0003796 ... P00698 38842919
    817068 9ex0:A (1.45) BS02 A1ICR N/A GO:0003796 ... P00698 38842919
    817069 9ex0:A (1.45) BS03 VO4 N/A GO:0003796 ... P00698 38842919
    817070 9ex1:A (1.785) BS01 A1H8D N/A GO:0003796 ... P00698 38842919
    817071 9ex2:A (1.172) BS01 NA N/A GO:0003796 ... P00698 38842919
    817072 9ex2:A (1.172) BS02 VO4 N/A GO:0003796 ... P00698 38842919
    817073 9ex2:A (1.172) BS03 A1H8D N/A GO:0003796 ... P00698 38842919
    817074 9ex2:A (1.172) BS04 A1H8D N/A GO:0003796 ... P00698 38842919
    817075 9ex2:A (1.172) BS05 VO4 N/A GO:0003796 ... P00698 38842919
    817076 9ex2:A (1.172) BS06 VO4 N/A GO:0003796 ... P00698 38842919
    817077 9ey8:AA (2.2) BS01 FUC 1.14.18.- GO:0016491 ... P17643 38642076
    817078 9ey8:AA (2.2) BS02 ZN 1.14.18.- GO:0016491 ... P17643 38642076
    817079 9ey8:AA (2.2) BS03 ZN 1.14.18.- GO:0016491 ... P17643 38642076
    817080 9ey8:BA (2.2) BS01 ZN 1.14.18.- GO:0016491 ... P17643 38642076
    817081 9ey8:BA (2.2) BS02 ZN 1.14.18.- GO:0016491 ... P17643 38642076
    817082 9ey8:CA (2.2) BS01 TY2 1.14.18.- GO:0016491 ... P17643 38642076
    817083 9ey8:CA (2.2) BS02 ZN 1.14.18.- GO:0016491 ... P17643 38642076
    817084 9ey8:CA (2.2) BS03 ZN 1.14.18.- GO:0016491 ... P17643 38642076
    817085 9ey8:DA (2.2) BS01 ZN 1.14.18.- GO:0016491 ... P17643 38642076
    817086 9ey8:DA (2.2) BS02 ZN 1.14.18.- GO:0016491 ... P17643 38642076
    817087 9ezj:A (2.612) BS01 ZIQ 1.13.11.11 GO:0004833 ... P48775 N/A
    817088 9ezj:A (2.612) BS02 A1H8G 1.13.11.11 GO:0004833 ... P48775 N/A
    817089 9ezj:B (2.612) BS01 ZIQ 1.13.11.11 GO:0004833 ... P48775 N/A
    817090 9ezj:B (2.612) BS02 A1H8G 1.13.11.11 GO:0004833 ... P48775 N/A
    817091 9ezj:C (2.612) BS01 ZIQ 1.13.11.11 GO:0004833 ... P48775 N/A
    817092 9ezj:C (2.612) BS02 A1H8G 1.13.11.11 GO:0004833 ... P48775 N/A
    817093 9ezj:D (2.612) BS01 ZIQ 1.13.11.11 GO:0004833 ... P48775 N/A
    817094 9ezj:D (2.612) BS02 A1H8G 1.13.11.11 GO:0004833 ... P48775 N/A
    817095 9f0f:A (2.1) BS01 HT9 4.99.1.9 GO:0004325 ... Q8Y565 N/A
    817096 9f0f:A (2.1) BS02 FE 4.99.1.9 GO:0004325 ... Q8Y565 N/A
    817097 9f0g:A (1.85) BS01 FEC 4.99.1.9 GO:0004325 ... Q8Y565 N/A
    817098 9f14:A (2.3) BS01 SAC N/A GO:0000976 ... P45600 38976018
    817099 9f14:B (2.3) BS01 SAC N/A GO:0000976 ... P45600 38976018
    817100 9f3w:A (2.7) BS01 A1H9I 4.3.99.4 GO:0003824 ... A0A486V7R5 N/A
    817101 9f3w:B (2.7) BS01 A1H9I 4.3.99.4 GO:0003824 ... A0A486V7R5 N/A
    817102 9f3w:C (2.7) BS01 A1H9I 4.3.99.4 GO:0003824 ... A0A486V7R5 N/A
    817103 9f3w:D (2.7) BS01 A1H9I 4.3.99.4 GO:0003824 ... A0A486V7R5 N/A
    817104 9f3w:E (2.7) BS01 A1H9I 4.3.99.4 GO:0003824 ... A0A486V7R5 N/A
    817105 9f3w:F (2.7) BS01 A1H9I 4.3.99.4 GO:0003824 ... A0A486V7R5 N/A
    817106 9f3w:G (2.7) BS01 A1H9I 4.3.99.4 GO:0003824 ... A0A486V7R5 N/A
    817107 9f3w:H (2.7) BS01 A1H9I 4.3.99.4 GO:0003824 ... A0A486V7R5 N/A
    817108 9f3x:A (2.7) BS01 A1H9K 4.3.99.4 GO:0003824 ... A0A486V7R5 N/A
    817109 9f3x:B (2.7) BS01 A1H9K 4.3.99.4 GO:0003824 ... A0A486V7R5 N/A
    817110 9f3x:C (2.7) BS01 A1H9K 4.3.99.4 GO:0003824 ... A0A486V7R5 N/A
    817111 9f3x:D (2.7) BS01 A1H9K 4.3.99.4 GO:0003824 ... A0A486V7R5 N/A
    817112 9f3x:E (2.7) BS01 A1H9K 4.3.99.4 GO:0003824 ... A0A486V7R5 N/A
    817113 9f3x:F (2.7) BS01 A1H9K 4.3.99.4 GO:0003824 ... A0A486V7R5 N/A
    817114 9f3x:G (2.7) BS01 A1H9K 4.3.99.4 GO:0003824 ... A0A486V7R5 N/A
    817115 9f3x:H (2.7) BS01 A1H9K 4.3.99.4 GO:0003824 ... A0A486V7R5 N/A
    817116 9f3y:A (2.9) BS01 A1H9L 4.3.99.4 GO:0003824 ... A0A486V7R5 N/A
    817117 9f3y:B (2.9) BS01 A1H9L 4.3.99.4 GO:0003824 ... A0A486V7R5 N/A
    817118 9f3y:C (2.9) BS01 A1H9L 4.3.99.4 GO:0003824 ... A0A486V7R5 N/A
    817119 9f3y:D (2.9) BS01 A1H9L 4.3.99.4 GO:0003824 ... A0A486V7R5 N/A
    817120 9f3y:E (2.9) BS01 A1H9L 4.3.99.4 GO:0003824 ... A0A486V7R5 N/A
    817121 9f3y:F (2.9) BS01 A1H9L 4.3.99.4 GO:0003824 ... A0A486V7R5 N/A
    817122 9f3y:G (2.9) BS01 A1H9L 4.3.99.4 GO:0003824 ... A0A486V7R5 N/A
    817123 9f3y:H (2.9) BS01 A1H9L 4.3.99.4 GO:0003824 ... A0A486V7R5 N/A
    817124 9f4d:A (1.5) BS01 JH1 ? GO:0003676 ... P09651 N/A
    817125 9f4e:A (1.57) BS01 VZM ? GO:0003676 ... P09651 N/A
    817126 9f4f:A (1.4) BS01 A1H9T ? GO:0003676 ... P09651 N/A
    817127 9f4g:A (1.4) BS01 SZE ? GO:0003676 ... P09651 N/A
    817128 9f4h:A (1.4) BS01 NUY ? GO:0003676 ... P09651 N/A
    817129 9f4h:A (1.4) BS02 NUY ? GO:0003676 ... P09651 N/A
    817130 9f4j:A (1.4) BS01 NWP ? GO:0003676 ... P09651 N/A
    817131 9f4k:A (1.8) BS01 A1H9R ? GO:0003676 ... P09651 N/A
    817132 9f4l:A (1.4) BS01 WGP ? GO:0003676 ... P09651 N/A
    817133 9f4m:A (1.39) BS01 A1H97 ? GO:0003676 ... P09651 N/A
    817134 9f4n:A (1.4) BS01 O3J ? GO:0003676 ... P09651 N/A
    817135 9f4o:A (1.4) BS01 A1H95 ? GO:0003676 ... P09651 N/A
    817136 9f4p:A (1.4) BS01 Q49 ? GO:0003676 ... P09651 N/A
    817137 9f4q:A (1.4) BS01 A1H9S ? GO:0003676 ... P09651 N/A
    817138 9f4r:A (1.59) BS01 K3J ? GO:0003676 ... P09651 N/A
    817139 9f4s:A (1.4) BS01 JGA ? GO:0003676 ... P09651 N/A
    817140 9f4t:A (1.42) BS01 WZY ? GO:0003676 ... P09651 N/A
    817141 9f4u:A (1.4) BS01 LXA ? GO:0003676 ... P09651 N/A
    817142 9f4v:A (1.4) BS01 UQJ ? GO:0003676 ... P09651 N/A
    817143 9f4w:A (1.6) BS01 O0M ? GO:0003676 ... P09651 N/A
    817144 9f4x:A (1.6) BS01 HWH ? GO:0003676 ... P09651 N/A
    817145 9f4y:A (1.4) BS01 W0S ? GO:0003676 ... P09651 N/A
    817146 9f4z:A (1.6) BS01 9KS ? GO:0003676 ... P09651 N/A
    817147 9f50:A (1.5) BS01 K2G ? GO:0003676 ... P09651 N/A
    817148 9f51:A (1.5) BS01 A1H9V ? GO:0003676 ... P09651 N/A
    817149 9f52:A (1.5) BS01 A1H9W ? GO:0003676 ... P09651 N/A
    817150 9f53:A (1.8) BS01 K3A ? GO:0003676 ... P09651 N/A
    817151 9f54:A (1.7) BS01 K3Y ? GO:0003676 ... P09651 N/A
    817152 9f55:A (1.55) BS01 A1H9U ? GO:0003676 ... P09651 N/A
    817153 9f55:A (1.55) BS02 A1H9U ? GO:0003676 ... P09651 N/A
    817154 9f5c:A (1.45) BS01 LJA ? GO:0003676 ... P09651 N/A
    817155 9f5d:A (1.6) BS01 A1H9X ? GO:0003676 ... P09651 N/A
    817156 9f5e:A (1.45) BS01 JFP ? GO:0003676 ... P09651 N/A
    817157 9f5f:A (1.4) BS01 W0J ? GO:0003676 ... P09651 N/A
    817158 9f5g:A (1.8) BS01 Z9I ? GO:0003676 ... P09651 N/A
    817159 9f5k:A (1.7) BS01 ONQ ? GO:0003676 ... P09651 N/A
    817160 9f7f:A (1.55) BS01 WNM ? GO:0003676 ... P09651 N/A
    817161 9f7h:A (1.43) BS01 JFM ? GO:0003676 ... P09651 N/A
    817162 9f8x:A (1.498) BS01 CUA N/A GO:0005507 ... A0A368XMX8 38720157
    817163 9f8x:A (1.498) BS02 CUK N/A GO:0005507 ... A0A368XMX8 38720157
    817164 9f8x:A (1.498) BS03 CA N/A GO:0005507 ... A0A368XMX8 38720157
    817165 9f8x:A (1.498) BS04 CA N/A GO:0005507 ... A0A368XMX8 38720157
    817166 9f8x:B (1.498) BS01 CUA N/A GO:0005507 ... A0A368XMX8 38720157
    817167 9f8x:B (1.498) BS02 CUK N/A GO:0005507 ... A0A368XMX8 38720157
    817168 9f8x:B (1.498) BS03 CA N/A GO:0005507 ... A0A368XMX8 38720157
    817169 9f8x:B (1.498) BS04 CA N/A GO:0005507 ... A0A368XMX8 38720157
    817170 9f8x:C (1.498) BS01 CUA N/A GO:0005507 ... A0A368XMX8 38720157
    817171 9f8x:C (1.498) BS02 CUK N/A GO:0005507 ... A0A368XMX8 38720157
    817172 9f8x:C (1.498) BS03 CA N/A GO:0005507 ... A0A368XMX8 38720157
    817173 9f8x:C (1.498) BS04 CA N/A GO:0005507 ... A0A368XMX8 38720157
    817174 9f8x:D (1.498) BS01 CUA N/A GO:0005507 ... A0A368XMX8 38720157
    817175 9f8x:D (1.498) BS02 CUK N/A GO:0005507 ... A0A368XMX8 38720157
    817176 9f8x:D (1.498) BS03 CA N/A GO:0005507 ... A0A368XMX8 38720157
    817177 9f8x:D (1.498) BS04 CA N/A GO:0005507 ... A0A368XMX8 38720157
    817178 9f9z:A (2.279) BS01 A1IBI N/A GO:0004336 ... P04062 38932616
    817179 9fbv:0 (2.4) BS01 rna N/A GO:0000027 ... P0A7N9 38826346
    817180 9fbv:1 (2.4) BS01 rna N/A GO:0002181 ... P0A7P5 38826346
    817181 9fbv:2 (2.4) BS01 rna N/A GO:0002181 ... P0A7Q1 38826346
    817182 9fbv:3 (2.4) BS01 rna N/A GO:0002181 ... P0A7Q6 38826346
    817183 9fbv:3 (2.4) BS02 ZN N/A GO:0002181 ... P0A7Q6 38826346
    817184 9fbv:4 (2.4) BS01 rna N/A GO:0002181 ... P0A7M9 38826346
    817185 9fbv:4 (2.4) BS02 rna N/A GO:0002181 ... P0A7M9 38826346
    817186 9fbv:4 (2.4) BS03 ZN N/A GO:0002181 ... P0A7M9 38826346
    817187 9fbv:B (2.4) BS01 rna N/A GO:0000028 ... P0A7V0 38826346
    817188 9fbv:C (2.4) BS01 rna N/A GO:0000028 ... P0A7V3 38826346
    817189 9fbv:D (2.4) BS01 rna N/A GO:0000028 ... P0A7V8 38826346
    817190 9fbv:E (2.4) BS01 rna N/A GO:0000028 ... P0A7W1 38826346
    817191 9fbv:F (2.4) BS01 rna N/A GO:0002181 ... P02358 38826346
    817192 9fbv:G (2.4) BS01 rna N/A GO:0000028 ... P02359 38826346
    817193 9fbv:H (2.4) BS01 rna N/A GO:0000028 ... P0A7W7 38826346
    817194 9fbv:I (2.4) BS01 rna N/A GO:0000049 ... P0A7X3 38826346
    817195 9fbv:I (2.4) BS02 rna N/A GO:0000049 ... P0A7X3 38826346
    817196 9fbv:J (2.4) BS01 rna N/A GO:0000049 ... P0A7R5 38826346
    817197 9fbv:K (2.4) BS01 rna N/A GO:0002181 ... P0A7R9 38826346
    817198 9fbv:L (2.4) BS01 rna N/A GO:0000049 ... P0A7S3 38826346
    817199 9fbv:M (2.4) BS01 rna N/A GO:0000049 ... P0A7S9 38826346
    817200 9fbv:M (2.4) BS02 rna N/A GO:0000049 ... P0A7S9 38826346
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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