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BioLiP
Download all results in tab-seperated text for 817662 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    800801 8tow:a (2.14) BS09 CLA N/A GO:0005506 ... P16033 38879008
    800802 8tow:a (2.14) BS10 PHO N/A GO:0005506 ... P16033 38879008
    800803 8tow:b (2.14) BS01 CLA N/A GO:0009523 ... P05429 38879008
    800804 8tow:b (2.14) BS02 CLA N/A GO:0009523 ... P05429 38879008
    800805 8tow:b (2.14) BS03 CLA N/A GO:0009523 ... P05429 38879008
    800806 8tow:b (2.14) BS04 CLA N/A GO:0009523 ... P05429 38879008
    800807 8tow:b (2.14) BS05 CLA N/A GO:0009523 ... P05429 38879008
    800808 8tow:b (2.14) BS06 CLA N/A GO:0009523 ... P05429 38879008
    800809 8tow:b (2.14) BS07 CLA N/A GO:0009523 ... P05429 38879008
    800810 8tow:b (2.14) BS08 CLA N/A GO:0009523 ... P05429 38879008
    800811 8tow:b (2.14) BS09 CLA N/A GO:0009523 ... P05429 38879008
    800812 8tow:b (2.14) BS10 CLA N/A GO:0009523 ... P05429 38879008
    800813 8tow:b (2.14) BS11 CLA N/A GO:0009523 ... P05429 38879008
    800814 8tow:b (2.14) BS12 CLA N/A GO:0009523 ... P05429 38879008
    800815 8tow:b (2.14) BS13 CLA N/A GO:0009523 ... P05429 38879008
    800816 8tow:b (2.14) BS14 CLA N/A GO:0009523 ... P05429 38879008
    800817 8tow:b (2.14) BS15 CLA N/A GO:0009523 ... P05429 38879008
    800818 8tow:b (2.14) BS16 CLA N/A GO:0009523 ... P05429 38879008
    800819 8tow:c (2.14) BS01 OEX N/A GO:0005737 ... P09193 38879008
    800820 8tow:c (2.14) BS02 CLA N/A GO:0005737 ... P09193 38879008
    800821 8tow:c (2.14) BS03 CLA N/A GO:0005737 ... P09193 38879008
    800822 8tow:c (2.14) BS04 CLA N/A GO:0005737 ... P09193 38879008
    800823 8tow:c (2.14) BS05 CLA N/A GO:0005737 ... P09193 38879008
    800824 8tow:c (2.14) BS06 CLA N/A GO:0005737 ... P09193 38879008
    800825 8tow:c (2.14) BS07 CLA N/A GO:0005737 ... P09193 38879008
    800826 8tow:c (2.14) BS08 CLA N/A GO:0005737 ... P09193 38879008
    800827 8tow:c (2.14) BS09 CLA N/A GO:0005737 ... P09193 38879008
    800828 8tow:c (2.14) BS10 CLA N/A GO:0005737 ... P09193 38879008
    800829 8tow:c (2.14) BS11 CLA N/A GO:0005737 ... P09193 38879008
    800830 8tow:c (2.14) BS12 CLA N/A GO:0005737 ... P09193 38879008
    800831 8tow:c (2.14) BS13 CLA N/A GO:0005737 ... P09193 38879008
    800832 8tow:c (2.14) BS14 CLA N/A GO:0005737 ... P09193 38879008
    800833 8tow:d (2.14) BS01 FE2 N/A GO:0005506 ... P09192 38879008
    800834 8tow:d (2.14) BS02 CLA N/A GO:0005506 ... P09192 38879008
    800835 8tow:d (2.14) BS03 PHO N/A GO:0005506 ... P09192 38879008
    800836 8tow:d (2.14) BS04 BCT N/A GO:0005506 ... P09192 38879008
    800837 8tow:d (2.14) BS05 CLA N/A GO:0005506 ... P09192 38879008
    800838 8tow:d (2.14) BS06 CLA N/A GO:0005506 ... P09192 38879008
    800839 8tow:d (2.14) BS07 PHO N/A GO:0005506 ... P09192 38879008
    800840 8tow:d (2.14) BS08 CLA N/A GO:0005506 ... P09192 38879008
    800841 8tow:d (2.14) BS09 CLA N/A GO:0005506 ... P09192 38879008
    800842 8tow:e (2.14) BS01 HEM N/A GO:0005506 ... P09190 38879008
    800843 8tow:f (2.14) BS01 HEM N/A GO:0005506 ... P09191 38879008
    800844 8tow:h (2.14) BS01 CLA N/A GO:0009523 ... P14835 38879008
    800845 8tow:h (2.14) BS02 CLA N/A GO:0009523 ... P14835 38879008
    800846 8tow:h (2.14) BS03 CLA N/A GO:0009523 ... P14835 38879008
    800847 8tow:h (2.14) BS04 CLA N/A GO:0009523 ... P14835 38879008
    800848 8tow:h (2.14) BS05 RRX N/A GO:0009523 ... P14835 38879008
    800849 8tow:i (2.14) BS01 CLA N/A GO:0005737 ... Q54697 38879008
    800850 8tow:i (2.14) BS02 CLA N/A GO:0005737 ... Q54697 38879008
    800851 8tow:k (2.14) BS01 CLA N/A GO:0005737 ... P15819 38879008
    800852 8tow:k (2.14) BS02 CLA N/A GO:0005737 ... P15819 38879008
    800853 8tow:k (2.14) BS03 CA N/A GO:0005737 ... P15819 38879008
    800854 8tow:m (2.14) BS01 CLA N/A GO:0005737 ... P72701 38879008
    800855 8tow:x (2.14) BS01 CLA N/A GO:0009523 ... P72575 38879008
    800856 8tow:z (2.14) BS01 CLA N/A GO:0009523 ... P73528 38879008
    800857 8tp1:A (3.02) BS01 ATP ? GO:0005524 ... Q9CZP5 38821922
    800858 8tp1:A (3.02) BS02 ATP ? GO:0005524 ... Q9CZP5 38821922
    800859 8tp1:B (3.02) BS01 ATP ? GO:0005524 ... Q9CZP5 38821922
    800860 8tp1:B (3.02) BS02 ATP ? GO:0005524 ... Q9CZP5 38821922
    800861 8tp1:B (3.02) BS03 MG ? GO:0005524 ... Q9CZP5 38821922
    800862 8tp1:C (3.02) BS01 ATP ? GO:0005524 ... Q9CZP5 38821922
    800863 8tp1:C (3.02) BS02 ATP ? GO:0005524 ... Q9CZP5 38821922
    800864 8tp1:C (3.02) BS03 MG ? GO:0005524 ... Q9CZP5 38821922
    800865 8tp1:D (3.02) BS01 ATP ? GO:0005524 ... Q9CZP5 38821922
    800866 8tp1:D (3.02) BS02 ATP ? GO:0005524 ... Q9CZP5 38821922
    800867 8tp1:D (3.02) BS03 MG ? GO:0005524 ... Q9CZP5 38821922
    800868 8tp1:E (3.02) BS01 ATP ? GO:0005524 ... Q9CZP5 38821922
    800869 8tp1:E (3.02) BS02 ATP ? GO:0005524 ... Q9CZP5 38821922
    800870 8tp1:E (3.02) BS03 MG ? GO:0005524 ... Q9CZP5 38821922
    800871 8tp1:F (3.02) BS01 ATP ? GO:0005524 ... Q9CZP5 38821922
    800872 8tp1:F (3.02) BS02 ATP ? GO:0005524 ... Q9CZP5 38821922
    800873 8tp1:F (3.02) BS03 MG ? GO:0005524 ... Q9CZP5 38821922
    800874 8tp1:G (3.02) BS01 ATP ? GO:0005524 ... Q9CZP5 38821922
    800875 8tp1:G (3.02) BS02 ATP ? GO:0005524 ... Q9CZP5 38821922
    800876 8tp1:G (3.02) BS03 MG ? GO:0005524 ... Q9CZP5 38821922
    800877 8tpb:A (1.88) BS01 JVX 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 38192109
    800878 8tpb:B (1.88) BS01 JVX 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 38192109
    800879 8tpc:A (1.73) BS01 JJC 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 38192109
    800880 8tpd:A (1.68) BS01 JJO 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 38192109
    800881 8tpe:A (1.61) BS01 JK0 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 38192109
    800882 8tpe:B (1.61) BS01 JK0 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 38192109
    800883 8tpf:A (1.95) BS01 JWI 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 38192109
    800884 8tpg:A (1.692) BS01 JKL 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 38192109
    800885 8tph:A (1.52) BS01 JKL 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 38192109
    800886 8tpi:A (1.98) BS01 JWO 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 38192109
    800887 8tpj:A (2.1) BS01 CYC 4.-.-.- GO:0005515 ... Q55544 38578996
    800888 8tpj:A (2.1) BS02 CYC 4.-.-.- GO:0005515 ... Q55544 38578996
    800889 8tpj:A (2.1) BS03 CYC 4.-.-.- GO:0005515 ... Q55544 38578996
    800890 8tpj:A (2.1) BS04 CYC 4.-.-.- GO:0005515 ... Q55544 38578996
    800891 8tpj:B (2.1) BS01 45D ? GO:0005515 ... P74102 38578996
    800892 8tpj:C (2.1) BS01 CYC ? GO:0009579 ... Q01950 38578996
    800893 8tpj:C (2.1) BS02 CYC ? GO:0009579 ... Q01950 38578996
    800894 8tpj:D (2.1) BS01 45D ? GO:0009579 ... Q01951 38578996
    800895 8tpj:D (2.1) BS02 CYC ? GO:0009579 ... Q01951 38578996
    800896 8tpj:E (2.1) BS01 CYC ? GO:0009579 ... Q01952 38578996
    800897 8tpj:E (2.1) BS02 CYC ? GO:0009579 ... Q01952 38578996
    800898 8tpj:F (2.1) BS01 CYC ? GO:0009579 ... Q01951 38578996
    800899 8tpj:G (2.1) BS01 CYC ? GO:0009579 ... Q01952 38578996
    800900 8tpj:G (2.1) BS02 CYC ? GO:0009579 ... Q01952 38578996
    800901 8tpj:H (2.1) BS01 CYC ? GO:0009579 ... Q01951 38578996
    800902 8tpj:I (2.1) BS01 CYC ? GO:0009579 ... Q01952 38578996
    800903 8tpj:I (2.1) BS02 CYC ? GO:0009579 ... Q01952 38578996
    800904 8tpj:J (2.1) BS01 peptide ? GO:0009579 ... Q01951 38578996
    800905 8tpj:J (2.1) BS02 CYC ? GO:0009579 ... Q01951 38578996
    800906 8tpj:K (2.1) BS01 peptide ? GO:0009579 ... Q01952 38578996
    800907 8tpj:K (2.1) BS02 CYC ? GO:0009579 ... Q01952 38578996
    800908 8tpj:K (2.1) BS03 CYC ? GO:0009579 ... Q01952 38578996
    800909 8tpj:L (2.1) BS01 CYC ? GO:0009579 ... Q01951 38578996
    800910 8tpj:M (2.1) BS01 CYC ? GO:0009579 ... Q01952 38578996
    800911 8tpj:M (2.1) BS02 CYC ? GO:0009579 ... Q01952 38578996
    800912 8tpj:N (2.1) BS01 peptide ? GO:0009579 ... Q01951 38578996
    800913 8tpj:N (2.1) BS02 CYC ? GO:0009579 ... Q01951 38578996
    800914 8tpj:O (2.1) BS01 CYC ? GO:0009579 ... Q01952 38578996
    800915 8tpj:O (2.1) BS02 CYC ? GO:0009579 ... Q01952 38578996
    800916 8tpl:A (3.46) BS01 ATP ? GO:0005524 ... Q9CZP5 38821922
    800917 8tpl:A (3.46) BS02 ATP ? GO:0005524 ... Q9CZP5 38821922
    800918 8tpl:B (3.46) BS01 ATP ? GO:0005524 ... Q9CZP5 38821922
    800919 8tpl:B (3.46) BS02 MG ? GO:0005524 ... Q9CZP5 38821922
    800920 8tpl:C (3.46) BS01 ATP ? GO:0005524 ... Q9CZP5 38821922
    800921 8tpl:C (3.46) BS02 ATP ? GO:0005524 ... Q9CZP5 38821922
    800922 8tpl:D (3.46) BS01 ATP ? GO:0005524 ... Q9CZP5 38821922
    800923 8tpl:E (3.46) BS01 ATP ? GO:0005524 ... Q9CZP5 38821922
    800924 8tpl:E (3.46) BS02 ATP ? GO:0005524 ... Q9CZP5 38821922
    800925 8tpl:F (3.46) BS01 ATP ? GO:0005524 ... Q9CZP5 38821922
    800926 8tpl:F (3.46) BS02 MG ? GO:0005524 ... Q9CZP5 38821922
    800927 8tpl:G (3.46) BS01 ATP ? GO:0005524 ... Q9CZP5 38821922
    800928 8tpl:G (3.46) BS02 MG ? GO:0005524 ... Q9CZP5 38821922
    800929 8tpm:A (2.93) BS01 PGW ? GO:0005254 ... C7Z7K1 38684930
    800930 8tpm:A (2.93) BS02 PGW ? GO:0005254 ... C7Z7K1 38684930
    800931 8tpm:A (2.93) BS03 PGW ? GO:0005254 ... C7Z7K1 38684930
    800932 8tpm:A (2.93) BS04 PGW ? GO:0005254 ... C7Z7K1 38684930
    800933 8tpm:A (2.93) BS05 PGW ? GO:0005254 ... C7Z7K1 38684930
    800934 8tpm:A (2.93) BS06 PGW ? GO:0005254 ... C7Z7K1 38684930
    800935 8tpm:A (2.93) BS07 PGW ? GO:0005254 ... C7Z7K1 38684930
    800936 8tpm:A (2.93) BS08 PGW ? GO:0005254 ... C7Z7K1 38684930
    800937 8tpm:B (2.93) BS01 PGW ? GO:0005254 ... C7Z7K1 38684930
    800938 8tpm:B (2.93) BS02 PGW ? GO:0005254 ... C7Z7K1 38684930
    800939 8tpm:B (2.93) BS03 PGW ? GO:0005254 ... C7Z7K1 38684930
    800940 8tpm:B (2.93) BS04 PGW ? GO:0005254 ... C7Z7K1 38684930
    800941 8tpm:B (2.93) BS05 PGW ? GO:0005254 ... C7Z7K1 38684930
    800942 8tpm:B (2.93) BS06 PGW ? GO:0005254 ... C7Z7K1 38684930
    800943 8tpm:B (2.93) BS07 PGW ? GO:0005254 ... C7Z7K1 38684930
    800944 8tpn:A (4.07) BS01 CA ? GO:0005254 ... C7Z7K1 38684930
    800945 8tpn:A (4.07) BS02 CA ? GO:0005254 ... C7Z7K1 38684930
    800946 8tpn:B (4.07) BS01 CA ? GO:0005254 ... C7Z7K1 38684930
    800947 8tpn:B (4.07) BS02 CA ? GO:0005254 ... C7Z7K1 38684930
    800948 8tpo:A (3.59) BS01 CA ? GO:0005254 ... C7Z7K1 38684930
    800949 8tpo:A (3.59) BS02 CA ? GO:0005254 ... C7Z7K1 38684930
    800950 8tpo:A (3.59) BS03 PGW ? GO:0005254 ... C7Z7K1 38684930
    800951 8tpo:B (3.59) BS01 CA ? GO:0005254 ... C7Z7K1 38684930
    800952 8tpo:B (3.59) BS02 CA ? GO:0005254 ... C7Z7K1 38684930
    800953 8tpo:B (3.59) BS03 PGW ? GO:0005254 ... C7Z7K1 38684930
    800954 8tpp:A (3.64) BS01 CA ? GO:0005254 ... C7Z7K1 38684930
    800955 8tpp:A (3.64) BS02 CA ? GO:0005254 ... C7Z7K1 38684930
    800956 8tpp:B (3.64) BS01 CA ? GO:0005254 ... C7Z7K1 38684930
    800957 8tpp:B (3.64) BS02 CA ? GO:0005254 ... C7Z7K1 38684930
    800958 8tpq:A (3.35) BS01 CA ? GO:0005254 ... C7Z7K1 38684930
    800959 8tpq:A (3.35) BS02 CA ? GO:0005254 ... C7Z7K1 38684930
    800960 8tpq:A (3.35) BS03 PGW ? GO:0005254 ... C7Z7K1 38684930
    800961 8tpq:B (3.35) BS01 CA ? GO:0005254 ... C7Z7K1 38684930
    800962 8tpq:B (3.35) BS02 CA ? GO:0005254 ... C7Z7K1 38684930
    800963 8tpq:B (3.35) BS03 PGW ? GO:0005254 ... C7Z7K1 38684930
    800964 8tpr:A (2.85) BS01 CA ? GO:0005254 ... C7Z7K1 38684930
    800965 8tpr:A (2.85) BS02 CA ? GO:0005254 ... C7Z7K1 38684930
    800966 8tpr:A (2.85) BS03 PGW ? GO:0005254 ... C7Z7K1 38684930
    800967 8tpr:A (2.85) BS04 PGW ? GO:0005254 ... C7Z7K1 38684930
    800968 8tpr:B (2.85) BS01 CA ? GO:0005254 ... C7Z7K1 38684930
    800969 8tpr:B (2.85) BS02 CA ? GO:0005254 ... C7Z7K1 38684930
    800970 8tpr:B (2.85) BS03 PGW ? GO:0005254 ... C7Z7K1 38684930
    800971 8tpr:B (2.85) BS04 PGW ? GO:0005254 ... C7Z7K1 38684930
    800972 8tps:A (2.97) BS01 CA ? GO:0005254 ... C7Z7K1 38684930
    800973 8tps:A (2.97) BS02 PGW ? GO:0005254 ... C7Z7K1 38684930
    800974 8tps:A (2.97) BS03 PGW ? GO:0005254 ... C7Z7K1 38684930
    800975 8tps:A (2.97) BS04 PGW ? GO:0005254 ... C7Z7K1 38684930
    800976 8tps:B (2.97) BS01 PGW ? GO:0005254 ... C7Z7K1 38684930
    800977 8tps:B (2.97) BS02 CA ? GO:0005254 ... C7Z7K1 38684930
    800978 8tps:B (2.97) BS03 PGW ? GO:0005254 ... C7Z7K1 38684930
    800979 8tps:B (2.97) BS04 PGW ? GO:0005254 ... C7Z7K1 38684930
    800980 8tpt:A (3.01) BS01 CA ? GO:0005254 ... C7Z7K1 38684930
    800981 8tpt:A (3.01) BS02 CA ? GO:0005254 ... C7Z7K1 38684930
    800982 8tpt:A (3.01) BS03 PGW ? GO:0005254 ... C7Z7K1 38684930
    800983 8tpt:A (3.01) BS04 PGW ? GO:0005254 ... C7Z7K1 38684930
    800984 8tpt:B (3.01) BS01 CA ? GO:0005254 ... C7Z7K1 38684930
    800985 8tpt:B (3.01) BS02 CA ? GO:0005254 ... C7Z7K1 38684930
    800986 8tpt:B (3.01) BS03 PGW ? GO:0005254 ... C7Z7K1 38684930
    800987 8tpt:B (3.01) BS04 PGW ? GO:0005254 ... C7Z7K1 38684930
    800988 8tpv:A (2.27) BS01 JEI 2.4.2.8 GO:0000166 ... P00492 38651522
    800989 8tpv:A (2.27) BS02 MG 2.4.2.8 GO:0000166 ... P00492 38651522
    800990 8tpv:B (2.27) BS01 JEI 2.4.2.8 GO:0000166 ... P00492 38651522
    800991 8tpv:B (2.27) BS02 MG 2.4.2.8 GO:0000166 ... P00492 38651522
    800992 8tpv:C (2.27) BS01 JEI 2.4.2.8 GO:0000166 ... P00492 38651522
    800993 8tpv:C (2.27) BS02 MG 2.4.2.8 GO:0000166 ... P00492 38651522
    800994 8tpv:D (2.27) BS01 JEI 2.4.2.8 GO:0000166 ... P00492 38651522
    800995 8tpv:D (2.27) BS02 MG 2.4.2.8 GO:0000166 ... P00492 38651522
    800996 8tpy:A (2.5) BS01 JG6 2.4.2.8 GO:0000166 ... P00492 38651522
    800997 8tpy:A (2.5) BS02 MG 2.4.2.8 GO:0000166 ... P00492 38651522
    800998 8tpy:B (2.5) BS01 JG6 2.4.2.8 GO:0000166 ... P00492 38651522
    800999 8tpy:B (2.5) BS02 MG 2.4.2.8 GO:0000166 ... P00492 38651522
    801000 8tpy:C (2.5) BS01 JG6 2.4.2.8 GO:0000166 ... P00492 38651522

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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