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BioLiP
Download all results in tab-seperated text for 817662 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    816201 9b33:F (4.07) BS01 ZN ? GO:0005509 ... C0HJY1 38778115
    816202 9b33:F (4.07) BS02 CA ? GO:0005509 ... C0HJY1 38778115
    816203 9b36:E (4.29) BS01 MAN ? GO:0005509 ... C0HJY1 38778115
    816204 9b36:E (4.29) BS02 ZN ? GO:0005509 ... C0HJY1 38778115
    816205 9b36:E (4.29) BS03 CA ? GO:0005509 ... C0HJY1 38778115
    816206 9b36:F (4.29) BS01 MAN ? GO:0005509 ... C0HJY1 38778115
    816207 9b36:F (4.29) BS02 ZN ? GO:0005509 ... C0HJY1 38778115
    816208 9b36:F (4.29) BS03 CA ? GO:0005509 ... C0HJY1 38778115
    816209 9b36:G (4.29) BS01 MAN ? GO:0005509 ... C0HJY1 38778115
    816210 9b36:G (4.29) BS02 ZN ? GO:0005509 ... C0HJY1 38778115
    816211 9b36:G (4.29) BS03 CA ? GO:0005509 ... C0HJY1 38778115
    816212 9b36:H (4.29) BS01 MAN ? GO:0005509 ... C0HJY1 38778115
    816213 9b36:H (4.29) BS02 ZN ? GO:0005509 ... C0HJY1 38778115
    816214 9b36:H (4.29) BS03 CA ? GO:0005509 ... C0HJY1 38778115
    816215 9b37:E (6.66) BS01 ZN ? GO:0005509 ... C0HJY1 38778115
    816216 9b37:E (6.66) BS02 CA ? GO:0005509 ... C0HJY1 38778115
    816217 9b37:F (6.66) BS01 MAN ? GO:0005509 ... C0HJY1 38778115
    816218 9b37:F (6.66) BS02 ZN ? GO:0005509 ... C0HJY1 38778115
    816219 9b37:F (6.66) BS03 CA ? GO:0005509 ... C0HJY1 38778115
    816220 9b3d:A (3.41) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    816221 9b3d:B (3.41) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    816222 9b3d:C (3.41) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    816223 9b3d:C (3.41) BS02 MG 3.6.4.- GO:0000287 ... P68135 38843827
    816224 9b3d:D (3.41) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    816225 9b3d:E (3.41) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    816226 9b3d:F (3.41) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    816227 9b3p:A (3.0) BS01 dna ? GO:0000775 ... P84243 38920622
    816228 9b3p:A (3.0) BS02 dna ? GO:0000775 ... P84243 38920622
    816229 9b3p:B (3.0) BS01 dna ? GO:0000786 ... P62799 38920622
    816230 9b3p:B (3.0) BS02 dna ? GO:0000786 ... P62799 38920622
    816231 9b3p:C (3.0) BS01 dna ? GO:0000786 ... P0C0S6 38920622
    816232 9b3p:C (3.0) BS02 dna ? GO:0000786 ... P0C0S6 38920622
    816233 9b3p:D (3.0) BS01 dna ? GO:0000786 ... P02281 38920622
    816234 9b3p:D (3.0) BS02 dna ? GO:0000786 ... P02281 38920622
    816235 9b3p:E (3.0) BS01 dna ? GO:0000775 ... P84243 38920622
    816236 9b3p:E (3.0) BS02 dna ? GO:0000775 ... P84243 38920622
    816237 9b3p:F (3.0) BS01 dna ? GO:0000786 ... P62799 38920622
    816238 9b3p:F (3.0) BS02 dna ? GO:0000786 ... P62799 38920622
    816239 9b3p:G (3.0) BS01 dna ? GO:0000786 ... P0C0S6 38920622
    816240 9b3p:G (3.0) BS02 dna ? GO:0000786 ... P0C0S6 38920622
    816241 9b3p:H (3.0) BS01 dna ? GO:0000786 ... P02281 38920622
    816242 9b3p:H (3.0) BS02 dna ? GO:0000786 ... P02281 38920622
    816243 9b3q:A (3.6) BS01 ADP 3.6.4.- GO:0000146 ... P68032 N/A
    816244 9b3q:D (3.6) BS01 ADP 3.6.4.- GO:0000146 ... P68032 N/A
    816245 9b3q:E (3.6) BS01 ADP 3.6.4.- GO:0000146 ... P68032 N/A
    816246 9b3r:A (3.5) BS01 ADP 3.6.4.- GO:0000146 ... P68032 N/A
    816247 9b3r:D (3.5) BS01 ADP 3.6.4.- GO:0000146 ... P68032 N/A
    816248 9b3r:E (3.5) BS01 ADP 3.6.4.- GO:0000146 ... P68032 N/A
    816249 9b56:A (3.35) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    816250 9b58:A (3.39) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    816251 9b5c:A (2.5) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    816252 9b5c:A (2.5) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    816253 9b5c:C (2.5) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    816254 9b5d:A (2.8) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    816255 9b5d:A (2.8) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    816256 9b5d:C (2.8) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    816257 9b5e:A (2.81) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    816258 9b5e:A (2.81) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    816259 9b5e:C (2.81) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    816260 9b5f:A (2.78) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    816261 9b5f:A (2.78) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    816262 9b5f:C (2.78) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    816263 9b5g:A (2.67) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    816264 9b5g:A (2.67) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    816265 9b5g:C (2.67) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    816266 9b5h:A (2.69) BS01 POP 6.2.1.45 GO:0000287 ... O94609 39143218
    816267 9b5h:A (2.69) BS02 AMP 6.2.1.45 GO:0000287 ... O94609 39143218
    816268 9b5h:A (2.69) BS03 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    816269 9b5h:C (2.69) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    816270 9b5i:A (2.7) BS01 POP 6.2.1.45 GO:0000287 ... O94609 39143218
    816271 9b5i:A (2.7) BS02 AMP 6.2.1.45 GO:0000287 ... O94609 39143218
    816272 9b5i:A (2.7) BS03 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    816273 9b5j:A (2.86) BS01 AMP 6.2.1.45 GO:0000287 ... O94609 39143218
    816274 9b5j:A (2.86) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    816275 9b5k:A (3.16) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    816276 9b5k:C (3.16) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    816277 9b5l:A (3.3) BS01 AMP 6.2.1.45 GO:0000287 ... O94609 39143218
    816278 9b5l:A (3.3) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    816279 9b5l:C (3.3) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    816280 9b5m:A (2.79) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    816281 9b5m:A (2.79) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    816282 9b5m:C (2.79) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    816283 9b5n:A (3.12) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    816284 9b5n:A (3.12) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    816285 9b5n:C (3.12) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    816286 9b5o:A (3.19) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    816287 9b5o:A (3.19) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    816288 9b5o:C (3.19) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    816289 9b5p:A (3.08) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    816290 9b5p:A (3.08) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    816291 9b5p:C (3.08) BS01 peptide 2.3.2.23 GO:0000151 ... P46595 39143218
    816292 9b5p:C (3.08) BS02 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    816293 9b5q:A (2.95) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    816294 9b5q:A (2.95) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    816295 9b5q:C (2.95) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    816296 9b5r:A (2.95) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    816297 9b5r:A (2.95) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    816298 9b5r:C (2.95) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    816299 9b5s:A (2.96) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    816300 9b5s:A (2.96) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    816301 9b5t:A (3.16) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    816302 9b5t:A (3.16) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    816303 9b5u:A (3.67) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    816304 9b5v:A (3.94) BS01 MG 6.2.1.45 GO:0000287 ... O94609 39143218
    816305 9b5v:A (3.94) BS02 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    816306 9b5v:C (3.94) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    816307 9b5w:A (3.96) BS01 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    816308 9b5w:A (3.96) BS02 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    816309 9b5w:C (3.96) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    816310 9b5x:A (4.16) BS01 MG 6.2.1.45 GO:0000287 ... O94609 39143218
    816311 9b5x:A (4.16) BS02 ATP 6.2.1.45 GO:0000287 ... O94609 39143218
    816312 9b5x:A (4.16) BS03 A1AIV 6.2.1.45 GO:0000287 ... O94609 39143218
    816313 9b5x:C (4.16) BS01 A1AIV 2.3.2.23 GO:0000151 ... P46595 39143218
    816314 9b70:A (2.88) BS01 A1AI1 N/A GO:0005886 ... O66465 38877016
    816315 9b70:B (2.88) BS01 A1AI1 N/A GO:0005886 ... O66465 38877016
    816316 9b71:A (2.7) BS01 A1AI2 N/A GO:0005886 ... O66465 38877016
    816317 9b71:B (2.7) BS01 A1AI2 N/A GO:0005886 ... O66465 38877016
    816318 9b8o:H (3.2) BS01 peptide N/A GO:0005654 ... Q6P503 38900912
    816319 9b8o:a (3.2) BS01 MAN N/A GO:0000220 ... P25286 38900912
    816320 9b8o:a (3.2) BS02 GLC N/A GO:0000220 ... P25286 38900912
    816321 9b8o:a (3.2) BS03 WJP N/A GO:0000220 ... P25286 38900912
    816322 9b8o:a (3.2) BS04 LP3 N/A GO:0000220 ... P25286 38900912
    816323 9b8o:h (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    816324 9b8o:i (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    816325 9b8o:i (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    816326 9b8o:i (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    816327 9b8o:j (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    816328 9b8o:j (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    816329 9b8o:j (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    816330 9b8o:j (3.2) BS04 CLR N/A GO:0000220 ... P63081 38900912
    816331 9b8o:k (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    816332 9b8o:k (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    816333 9b8o:k (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    816334 9b8o:l (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    816335 9b8o:l (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    816336 9b8o:l (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    816337 9b8o:m (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    816338 9b8o:m (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    816339 9b8o:m (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    816340 9b8o:n (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    816341 9b8o:n (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    816342 9b8o:n (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    816343 9b8o:n (3.2) BS04 CLR N/A GO:0000220 ... P63081 38900912
    816344 9b8o:n (3.2) BS05 CLR N/A GO:0000220 ... P63081 38900912
    816345 9b8o:o (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    816346 9b8o:o (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    816347 9b8o:o (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    816348 9b8p:A (3.2) BS01 ADP N/A GO:0000221 ... D4A133 38900912
    816349 9b8p:D (3.2) BS01 ADP N/A GO:0000221 ... P62815 38900912
    816350 9b8w:A (3.1) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    816351 9b8w:A (3.1) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    816352 9b8w:B (3.1) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    816353 9b8w:B (3.1) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    816354 9b8w:C (3.1) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    816355 9b8w:C (3.1) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    816356 9b8w:D (3.1) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    816357 9b8w:D (3.1) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    816358 9b8x:A (3.0) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    816359 9b8x:A (3.0) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    816360 9b8y:A (3.2) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    816361 9b8y:A (3.2) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    816362 9b8y:A (3.2) BS03 DVT ? GO:0002250 ... Q8TD43 38750366
    816363 9b8y:B (3.2) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    816364 9b8y:B (3.2) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    816365 9b8y:B (3.2) BS03 DVT ? GO:0002250 ... Q8TD43 38750366
    816366 9b8y:C (3.2) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    816367 9b8y:C (3.2) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    816368 9b8y:C (3.2) BS03 DVT ? GO:0002250 ... Q8TD43 38750366
    816369 9b8y:D (3.2) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    816370 9b8y:D (3.2) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    816371 9b8y:D (3.2) BS03 DVT ? GO:0002250 ... Q8TD43 38750366
    816372 9b8z:A (3.4) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    816373 9b8z:A (3.4) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    816374 9b8z:A (3.4) BS03 DVT ? GO:0002250 ... Q8TD43 38750366
    816375 9b90:A (3.4) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    816376 9b90:A (3.4) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    816377 9b90:A (3.4) BS03 ATP ? GO:0002250 ... Q8TD43 38750366
    816378 9b90:B (3.4) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    816379 9b90:B (3.4) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    816380 9b90:B (3.4) BS03 ATP ? GO:0002250 ... Q8TD43 38750366
    816381 9b90:C (3.4) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    816382 9b90:C (3.4) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    816383 9b90:C (3.4) BS03 ATP ? GO:0002250 ... Q8TD43 38750366
    816384 9b90:D (3.4) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    816385 9b90:D (3.4) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    816386 9b90:D (3.4) BS03 ATP ? GO:0002250 ... Q8TD43 38750366
    816387 9b91:A (3.3) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    816388 9b91:A (3.3) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    816389 9b91:A (3.3) BS03 ATP ? GO:0002250 ... Q8TD43 38750366
    816390 9b92:A (3.5) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    816391 9b92:B (3.5) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    816392 9b92:C (3.5) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    816393 9b92:D (3.5) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    816394 9b94:A (3.1) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    816395 9b94:B (3.1) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    816396 9b94:C (3.1) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    816397 9b94:D (3.1) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    816398 9b9m:A (2.07) BS01 FE2 N/A GO:0016491 ... A0A0C7AN42 39220707
    816399 9b9m:B (2.07) BS01 FE2 N/A GO:0016491 ... A0A0C7AN42 39220707
    816400 9b9m:C (2.07) BS01 FE2 N/A GO:0016491 ... A0A0C7AN42 39220707

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218