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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 832530 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    815201 8srd:C (2.91) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    815202 8srd:C (2.91) BS02 APR ? GO:0005216 ... F2UB89 N/A
    815203 8srd:C (2.91) BS03 MG ? GO:0005216 ... F2UB89 N/A
    815204 8srd:C (2.91) BS04 CLR ? GO:0005216 ... F2UB89 N/A
    815205 8srd:C (2.91) BS05 APR ? GO:0005216 ... F2UB89 N/A
    815206 8srd:C (2.91) BS06 CLR ? GO:0005216 ... F2UB89 N/A
    815207 8srd:D (2.91) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    815208 8srd:D (2.91) BS02 CLR ? GO:0005216 ... F2UB89 N/A
    815209 8srd:D (2.91) BS03 APR ? GO:0005216 ... F2UB89 N/A
    815210 8srd:D (2.91) BS04 MG ? GO:0005216 ... F2UB89 N/A
    815211 8srd:D (2.91) BS05 CLR ? GO:0005216 ... F2UB89 N/A
    815212 8srd:D (2.91) BS06 APR ? GO:0005216 ... F2UB89 N/A
    815213 8sre:A (2.52) BS01 APR ? GO:0005216 ... F2UB89 N/A
    815214 8sre:A (2.52) BS02 MG ? GO:0005216 ... F2UB89 N/A
    815215 8sre:A (2.52) BS03 MG ? GO:0005216 ... F2UB89 N/A
    815216 8sre:A (2.52) BS04 MG ? GO:0005216 ... F2UB89 N/A
    815217 8sre:A (2.52) BS05 MG ? GO:0005216 ... F2UB89 N/A
    815218 8sre:A (2.52) BS06 CLR ? GO:0005216 ... F2UB89 N/A
    815219 8sre:A (2.52) BS07 APR ? GO:0005216 ... F2UB89 N/A
    815220 8sre:A (2.52) BS08 CLR ? GO:0005216 ... F2UB89 N/A
    815221 8sre:A (2.52) BS09 CLR ? GO:0005216 ... F2UB89 N/A
    815222 8sre:A (2.52) BS10 CLR ? GO:0005216 ... F2UB89 N/A
    815223 8sre:B (2.52) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    815224 8sre:B (2.52) BS02 APR ? GO:0005216 ... F2UB89 N/A
    815225 8sre:B (2.52) BS03 MG ? GO:0005216 ... F2UB89 N/A
    815226 8sre:B (2.52) BS04 MG ? GO:0005216 ... F2UB89 N/A
    815227 8sre:B (2.52) BS05 MG ? GO:0005216 ... F2UB89 N/A
    815228 8sre:B (2.52) BS06 MG ? GO:0005216 ... F2UB89 N/A
    815229 8sre:B (2.52) BS07 CLR ? GO:0005216 ... F2UB89 N/A
    815230 8sre:B (2.52) BS08 APR ? GO:0005216 ... F2UB89 N/A
    815231 8sre:B (2.52) BS09 CLR ? GO:0005216 ... F2UB89 N/A
    815232 8sre:B (2.52) BS10 CLR ? GO:0005216 ... F2UB89 N/A
    815233 8sre:C (2.52) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    815234 8sre:C (2.52) BS02 CLR ? GO:0005216 ... F2UB89 N/A
    815235 8sre:C (2.52) BS03 CLR ? GO:0005216 ... F2UB89 N/A
    815236 8sre:C (2.52) BS04 APR ? GO:0005216 ... F2UB89 N/A
    815237 8sre:C (2.52) BS05 MG ? GO:0005216 ... F2UB89 N/A
    815238 8sre:C (2.52) BS06 MG ? GO:0005216 ... F2UB89 N/A
    815239 8sre:C (2.52) BS07 MG ? GO:0005216 ... F2UB89 N/A
    815240 8sre:C (2.52) BS08 MG ? GO:0005216 ... F2UB89 N/A
    815241 8sre:C (2.52) BS09 CLR ? GO:0005216 ... F2UB89 N/A
    815242 8sre:C (2.52) BS10 APR ? GO:0005216 ... F2UB89 N/A
    815243 8sre:D (2.52) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    815244 8sre:D (2.52) BS02 CLR ? GO:0005216 ... F2UB89 N/A
    815245 8sre:D (2.52) BS03 APR ? GO:0005216 ... F2UB89 N/A
    815246 8sre:D (2.52) BS04 MG ? GO:0005216 ... F2UB89 N/A
    815247 8sre:D (2.52) BS05 MG ? GO:0005216 ... F2UB89 N/A
    815248 8sre:D (2.52) BS06 MG ? GO:0005216 ... F2UB89 N/A
    815249 8sre:D (2.52) BS07 MG ? GO:0005216 ... F2UB89 N/A
    815250 8sre:D (2.52) BS08 CLR ? GO:0005216 ... F2UB89 N/A
    815251 8sre:D (2.52) BS09 APR ? GO:0005216 ... F2UB89 N/A
    815252 8sre:D (2.52) BS10 CLR ? GO:0005216 ... F2UB89 N/A
    815253 8srf:A (2.52) BS01 RP5 ? GO:0005216 ... F2UB89 N/A
    815254 8srf:A (2.52) BS02 AMP ? GO:0005216 ... F2UB89 N/A
    815255 8srf:A (2.52) BS03 APR ? GO:0005216 ... F2UB89 N/A
    815256 8srf:A (2.52) BS04 MG ? GO:0005216 ... F2UB89 N/A
    815257 8srf:A (2.52) BS05 MG ? GO:0005216 ... F2UB89 N/A
    815258 8srf:A (2.52) BS06 MG ? GO:0005216 ... F2UB89 N/A
    815259 8srf:A (2.52) BS07 MG ? GO:0005216 ... F2UB89 N/A
    815260 8srf:A (2.52) BS08 CLR ? GO:0005216 ... F2UB89 N/A
    815261 8srf:A (2.52) BS09 CLR ? GO:0005216 ... F2UB89 N/A
    815262 8srf:A (2.52) BS10 CLR ? GO:0005216 ... F2UB89 N/A
    815263 8srf:A (2.52) BS11 CLR ? GO:0005216 ... F2UB89 N/A
    815264 8srf:B (2.52) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    815265 8srf:B (2.52) BS02 RP5 ? GO:0005216 ... F2UB89 N/A
    815266 8srf:B (2.52) BS03 AMP ? GO:0005216 ... F2UB89 N/A
    815267 8srf:B (2.52) BS04 APR ? GO:0005216 ... F2UB89 N/A
    815268 8srf:B (2.52) BS05 MG ? GO:0005216 ... F2UB89 N/A
    815269 8srf:B (2.52) BS06 MG ? GO:0005216 ... F2UB89 N/A
    815270 8srf:B (2.52) BS07 MG ? GO:0005216 ... F2UB89 N/A
    815271 8srf:B (2.52) BS08 MG ? GO:0005216 ... F2UB89 N/A
    815272 8srf:B (2.52) BS09 CLR ? GO:0005216 ... F2UB89 N/A
    815273 8srf:B (2.52) BS10 CLR ? GO:0005216 ... F2UB89 N/A
    815274 8srf:B (2.52) BS11 CLR ? GO:0005216 ... F2UB89 N/A
    815275 8srf:C (2.52) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    815276 8srf:C (2.52) BS02 RP5 ? GO:0005216 ... F2UB89 N/A
    815277 8srf:C (2.52) BS03 AMP ? GO:0005216 ... F2UB89 N/A
    815278 8srf:C (2.52) BS04 APR ? GO:0005216 ... F2UB89 N/A
    815279 8srf:C (2.52) BS05 MG ? GO:0005216 ... F2UB89 N/A
    815280 8srf:C (2.52) BS06 MG ? GO:0005216 ... F2UB89 N/A
    815281 8srf:C (2.52) BS07 MG ? GO:0005216 ... F2UB89 N/A
    815282 8srf:C (2.52) BS08 MG ? GO:0005216 ... F2UB89 N/A
    815283 8srf:C (2.52) BS09 CLR ? GO:0005216 ... F2UB89 N/A
    815284 8srf:C (2.52) BS10 CLR ? GO:0005216 ... F2UB89 N/A
    815285 8srf:C (2.52) BS11 CLR ? GO:0005216 ... F2UB89 N/A
    815286 8srf:D (2.52) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    815287 8srf:D (2.52) BS02 CLR ? GO:0005216 ... F2UB89 N/A
    815288 8srf:D (2.52) BS03 CLR ? GO:0005216 ... F2UB89 N/A
    815289 8srf:D (2.52) BS04 RP5 ? GO:0005216 ... F2UB89 N/A
    815290 8srf:D (2.52) BS05 AMP ? GO:0005216 ... F2UB89 N/A
    815291 8srf:D (2.52) BS06 APR ? GO:0005216 ... F2UB89 N/A
    815292 8srf:D (2.52) BS07 MG ? GO:0005216 ... F2UB89 N/A
    815293 8srf:D (2.52) BS08 MG ? GO:0005216 ... F2UB89 N/A
    815294 8srf:D (2.52) BS09 MG ? GO:0005216 ... F2UB89 N/A
    815295 8srf:D (2.52) BS10 MG ? GO:0005216 ... F2UB89 N/A
    815296 8srf:D (2.52) BS11 CLR ? GO:0005216 ... F2UB89 N/A
    815297 8srg:A (3.03) BS01 RP5 ? GO:0005216 ... F2UB89 N/A
    815298 8srg:A (3.03) BS02 AMP ? GO:0005216 ... F2UB89 N/A
    815299 8srg:A (3.03) BS03 MG ? GO:0005216 ... F2UB89 N/A
    815300 8srg:A (3.03) BS04 MG ? GO:0005216 ... F2UB89 N/A
    815301 8srg:A (3.03) BS05 MG ? GO:0005216 ... F2UB89 N/A
    815302 8srg:A (3.03) BS06 CLR ? GO:0005216 ... F2UB89 N/A
    815303 8srg:A (3.03) BS07 CLR ? GO:0005216 ... F2UB89 N/A
    815304 8srg:A (3.03) BS08 CLR ? GO:0005216 ... F2UB89 N/A
    815305 8srg:A (3.03) BS09 CLR ? GO:0005216 ... F2UB89 N/A
    815306 8srg:B (3.03) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    815307 8srg:B (3.03) BS02 RP5 ? GO:0005216 ... F2UB89 N/A
    815308 8srg:B (3.03) BS03 AMP ? GO:0005216 ... F2UB89 N/A
    815309 8srg:B (3.03) BS04 MG ? GO:0005216 ... F2UB89 N/A
    815310 8srg:B (3.03) BS05 MG ? GO:0005216 ... F2UB89 N/A
    815311 8srg:B (3.03) BS06 MG ? GO:0005216 ... F2UB89 N/A
    815312 8srg:B (3.03) BS07 CLR ? GO:0005216 ... F2UB89 N/A
    815313 8srg:B (3.03) BS08 CLR ? GO:0005216 ... F2UB89 N/A
    815314 8srg:B (3.03) BS09 CLR ? GO:0005216 ... F2UB89 N/A
    815315 8srg:C (3.03) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    815316 8srg:C (3.03) BS02 RP5 ? GO:0005216 ... F2UB89 N/A
    815317 8srg:C (3.03) BS03 AMP ? GO:0005216 ... F2UB89 N/A
    815318 8srg:C (3.03) BS04 MG ? GO:0005216 ... F2UB89 N/A
    815319 8srg:C (3.03) BS05 MG ? GO:0005216 ... F2UB89 N/A
    815320 8srg:C (3.03) BS06 MG ? GO:0005216 ... F2UB89 N/A
    815321 8srg:C (3.03) BS07 CLR ? GO:0005216 ... F2UB89 N/A
    815322 8srg:C (3.03) BS08 CLR ? GO:0005216 ... F2UB89 N/A
    815323 8srg:C (3.03) BS09 CLR ? GO:0005216 ... F2UB89 N/A
    815324 8srg:D (3.03) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    815325 8srg:D (3.03) BS02 CLR ? GO:0005216 ... F2UB89 N/A
    815326 8srg:D (3.03) BS03 CLR ? GO:0005216 ... F2UB89 N/A
    815327 8srg:D (3.03) BS04 RP5 ? GO:0005216 ... F2UB89 N/A
    815328 8srg:D (3.03) BS05 AMP ? GO:0005216 ... F2UB89 N/A
    815329 8srg:D (3.03) BS06 MG ? GO:0005216 ... F2UB89 N/A
    815330 8srg:D (3.03) BS07 MG ? GO:0005216 ... F2UB89 N/A
    815331 8srg:D (3.03) BS08 MG ? GO:0005216 ... F2UB89 N/A
    815332 8srg:D (3.03) BS09 CLR ? GO:0005216 ... F2UB89 N/A
    815333 8srh:A (3.79) BS01 APR ? GO:0005216 ... F2UB89 N/A
    815334 8srh:A (3.79) BS02 MG ? GO:0005216 ... F2UB89 N/A
    815335 8srh:A (3.79) BS03 APR ? GO:0005216 ... F2UB89 N/A
    815336 8srh:A (3.79) BS04 CLR ? GO:0005216 ... F2UB89 N/A
    815337 8srh:A (3.79) BS05 CLR ? GO:0005216 ... F2UB89 N/A
    815338 8srh:A (3.79) BS06 CLR ? GO:0005216 ... F2UB89 N/A
    815339 8srh:B (3.79) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    815340 8srh:B (3.79) BS02 APR ? GO:0005216 ... F2UB89 N/A
    815341 8srh:B (3.79) BS03 MG ? GO:0005216 ... F2UB89 N/A
    815342 8srh:B (3.79) BS04 APR ? GO:0005216 ... F2UB89 N/A
    815343 8srh:B (3.79) BS05 CLR ? GO:0005216 ... F2UB89 N/A
    815344 8srh:B (3.79) BS06 CLR ? GO:0005216 ... F2UB89 N/A
    815345 8srh:C (3.79) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    815346 8srh:C (3.79) BS02 APR ? GO:0005216 ... F2UB89 N/A
    815347 8srh:C (3.79) BS03 MG ? GO:0005216 ... F2UB89 N/A
    815348 8srh:C (3.79) BS04 APR ? GO:0005216 ... F2UB89 N/A
    815349 8srh:C (3.79) BS05 CLR ? GO:0005216 ... F2UB89 N/A
    815350 8srh:C (3.79) BS06 CLR ? GO:0005216 ... F2UB89 N/A
    815351 8srh:D (3.79) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    815352 8srh:D (3.79) BS02 CLR ? GO:0005216 ... F2UB89 N/A
    815353 8srh:D (3.79) BS03 CLR ? GO:0005216 ... F2UB89 N/A
    815354 8srh:D (3.79) BS04 APR ? GO:0005216 ... F2UB89 N/A
    815355 8srh:D (3.79) BS05 MG ? GO:0005216 ... F2UB89 N/A
    815356 8srh:D (3.79) BS06 APR ? GO:0005216 ... F2UB89 N/A
    815357 8sri:A (2.73) BS01 APR ? GO:0005216 ... F2UB89 N/A
    815358 8sri:A (2.73) BS02 MG ? GO:0005216 ... F2UB89 N/A
    815359 8sri:A (2.73) BS03 MG ? GO:0005216 ... F2UB89 N/A
    815360 8sri:A (2.73) BS04 MG ? GO:0005216 ... F2UB89 N/A
    815361 8sri:A (2.73) BS05 APR ? GO:0005216 ... F2UB89 N/A
    815362 8sri:A (2.73) BS06 CLR ? GO:0005216 ... F2UB89 N/A
    815363 8sri:A (2.73) BS07 CLR ? GO:0005216 ... F2UB89 N/A
    815364 8sri:A (2.73) BS08 CLR ? GO:0005216 ... F2UB89 N/A
    815365 8sri:B (2.73) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    815366 8sri:B (2.73) BS02 APR ? GO:0005216 ... F2UB89 N/A
    815367 8sri:B (2.73) BS03 MG ? GO:0005216 ... F2UB89 N/A
    815368 8sri:B (2.73) BS04 MG ? GO:0005216 ... F2UB89 N/A
    815369 8sri:B (2.73) BS05 MG ? GO:0005216 ... F2UB89 N/A
    815370 8sri:B (2.73) BS06 APR ? GO:0005216 ... F2UB89 N/A
    815371 8sri:B (2.73) BS07 CLR ? GO:0005216 ... F2UB89 N/A
    815372 8sri:B (2.73) BS08 CLR ? GO:0005216 ... F2UB89 N/A
    815373 8sri:C (2.73) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    815374 8sri:C (2.73) BS02 APR ? GO:0005216 ... F2UB89 N/A
    815375 8sri:C (2.73) BS03 MG ? GO:0005216 ... F2UB89 N/A
    815376 8sri:C (2.73) BS04 MG ? GO:0005216 ... F2UB89 N/A
    815377 8sri:C (2.73) BS05 MG ? GO:0005216 ... F2UB89 N/A
    815378 8sri:C (2.73) BS06 APR ? GO:0005216 ... F2UB89 N/A
    815379 8sri:C (2.73) BS07 CLR ? GO:0005216 ... F2UB89 N/A
    815380 8sri:C (2.73) BS08 CLR ? GO:0005216 ... F2UB89 N/A
    815381 8sri:D (2.73) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    815382 8sri:D (2.73) BS02 CLR ? GO:0005216 ... F2UB89 N/A
    815383 8sri:D (2.73) BS03 CLR ? GO:0005216 ... F2UB89 N/A
    815384 8sri:D (2.73) BS04 APR ? GO:0005216 ... F2UB89 N/A
    815385 8sri:D (2.73) BS05 MG ? GO:0005216 ... F2UB89 N/A
    815386 8sri:D (2.73) BS06 MG ? GO:0005216 ... F2UB89 N/A
    815387 8sri:D (2.73) BS07 MG ? GO:0005216 ... F2UB89 N/A
    815388 8sri:D (2.73) BS08 APR ? GO:0005216 ... F2UB89 N/A
    815389 8srj:A (3.74) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    815390 8srj:A (3.74) BS02 CLR ? GO:0005216 ... F2UB89 N/A
    815391 8srj:A (3.74) BS03 CLR ? GO:0005216 ... F2UB89 N/A
    815392 8srj:B (3.74) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    815393 8srj:B (3.74) BS02 CLR ? GO:0005216 ... F2UB89 N/A
    815394 8srj:B (3.74) BS03 CLR ? GO:0005216 ... F2UB89 N/A
    815395 8srj:C (3.74) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    815396 8srj:C (3.74) BS02 CLR ? GO:0005216 ... F2UB89 N/A
    815397 8srj:C (3.74) BS03 CLR ? GO:0005216 ... F2UB89 N/A
    815398 8srj:D (3.74) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    815399 8srj:D (3.74) BS02 CLR ? GO:0005216 ... F2UB89 N/A
    815400 8srj:D (3.74) BS03 CLR ? GO:0005216 ... F2UB89 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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