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BioLiP
Download all results in tab-seperated text for 817662 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    791801 8rfr:A (1.4) BS01 FRU N/A GO:0016491 ... Q89EJ6 39002715
    791802 8rfr:A (1.4) BS02 CU N/A GO:0016491 ... Q89EJ6 39002715
    791803 8rfr:A (1.4) BS03 CU N/A GO:0016491 ... Q89EJ6 39002715
    791804 8rfr:A (1.4) BS04 NO2 N/A GO:0016491 ... Q89EJ6 39002715
    791805 8rfr:A (1.4) BS05 NO N/A GO:0016491 ... Q89EJ6 39002715
    791806 8rfs:A (1.54) BS01 FRU N/A GO:0016491 ... Q89EJ6 39002715
    791807 8rfs:A (1.54) BS02 CU N/A GO:0016491 ... Q89EJ6 39002715
    791808 8rfs:A (1.54) BS03 CU N/A GO:0016491 ... Q89EJ6 39002715
    791809 8rft:A (1.7) BS01 FRU N/A GO:0016491 ... Q89EJ6 39002715
    791810 8rft:A (1.7) BS02 CU N/A GO:0016491 ... Q89EJ6 39002715
    791811 8rft:A (1.7) BS03 CU N/A GO:0016491 ... Q89EJ6 39002715
    791812 8rfu:A (2.18) BS01 FRU N/A GO:0016491 ... Q89EJ6 39002715
    791813 8rfu:A (2.18) BS02 CU N/A GO:0016491 ... Q89EJ6 39002715
    791814 8rfu:A (2.18) BS03 CU N/A GO:0016491 ... Q89EJ6 39002715
    791815 8rfu:A (2.18) BS04 NO2 N/A GO:0016491 ... Q89EJ6 39002715
    791816 8rfv:A (1.31) BS01 CU N/A GO:0016491 ... H0SLX7 39002715
    791817 8rfv:A (1.31) BS02 CU N/A GO:0016491 ... H0SLX7 39002715
    791818 8rfw:A (1.33) BS01 CU N/A GO:0016491 ... H0SLX7 39002715
    791819 8rfw:A (1.33) BS02 CU N/A GO:0016491 ... H0SLX7 39002715
    791820 8rfx:A (1.4) BS01 CU N/A GO:0016491 ... H0SLX7 39002715
    791821 8rfx:A (1.4) BS02 CU N/A GO:0016491 ... H0SLX7 39002715
    791822 8rfy:A (1.79) BS01 CU N/A GO:0016491 ... H0SLX7 39002715
    791823 8rfy:A (1.79) BS02 CU N/A GO:0016491 ... H0SLX7 39002715
    791824 8rg1:A (1.19) BS01 A1H0D 1.1.5.2 GO:0008876 ... P13650 38687614
    791825 8rg1:A (1.19) BS02 CA 1.1.5.2 GO:0008876 ... P13650 38687614
    791826 8rg1:A (1.19) BS03 CA 1.1.5.2 GO:0008876 ... P13650 38687614
    791827 8rg1:A (1.19) BS04 CA 1.1.5.2 GO:0008876 ... P13650 38687614
    791828 8rg1:B (1.19) BS01 A1H0D 1.1.5.2 GO:0008876 ... P13650 38687614
    791829 8rg1:B (1.19) BS02 CA 1.1.5.2 GO:0008876 ... P13650 38687614
    791830 8rg1:B (1.19) BS03 CA 1.1.5.2 GO:0008876 ... P13650 38687614
    791831 8rg1:B (1.19) BS04 CA 1.1.5.2 GO:0008876 ... P13650 38687614
    791832 8rg8:A (1.21) BS01 GLC N/A GO:0016491 ... H0SLX7 39002715
    791833 8rg8:A (1.21) BS02 GLC N/A GO:0016491 ... H0SLX7 39002715
    791834 8rg8:A (1.21) BS03 GLC N/A GO:0016491 ... H0SLX7 39002715
    791835 8rg8:A (1.21) BS04 FRU N/A GO:0016491 ... H0SLX7 39002715
    791836 8rg8:A (1.21) BS05 CU N/A GO:0016491 ... H0SLX7 39002715
    791837 8rg8:A (1.21) BS06 CU N/A GO:0016491 ... H0SLX7 39002715
    791838 8rg8:A (1.21) BS07 NO2 N/A GO:0016491 ... H0SLX7 39002715
    791839 8rg8:A (1.21) BS08 NO2 N/A GO:0016491 ... H0SLX7 39002715
    791840 8rg8:A (1.21) BS09 NO2 N/A GO:0016491 ... H0SLX7 39002715
    791841 8rg8:A (1.21) BS10 NO N/A GO:0016491 ... H0SLX7 39002715
    791842 8rg9:A (1.25) BS01 GLC N/A GO:0016491 ... H0SLX7 39002715
    791843 8rg9:A (1.25) BS02 GLC N/A GO:0016491 ... H0SLX7 39002715
    791844 8rg9:A (1.25) BS03 GLC N/A GO:0016491 ... H0SLX7 39002715
    791845 8rg9:A (1.25) BS04 FRU N/A GO:0016491 ... H0SLX7 39002715
    791846 8rg9:A (1.25) BS05 CU N/A GO:0016491 ... H0SLX7 39002715
    791847 8rg9:A (1.25) BS06 CU N/A GO:0016491 ... H0SLX7 39002715
    791848 8rg9:A (1.25) BS07 NO2 N/A GO:0016491 ... H0SLX7 39002715
    791849 8rg9:A (1.25) BS08 NO2 N/A GO:0016491 ... H0SLX7 39002715
    791850 8rg9:A (1.25) BS09 NO2 N/A GO:0016491 ... H0SLX7 39002715
    791851 8rg9:A (1.25) BS10 NO N/A GO:0016491 ... H0SLX7 39002715
    791852 8rgb:A (1.39) BS01 GLC N/A GO:0016491 ... H0SLX7 39002715
    791853 8rgb:A (1.39) BS02 GLC N/A GO:0016491 ... H0SLX7 39002715
    791854 8rgb:A (1.39) BS03 GLC N/A GO:0016491 ... H0SLX7 39002715
    791855 8rgb:A (1.39) BS04 FRU N/A GO:0016491 ... H0SLX7 39002715
    791856 8rgb:A (1.39) BS05 CU N/A GO:0016491 ... H0SLX7 39002715
    791857 8rgb:A (1.39) BS06 CU N/A GO:0016491 ... H0SLX7 39002715
    791858 8rgb:A (1.39) BS07 NO2 N/A GO:0016491 ... H0SLX7 39002715
    791859 8rgb:A (1.39) BS08 NO2 N/A GO:0016491 ... H0SLX7 39002715
    791860 8rgb:A (1.39) BS09 NO N/A GO:0016491 ... H0SLX7 39002715
    791861 8rgb:A (1.39) BS10 NO N/A GO:0016491 ... H0SLX7 39002715
    791862 8rgc:A (1.55) BS01 GLC N/A GO:0016491 ... H0SLX7 39002715
    791863 8rgc:A (1.55) BS02 FRU N/A GO:0016491 ... H0SLX7 39002715
    791864 8rgc:A (1.55) BS03 GLC N/A GO:0016491 ... H0SLX7 39002715
    791865 8rgc:A (1.55) BS04 GLC N/A GO:0016491 ... H0SLX7 39002715
    791866 8rgc:A (1.55) BS05 FRU N/A GO:0016491 ... H0SLX7 39002715
    791867 8rgc:A (1.55) BS06 CU N/A GO:0016491 ... H0SLX7 39002715
    791868 8rgc:A (1.55) BS07 CU N/A GO:0016491 ... H0SLX7 39002715
    791869 8rgc:A (1.55) BS08 NO2 N/A GO:0016491 ... H0SLX7 39002715
    791870 8rgc:A (1.55) BS09 NO2 N/A GO:0016491 ... H0SLX7 39002715
    791871 8rgc:A (1.55) BS10 NO N/A GO:0016491 ... H0SLX7 39002715
    791872 8rgd:A (1.71) BS01 GLC N/A GO:0016491 ... H0SLX7 39002715
    791873 8rgd:A (1.71) BS02 GLC N/A GO:0016491 ... H0SLX7 39002715
    791874 8rgd:A (1.71) BS03 GLC N/A GO:0016491 ... H0SLX7 39002715
    791875 8rgd:A (1.71) BS04 FRU N/A GO:0016491 ... H0SLX7 39002715
    791876 8rgd:A (1.71) BS05 CU N/A GO:0016491 ... H0SLX7 39002715
    791877 8rgd:A (1.71) BS06 CU N/A GO:0016491 ... H0SLX7 39002715
    791878 8rgd:A (1.71) BS07 NO2 N/A GO:0016491 ... H0SLX7 39002715
    791879 8rgd:A (1.71) BS08 NO2 N/A GO:0016491 ... H0SLX7 39002715
    791880 8rgd:A (1.71) BS09 NO N/A GO:0016491 ... H0SLX7 39002715
    791881 8rgd:A (1.71) BS10 NO N/A GO:0016491 ... H0SLX7 39002715
    791882 8rgh:A (3.9) BS01 peptide 2.1.1.63 GO:0001822 ... P16455
    Q8NCM8
    38454149
    791883 8rgh:C (3.9) BS01 peptide ? GO:0000242 ... Q8WVS4 38454149
    791884 8rgp:1 (3.0) BS01 FMN 7.1.1.2 GO:0005515 ... Q91YT0 38575788
    791885 8rgp:1 (3.0) BS02 SF4 7.1.1.2 GO:0005515 ... Q91YT0 38575788
    791886 8rgp:2 (3.0) BS01 FES 7.1.1.2 GO:0005739 ... Q9D6J6 38575788
    791887 8rgp:3 (3.0) BS01 SF4 7.1.1.2 GO:0005515 ... Q91VD9 38575788
    791888 8rgp:3 (3.0) BS02 SF4 7.1.1.2 GO:0005515 ... Q91VD9 38575788
    791889 8rgp:3 (3.0) BS03 FES 7.1.1.2 GO:0005515 ... Q91VD9 38575788
    791890 8rgp:6 (3.0) BS01 SF4 7.1.1.2 GO:0003954 ... Q9DC70 38575788
    791891 8rgp:6 (3.0) BS02 UQ 7.1.1.2 GO:0003954 ... Q9DC70 38575788
    791892 8rgp:7 (3.0) BS01 ZN ? GO:0001822 ... P52503 38575788
    791893 8rgp:9 (3.0) BS01 SF4 7.1.1.2 GO:0003954 ... Q8K3J1 38575788
    791894 8rgp:9 (3.0) BS02 SF4 7.1.1.2 GO:0003954 ... Q8K3J1 38575788
    791895 8rgp:D (3.0) BS01 SF4 7.1.1.2 GO:0003954 ... Q91WD5 38575788
    791896 8rgp:D (3.0) BS02 UQ 7.1.1.2 GO:0003954 ... Q91WD5 38575788
    791897 8rgp:H (3.0) BS01 UQ 7.1.1.2 GO:0001666 ... P03888 38575788
    791898 8rgp:O (3.0) BS01 DGT ? GO:0005739 ... Q99LC3 38575788
    791899 8rgp:P (3.0) BS01 NDP ? GO:0003954 ... Q9DC69 38575788
    791900 8rgp:W (3.0) BS01 ZMP ? GO:0003674 ... Q9CQZ5 38575788
    791901 8rgp:n (3.0) BS01 ZMP ? GO:0005739 ... Q9CQJ8 38575788
    791902 8rgq:1 (3.0) BS01 FMN 7.1.1.2 GO:0005515 ... Q91YT0 38575788
    791903 8rgq:1 (3.0) BS02 SF4 7.1.1.2 GO:0005515 ... Q91YT0 38575788
    791904 8rgq:2 (3.0) BS01 FES 7.1.1.2 GO:0005739 ... Q9D6J6 38575788
    791905 8rgq:3 (3.0) BS01 SF4 7.1.1.2 GO:0005515 ... Q91VD9 38575788
    791906 8rgq:3 (3.0) BS02 SF4 7.1.1.2 GO:0005515 ... Q91VD9 38575788
    791907 8rgq:3 (3.0) BS03 FES 7.1.1.2 GO:0005515 ... Q91VD9 38575788
    791908 8rgq:6 (3.0) BS01 SF4 7.1.1.2 GO:0003954 ... Q9DC70 38575788
    791909 8rgq:7 (3.0) BS01 ZN ? GO:0001822 ... P52503 38575788
    791910 8rgq:9 (3.0) BS01 SF4 7.1.1.2 GO:0003954 ... Q8K3J1 38575788
    791911 8rgq:9 (3.0) BS02 SF4 7.1.1.2 GO:0003954 ... Q8K3J1 38575788
    791912 8rgq:D (3.0) BS01 SF4 7.1.1.2 GO:0003954 ... Q91WD5 38575788
    791913 8rgq:O (3.0) BS01 DGT ? GO:0005739 ... Q99LC3 38575788
    791914 8rgq:P (3.0) BS01 NDP ? GO:0003954 ... Q9DC69 38575788
    791915 8rgq:W (3.0) BS01 ZMP ? GO:0003674 ... Q9CQZ5 38575788
    791916 8rgq:n (3.0) BS01 ZMP ? GO:0005739 ... Q9CQJ8 38575788
    791917 8rgr:1 (2.9) BS01 FMN 7.1.1.2 GO:0005515 ... Q91YT0 38575788
    791918 8rgr:1 (2.9) BS02 SF4 7.1.1.2 GO:0005515 ... Q91YT0 38575788
    791919 8rgr:2 (2.9) BS01 FES 7.1.1.2 GO:0005739 ... Q9D6J6 38575788
    791920 8rgr:3 (2.9) BS01 SF4 7.1.1.2 GO:0005515 ... Q91VD9 38575788
    791921 8rgr:3 (2.9) BS02 SF4 7.1.1.2 GO:0005515 ... Q91VD9 38575788
    791922 8rgr:3 (2.9) BS03 FES 7.1.1.2 GO:0005515 ... Q91VD9 38575788
    791923 8rgr:6 (2.9) BS01 SF4 7.1.1.2 GO:0003954 ... Q9DC70 38575788
    791924 8rgr:6 (2.9) BS02 UQ 7.1.1.2 GO:0003954 ... Q9DC70 38575788
    791925 8rgr:7 (2.9) BS01 ZN ? GO:0001822 ... P52503 38575788
    791926 8rgr:9 (2.9) BS01 SF4 7.1.1.2 GO:0003954 ... Q8K3J1 38575788
    791927 8rgr:9 (2.9) BS02 SF4 7.1.1.2 GO:0003954 ... Q8K3J1 38575788
    791928 8rgr:D (2.9) BS01 SF4 7.1.1.2 GO:0003954 ... Q91WD5 38575788
    791929 8rgr:D (2.9) BS02 UQ 7.1.1.2 GO:0003954 ... Q91WD5 38575788
    791930 8rgr:H (2.9) BS01 UQ 7.1.1.2 GO:0001666 ... P03888 38575788
    791931 8rgr:O (2.9) BS01 DGT ? GO:0005739 ... Q99LC3 38575788
    791932 8rgr:P (2.9) BS01 NDP ? GO:0003954 ... Q9DC69 38575788
    791933 8rgr:W (2.9) BS01 ZMP ? GO:0003674 ... Q9CQZ5 38575788
    791934 8rgr:n (2.9) BS01 ZMP ? GO:0005739 ... Q9CQJ8 38575788
    791935 8rgs:A (1.79) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... A0A7U9DT46 38488731
    791936 8rgs:B (1.79) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... A0A7U9DT46 38488731
    791937 8rgt:1 (3.1) BS01 FMN 7.1.1.2 GO:0005515 ... Q91YT0 38575788
    791938 8rgt:1 (3.1) BS02 SF4 7.1.1.2 GO:0005515 ... Q91YT0 38575788
    791939 8rgt:2 (3.1) BS01 FES 7.1.1.2 GO:0005739 ... Q9D6J6 38575788
    791940 8rgt:3 (3.1) BS01 SF4 7.1.1.2 GO:0005515 ... Q91VD9 38575788
    791941 8rgt:3 (3.1) BS02 SF4 7.1.1.2 GO:0005515 ... Q91VD9 38575788
    791942 8rgt:3 (3.1) BS03 FES 7.1.1.2 GO:0005515 ... Q91VD9 38575788
    791943 8rgt:6 (3.1) BS01 SF4 7.1.1.2 GO:0003954 ... Q9DC70 38575788
    791944 8rgt:7 (3.1) BS01 ZN ? GO:0001822 ... P52503 38575788
    791945 8rgt:9 (3.1) BS01 SF4 7.1.1.2 GO:0003954 ... Q8K3J1 38575788
    791946 8rgt:9 (3.1) BS02 SF4 7.1.1.2 GO:0003954 ... Q8K3J1 38575788
    791947 8rgt:D (3.1) BS01 SF4 7.1.1.2 GO:0003954 ... Q91WD5 38575788
    791948 8rgt:O (3.1) BS01 DGT ? GO:0005739 ... Q99LC3 38575788
    791949 8rgt:P (3.1) BS01 NDP ? GO:0003954 ... Q9DC69 38575788
    791950 8rgt:T (3.1) BS01 ZMP ? GO:0005654 ... Q9CR21 38575788
    791951 8rgt:W (3.1) BS01 ZMP ? GO:0003674 ... Q9CQZ5 38575788
    791952 8rgt:n (3.1) BS01 ZMP ? GO:0005739 ... Q9CQJ8 38575788
    791953 8rgw:A (1.88) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... A0A7U9DT46 38488731
    791954 8rgw:B (1.88) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... A0A7U9DT46 38488731
    791955 8rgy:A (2.07) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... A0A7U9DT46 38488731
    791956 8rgy:B (2.07) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... A0A7U9DT46 38488731
    791957 8rh3:A (1.96) BS01 A1H0F ? GO:0009159 ... K9TVX3 38449528
    791958 8rh3:B (1.96) BS01 A1H0F ? GO:0009159 ... K9TVX3 38449528
    791959 8rh3:B (1.96) BS02 A1H0F ? GO:0009159 ... K9TVX3 38449528
    791960 8rh3:C (1.96) BS01 A1H0F ? GO:0009159 ... K9TVX3 38449528
    791961 8rh3:D (1.96) BS01 A1H0F ? GO:0009159 ... K9TVX3 38449528
    791962 8rh6:A (3.32) BS01 peptide ? GO:0006955 ... Q5S3G3 38742159
    791963 8rh6:C (3.32) BS01 peptide ? GO:0006955 ... Q5S3G3 38742159
    791964 8rh6:E (3.32) BS01 peptide ? GO:0006955 ... Q5S3G3 38742159
    791965 8rhe:A (1.95) BS01 BLG 4.2.2.- GO:0000270 ... Q9I2T2 38583835
    791966 8rhe:A (1.95) BS02 ZN 4.2.2.- GO:0000270 ... Q9I2T2 38583835
    791967 8rhe:A (1.95) BS03 ZN 4.2.2.- GO:0000270 ... Q9I2T2 38583835
    791968 8rhe:A (1.95) BS04 ZN 4.2.2.- GO:0000270 ... Q9I2T2 38583835
    791969 8rhe:B (1.95) BS01 BLG 4.2.2.- GO:0000270 ... Q9I2T2 38583835
    791970 8rhe:B (1.95) BS02 ZN 4.2.2.- GO:0000270 ... Q9I2T2 38583835
    791971 8rhe:B (1.95) BS03 ZN 4.2.2.- GO:0000270 ... Q9I2T2 38583835
    791972 8rhe:B (1.95) BS04 ZN 4.2.2.- GO:0000270 ... Q9I2T2 38583835
    791973 8rhf:A (1.95) BS01 BLG 4.2.2.- GO:0000270 ... Q9I2T2 38583835
    791974 8rhf:A (1.95) BS02 ZN 4.2.2.- GO:0000270 ... Q9I2T2 38583835
    791975 8rhf:A (1.95) BS03 ZN 4.2.2.- GO:0000270 ... Q9I2T2 38583835
    791976 8rhf:A (1.95) BS04 ZN 4.2.2.- GO:0000270 ... Q9I2T2 38583835
    791977 8rhf:B (1.95) BS01 BLG 4.2.2.- GO:0000270 ... Q9I2T2 38583835
    791978 8rhf:B (1.95) BS02 ZN 4.2.2.- GO:0000270 ... Q9I2T2 38583835
    791979 8rhf:B (1.95) BS03 ZN 4.2.2.- GO:0000270 ... Q9I2T2 38583835
    791980 8rhf:B (1.95) BS04 ZN 4.2.2.- GO:0000270 ... Q9I2T2 38583835
    791981 8rhi:A (1.98) BS01 BLG 4.2.2.- GO:0000270 ... Q9I2T2 38583835
    791982 8rhi:A (1.98) BS02 ZN 4.2.2.- GO:0000270 ... Q9I2T2 38583835
    791983 8rhi:A (1.98) BS03 ZN 4.2.2.- GO:0000270 ... Q9I2T2 38583835
    791984 8rhi:A (1.98) BS04 ZN 4.2.2.- GO:0000270 ... Q9I2T2 38583835
    791985 8rhi:A (1.98) BS05 ZN 4.2.2.- GO:0000270 ... Q9I2T2 38583835
    791986 8rhi:B (1.98) BS01 ZN 4.2.2.- GO:0000270 ... Q9I2T2 38583835
    791987 8rhi:B (1.98) BS02 BLG 4.2.2.- GO:0000270 ... Q9I2T2 38583835
    791988 8rhi:B (1.98) BS03 ZN 4.2.2.- GO:0000270 ... Q9I2T2 38583835
    791989 8rhi:B (1.98) BS04 ZN 4.2.2.- GO:0000270 ... Q9I2T2 38583835
    791990 8rhj:G (3.05) BS01 MG ? GO:0000502 ... P21243 38628795
    791991 8rhj:H (3.05) BS01 peptide 3.4.25.1 GO:0004298 ... P25043 38628795
    791992 8rhj:H (3.05) BS02 peptide 3.4.25.1 GO:0004298 ... P25043 38628795
    791993 8rhj:K (3.05) BS01 peptide 3.4.25.1 GO:0004298 ... P30656 38628795
    791994 8rhj:K (3.05) BS02 MG 3.4.25.1 GO:0004298 ... P30656 38628795
    791995 8rhj:L (3.05) BS01 peptide ? GO:0000502 ... P23724 38628795
    791996 8rhj:N (3.05) BS01 peptide 3.4.25.1 GO:0000502 ... P38624 38628795
    791997 8rhj:V (3.05) BS01 peptide 3.4.25.1 GO:0004298 ... P25043 38628795
    791998 8rhj:V (3.05) BS02 peptide 3.4.25.1 GO:0004298 ... P25043 38628795
    791999 8rhj:V (3.05) BS03 MG 3.4.25.1 GO:0004298 ... P25043 38628795
    792000 8rhj:Y (3.05) BS01 peptide 3.4.25.1 GO:0004298 ... P30656 38628795

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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