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BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    19601 5mod:A (2.08) BS01 86L 2.7.11.1 GO:0004672 ... P68400 28495381 MOAD: Kd=300uM
    PDBbind: -logKd/Ki=3.52, Kd=300uM
    BindingDB: IC50=3000000nM
    19602 5moe:A (1.89) BS04 OQC 2.7.11.1 GO:0004672 ... P68400 28495381 MOAD: Kd=520uM
    PDBbind: -logKd/Ki=3.28, Kd=520uM
    19603 5moe:A (1.89) BS05 OQC 2.7.11.1 GO:0004672 ... P68400 28495381 MOAD: Kd=520uM
    PDBbind: -logKd/Ki=3.28, Kd=520uM
    19604 5moe:A (1.89) BS06 OQC 2.7.11.1 GO:0004672 ... P68400 28495381 MOAD: Kd=520uM
    PDBbind: -logKd/Ki=3.28, Kd=520uM
    19605 5mon:A (0.939) BS02 2AP 3.4.21.4 GO:0004175 ... P00760 28371253 MOAD: Kd=3.3mM
    PDBbind: -logKd/Ki=2.48, Kd=3.3mM
    19606 5moo:A (1.441) BS02 WOT 3.4.21.4 GO:0004175 ... P00760 28371253 MOAD: Kd=48.5mM
    PDBbind: -logKd/Ki=1.31, Kd=48.5mM
    19607 5mos:A (0.96) BS02 D86 3.4.21.4 GO:0004175 ... P00760 30177695 PDBbind: -logKd/Ki=3.79, Kd=163uM
    19608 5mpf:A (2.918) BS01 dna ? GO:0003700 ... Q9NZI5 29309642 PDBbind: Kd=90nM
    19609 5mpf:A (2.918) BS02 dna ? GO:0003700 ... Q9NZI5 29309642 PDBbind: Kd=90nM
    19610 5mpf:B (2.918) BS01 dna ? GO:0003700 ... Q9NZI5 29309642 PDBbind: Kd=90nM
    19611 5mpf:B (2.918) BS02 dna ? GO:0003700 ... Q9NZI5 29309642 PDBbind: Kd=90nM
    19612 5mpg:A (-1.00) BS01 rna ? GO:0003676 ... P09651 28650318 PDBbind: Kd=292nM
    19613 5mpk:A (1.9) BS01 0BC 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q92793 30258543 MOAD: Kd=0.003uM
    PDBbind: -logKd/Ki=8.52, Kd=0.003uM
    BindingDB: IC50=15nM, Kd=3.0nM
    19614 5mpl:A (-1.00) BS01 rna ? GO:0003676 ... P09651 28650318 PDBbind: Kd=541nM
    19615 5mpn:A (1.23) BS01 YE5 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q92793 30258543 MOAD: Kd=0.085uM
    PDBbind: -logKd/Ki=7.07, Kd=0.085uM
    BindingDB: Kd=85nM, IC50=59nM
    19616 5mpn:A (1.23) BS02 YE5 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q92793 30258543 MOAD: Kd=0.085uM
    PDBbind: -logKd/Ki=7.07, Kd=0.085uM
    BindingDB: Kd=85nM, IC50=59nM
    19617 5mpz:A (1.4) BS01 4I8 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q92793 28410781 MOAD: Kd=85uM
    PDBbind: -logKd/Ki=4.07, Kd=85uM
    BindingDB: IC50=455000nM, Kd=85000nM
    19618 5mqe:A (1.65) BS01 PKU 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q92793 28410781 MOAD: Kd=4uM
    PDBbind: -logKd/Ki=5.40, Kd=4uM
    BindingDB: Kd=4000nM, IC50=40000nM
    19619 5mql:A (3.25) BS02 G65 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 29127277 PDBbind: -logKd/Ki=5.85, Kd=1.4uM
    19620 5mqt:A (3.2) BS02 STI 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 29127277 PDBbind: -logKd/Ki=5.70, Kd=2uM
    19621 5mqv:A (2.154) BS01 D5Q 2.7.11.1
    2.7.11.26
    GO:0004672 ... P48730 28338621 MOAD: ic50=8nM
    PDBbind: -logKd/Ki=8.10, IC50=8nM
    19622 5mqx:A (-1.00) BS01 APR 2.1.1.-
    2.7.7.-
    2.7.7.19
    2.7.7.48
    3.1.3.84
    3.4.22.-
    3.6.1.15
    3.6.1.74
    3.6.4.13
    N/A P36328 30825649 PDBbind: -logKd/Ki=5.41, Kd=3.9uM
    19623 5mqy:A (1.13) BS01 GH4 3.4.22.15 GO:0006508 ... P07711 28287264 PDBbind: -logKd/Ki=7.11, Ki=0.077uM
    19624 5mra:B (3.74) BS02 DM2 ? GO:0005509 ... P30626 28726784 PDBbind: -logKd/Ki=8.00, Kd=10nM
    19625 5mrb:A (2.2) BS01 C5N 2.7.12.1 GO:0004672 ... P33981 28726638 MOAD: Kd=471nM
    PDBbind: -logKd/Ki=6.33, Kd=471nM
    19626 5mrd:A (1.41) BS01 S26 2.7.11.1 GO:0004672 ... O15530 28045490 MOAD: ic50=36.4uM
    PDBbind: -logKd/Ki=4.44, IC50=36.4uM
    19627 5mrh:A (2.5) BS01 Q9Z ? GO:0016020 ... Q99523 28462834 MOAD: ic50=0.0000631M
    PDBbind: -logKd/Ki=4.20, IC50=63uM
    BindingDB: IC50=63096nM
    19628 5mri:A (2.0) BS01 Q9Y ? GO:0016020 ... Q99523 28462834 PDBbind: -logKd/Ki=4.40, IC50=40uM
    19629 5mrm:A (1.8) BS01 Q9T 2.7.7.60 GO:0003824 ... P69834 28686408 MOAD: ic50=9.3uM
    PDBbind: -logKd/Ki=5.03, Kd=9.3uM
    19630 5mro:A (1.8) BS01 Q9P 2.7.7.60 GO:0003824 ... P69834 28686408 MOAD: ic50=2uM
    PDBbind: -logKd/Ki=5.70, Kd=2.0uM
    BindingDB: IC50=140nM
    19631 5mrp:A (1.9) BS01 6BC 2.7.7.60 GO:0003824 ... P69834 28686408 MOAD: ic50=3uM
    PDBbind: -logKd/Ki=5.52, Kd=3.0uM
    BindingDB: IC50=35nM
    19632 5msb:A (1.3) BS02 V13 4.2.1.1 GO:0004089 ... O43570 29503769 MOAD: Kd=35nM
    PDBbind: -logKd/Ki=7.46, Kd=35nM
    BindingDB: Kd=250nM
    19633 5mt0:A (1.29) BS01 QJS 3.4.21.46 GO:0004252 ... P00746 28157311 MOAD: Kd~500uM
    PDBbind: -logKd/Ki=3.30, Kd~500uM
    BindingDB: Ki=500000nM, Kd=500000nM
    19634 5mt4:A (1.65) BS01 M7O 3.4.21.46 GO:0004252 ... P00746 28157311 MOAD: Kd~500uM
    PDBbind: -logKd/Ki=3.30, Kd~500uM
    19635 5mte:A (1.4) BS01 BB2 ? GO:0018206 ... Q6VT21 29101077 PDBbind: -logKd/Ki=6.78, Ki=167nM
    19636 5mts:A (2.6) BS01 XKA ? GO:0007155 ... P08191 28257558 PDBbind: -logKd/Ki=7.15, IC50=70nM
    19637 5mtv:A (2.79) BS01 AGS ? GO:0005509 ... Q9EQP2 28228524 PDBbind: -logKd/Ki=4.11, Kd=77uM
    19638 5mtx:A (1.8) BS01 FJI 2.7.11.24 GO:0000077 ... Q16539 28834431 MOAD: Kd=17.7nM
    PDBbind: -logKd/Ki=7.75, Kd=17.7nM
    BindingDB: IC50=1.000000nM, Kd=3.1nM
    19639 5mty:A (2.31) BS01 HB9 2.7.11.24 GO:0000077 ... Q16539 28834431 MOAD: Kd=1.3nM
    PDBbind: -logKd/Ki=8.89, Kd=1.3nM
    BindingDB: IC50=0.600000nM, Kd=7.5nM
    19640 5muc:A (2.6) BS01 AH2 ? GO:0007155 ... P08191 29939458 PDBbind: -logKd/Ki=6.04, Kd=0.913uM
    19641 5mw2:A (2.35) BS01 U52 ? N/A P41182 28930682 MOAD: ic50<3nM
    PDBbind: -logKd/Ki=8.52, IC50<3nM
    19642 5mw4:A (2.19) BS01 5JU 2.1.1.360 GO:0031151 ... Q8TEK3 28337327 MOAD: Ki=0.002nM
    PDBbind: -logKd/Ki=11.70, Ki=0.002nM
    19643 5mw6:A (1.65) BS01 RC0 ? N/A P41182 28930682 MOAD: ic50=18648nM
    PDBbind: -logKd/Ki=4.73, IC50=18648nM
    19644 5mw6:A (1.65) BS02 RC0 ? N/A P41182 28930682 MOAD: ic50=18648nM
    PDBbind: -logKd/Ki=4.73, IC50=18648nM
    19645 5mw6:B (1.65) BS01 RC0 ? N/A P41182 28930682 PDBbind: -logKd/Ki=4.73, IC50=18648nM
    19646 5mw6:B (1.65) BS02 RC0 ? N/A P41182 28930682 PDBbind: -logKd/Ki=4.73, IC50=18648nM
    19647 5mwd:A (1.85) BS01 TJ3 ? N/A P41182 28930682 MOAD: ic50=632nM
    PDBbind: -logKd/Ki=5.72, IC50=1918nM
    19648 5mwg:A (1.5) BS01 WGX ? N/A P55201 29902720 MOAD: ic50=1.7uM
    PDBbind: -logKd/Ki=5.77, IC50=1.7uM
    BindingDB: IC50=1700nM
    19649 5mwh:A (1.65) BS01 UWX ? N/A P55201 29902720 MOAD: Kd=1.8uM
    PDBbind: -logKd/Ki=5.74, Kd=1.8uM
    BindingDB: Kd=2700nM, IC50=1900nM
    19650 5mwj:A (2.04) BS01 EBU ? GO:0005634 ... Q04724 28326635 MOAD: Kd=24.7nM
    PDBbind: -logKd/Ki=7.61, Kd=24.7nM
    19651 5mwo:A (1.962) BS01 J6W ? GO:0000976 ... P9WMC1 28513917 MOAD: ic50=0.19mM
    PDBbind: -logKd/Ki=3.21, IC50=610uM
    19652 5mwo:A (1.962) BS02 J6W ? GO:0000976 ... P9WMC1 28513917 MOAD: ic50=0.19mM
    PDBbind: -logKd/Ki=3.21, IC50=610uM
    19653 5mwp:A (1.82) BS02 ECV ? N/A P08235 29474466 MOAD: Ki=31.6nM
    PDBbind: -logKd/Ki=7.50, Ki=31.6nM
    BindingDB: IC50=<10000nM, Ki=40nM, EC50=13nM
    19654 5mwy:A (1.75) BS02 YNU ? N/A P08235 29474466 MOAD: Ki=100nM
    PDBbind: -logKd/Ki=7.00, Ki=100nM
    BindingDB: IC50=122nM, EC50=100nM, Ki=126nM
    19655 5mwz:A (1.25) BS01 KGU ? N/A P55201 29902720 MOAD: Kd=7.1uM
    PDBbind: -logKd/Ki=5.15, Kd=7.1uM
    19656 5mxf:A (1.9) BS01 MFU ? GO:0046872 ... C7BLE4 28806750 MOAD: Kd=0.26mM
    PDBbind: -logKd/Ki=3.59, Kd=0.26mM
    19657 5mxf:A (1.9) BS02 MFU ? GO:0046872 ... C7BLE4 28806750 MOAD: Kd=0.26mM
    PDBbind: -logKd/Ki=3.59, Kd=0.26mM
    19658 5mxk:A (1.932) BS01 ZHA ? GO:0000976 ... P9WMC1 28513917 MOAD: ic50=150uM
    PDBbind: -logKd/Ki=3.39, IC50=410uM
    19659 5mxq:A (2.0) BS03 U8K 3.5.2.6 GO:0016787 ... Q9K2N0 30427656 MOAD: ic50=1.9uM
    PDBbind: -logKd/Ki=5.72, IC50=1.9uM
    19660 5mxr:A (1.75) BS03 JTY 3.5.2.6 GO:0016787 ... Q9K2N0 30427656 MOAD: ic50=6.2uM
    PDBbind: -logKd/Ki=5.21, IC50=6.2uM
    19661 5mxr:A (1.75) BS04 JTY 3.5.2.6 GO:0016787 ... Q9K2N0 30427656 MOAD: ic50=6.2uM
    PDBbind: -logKd/Ki=5.21, IC50=6.2uM
    19662 5mxv:A (1.626) BS01 K3T ? GO:0000976 ... P9WMC1 29018348 MOAD: ic50=12uM
    PDBbind: -logKd/Ki=4.92, IC50=12uM
    19663 5mxx:A (1.75) BS01 W4A 2.7.11.1 GO:0004672 ... Q96SB4 28135068 MOAD: ic50=31nM
    PDBbind: -logKd/Ki=7.51, IC50=31nM
    BindingDB: IC50=31nM
    19664 5my8:A (1.7) BS01 RXZ 2.7.11.1 GO:0004672 ... Q96SB4 28135068 MOAD: Kd=72nM
    PDBbind: -logKd/Ki=7.14, Kd=72nM
    BindingDB: IC50=3.18nM
    19665 5myd:A (2.3) BS01 DUP 3.6.1.23 GO:0004170 ... A0A2D0TC86 28892519 MOAD: ic50=13.9uM
    PDBbind: -logKd/Ki=4.86, IC50=13.9uM
    19666 5myg:A (2.3) BS01 LS8 ? N/A P55201 28714688 MOAD: Kd=31nM
    PDBbind: -logKd/Ki=7.51, Kd=31nM
    BindingDB: Kd=31nM, IC50=47nM
    19667 5myl:A (1.724) BS01 Q2N ? GO:0000976 ... P9WMC1 29018348 MOAD: ic50=9.9uM
    PDBbind: -logKd/Ki=5.00, IC50=9.9uM
    19668 5mym:B (2.28) BS01 HYV ? GO:0000976 ... P9WMC1 29018348 MOAD: ic50=3.9uM
    PDBbind: -logKd/Ki=5.41, IC50=3.9uM
    19669 5myn:A (1.564) BS01 ZUF ? GO:0000976 ... P9WMC1 29018348 MOAD: ic50=30uM
    PDBbind: -logKd/Ki=4.52, IC50=30uM
    19670 5myr:A (1.828) BS01 UDY ? GO:0000976 ... P9WMC1 29018348 MOAD: ic50=22uM
    PDBbind: -logKd/Ki=4.66, IC50=22uM
    19671 5mys:A (1.587) BS01 YP6 ? GO:0000976 ... P9WMC1 29018348 MOAD: ic50=50uM
    PDBbind: -logKd/Ki=4.30, IC50=50uM
    19672 5myv:A (2.9) BS01 W4A 2.7.11.1 GO:0004672 ... P78362 28135068 PDBbind: -logKd/Ki=7.51, IC50=31nM
    19673 5mz3:A (2.15) BS01 8EN 2.7.11.24 GO:0000077 ... Q16539 29107542 MOAD: ic50=0.0002uM
    PDBbind: -logKd/Ki=6.66, IC50=0.22uM
    BindingDB: IC50=220nM
    19674 5mzg:A (1.85) BS01 2GE 3.6.1.-
    3.6.1.56
    GO:0001669 ... P53368 29281266 MOAD: ic50=138nM
    PDBbind: -logKd/Ki=6.86, IC50=138nM
    19675 5n0d:A (1.7) BS02 8F2 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 28453941 MOAD: Ki=3.3nM
    PDBbind: -logKd/Ki=8.48, Ki=3.3nM
    BindingDB: Ki=3.3nM
    19676 5n0e:A (1.75) BS02 8F3 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 28453941 MOAD: Ki=3.6nM
    PDBbind: -logKd/Ki=8.44, Ki=3.6nM
    BindingDB: Ki=3.6nM
    19677 5n0f:A (1.69) BS01 7K2 ? GO:0005975 ... Q9Z4P9 28766587 MOAD: Kd=0.9uM
    PDBbind: -logKd/Ki=6.05, Kd=0.90uM
    19678 5n16:A (1.76) BS01 8FN ? N/A Q5A4W8 28516956 MOAD: Kd=5uM
    PDBbind: -logKd/Ki=5.30, Kd=5uM
    19679 5n16:A (1.76) BS02 8FN ? N/A Q5A4W8 28516956 MOAD: Kd=5uM
    PDBbind: -logKd/Ki=5.30, Kd=5uM
    19680 5n17:A (1.6) BS01 8FK ? N/A Q5A4W8 28516956 MOAD: Kd=4.8uM
    PDBbind: -logKd/Ki=5.32, Kd=4.8uM
    19681 5n18:A (1.45) BS01 8HZ ? N/A Q5A4W8 28516956 MOAD: Kd=2.1uM
    PDBbind: -logKd/Ki=5.68, Kd=2.1uM
    19682 5n1p:A (1.448) BS01 8GK 3.5.1.104 GO:0005975 ... Q81EJ6 29257674 MOAD: Kd=25uM
    PDBbind: -logKd/Ki=4.60, Kd=25uM
    19683 5n1r:A (1.3) BS02 8GH 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A PDBbind: -logKd/Ki=7.95, Ki=11.1nM
    BindingDB: Ki=11nM
    19684 5n1s:A (1.3) BS02 8GE 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A PDBbind: -logKd/Ki=7.99, Ki=10.2nM
    BindingDB: Ki=10nM
    19685 5n1v:A (2.52) BS01 8GQ 2.7.11.1 GO:0004672 ... P68400 28485934 PDBbind: -logKd/Ki=6.19, IC50=0.64uM
    19686 5n1x:B (1.72) BS01 8HH ? N/A P41182 28485934 MOAD: Kd=689uM
    PDBbind: -logKd/Ki=3.16, Kd=689uM
    19687 5n1x:B (1.72) BS02 8HH ? N/A P41182 28485934 MOAD: Kd=689uM
    PDBbind: -logKd/Ki=3.16, Kd=689uM
    19688 5n1z:A (1.81) BS01 8GQ ? N/A P41182 28485934 MOAD: Kd=0.0065uM
    PDBbind: -logKd/Ki=8.19, Kd=0.0065uM
    BindingDB: IC50=1995nM
    19689 5n20:A (1.38) BS01 8GN ? N/A P41182 28485934 MOAD: ic50=61uM
    PDBbind: -logKd/Ki=4.21, IC50=61uM
    19690 5n21:A (1.58) BS01 8HN ? N/A P41182 28485934 MOAD: Kd=1.1uM
    PDBbind: -logKd/Ki=5.96, Kd=1.1uM
    BindingDB: Kd=1100nM
    19691 5n21:A (1.58) BS02 8HN ? N/A P41182 28485934 MOAD: Kd=1.1uM
    PDBbind: -logKd/Ki=5.96, Kd=1.1uM
    BindingDB: Kd=1100nM
    19692 5n24:A (1.5) BS02 8HE 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A PDBbind: -logKd/Ki=8.92, Ki=1.2nM
    BindingDB: Ki=1.2nM
    19693 5n24:A (1.5) BS03 8HE 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A PDBbind: -logKd/Ki=8.92, Ki=1.2nM
    BindingDB: Ki=1.2nM
    19694 5n25:A (1.4) BS02 8HK 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A PDBbind: -logKd/Ki=7.78, Ki=16.6nM
    BindingDB: Ki=17nM
    19695 5n25:A (1.4) BS03 8HK 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A PDBbind: -logKd/Ki=7.78, Ki=16.6nM
    BindingDB: Ki=17nM
    19696 5n2d:A (2.35) BS01 8J8 ? N/A Q9NZQ7 28613862 PDBbind: -logKd/Ki=8.22, IC50~6nM
    BindingDB: Kd=<1000nM, IC50=6.0nM
    19697 5n2d:B (2.35) BS01 8J8 ? N/A Q9NZQ7 28613862 MOAD: ic50~50uM
    PDBbind: -logKd/Ki=8.22, IC50~6nM
    BindingDB: Kd=<1000nM, IC50=6.0nM
    19698 5n2f:A (1.7) BS01 8HW ? N/A Q9NZQ7 28613862 PDBbind: -logKd/Ki=7.10, IC50=80nM
    19699 5n2f:B (1.7) BS01 8HW ? N/A Q9NZQ7 28613862 MOAD: ic50=80nM
    PDBbind: -logKd/Ki=7.10, IC50=80nM
    19700 5n2t:E (1.379) BS06 8KK 3.4.24.27 GO:0004222 ... P00800 28590130 PDBbind: -logKd/Ki=5.08, Kd=8.40uM
    19701 5n2x:E (1.209) BS06 8KN 3.4.24.27 GO:0004222 ... P00800 28590130 PDBbind: -logKd/Ki=6.06, Kd=0.87uM
    19702 5n2z:E (1.37) BS06 8JH 3.4.24.27 GO:0004222 ... P00800 28590130 PDBbind: -logKd/Ki=5.31, Kd=4.9uM
    19703 5n31:E (1.368) BS06 8LB 3.4.24.27 GO:0004222 ... P00800 28590130 PDBbind: -logKd/Ki=5.79, Kd=1.61uM
    19704 5n34:E (1.22) BS06 8JQ 3.4.24.27 GO:0004222 ... P00800 28590130 PDBbind: -logKd/Ki=4.63, Kd=23.27uM
    19705 5n3v:E (1.12) BS06 8L5 3.4.24.27 GO:0004222 ... P00800 28590130 PDBbind: -logKd/Ki=4.34, Kd=45.24uM
    19706 5n3w:A (2.3) BS02 8KW 3.3.2.6
    3.4.11.4
    GO:0003723 ... P09960 28303931 MOAD: ic50=0.5uM
    PDBbind: -logKd/Ki=6.30, IC50=0.50uM
    19707 5n3y:E (1.339) BS06 8L2 3.4.24.27 GO:0004222 ... P00800 28590130 PDBbind: -logKd/Ki=5.03, Kd=9.32uM
    19708 5n49:B (1.94) BS01 8LW ? N/A O95696 28402630 MOAD: ic50=450nM
    PDBbind: -logKd/Ki=6.33, IC50=470nM
    19709 5n4s:A (1.2) BS03 R38 3.5.2.6 GO:0016787 ... Q9K2N0 28470248 MOAD: ic50=0.055uM
    PDBbind: -logKd/Ki=7.26, IC50=0.055uM
    19710 5n4s:A (1.2) BS04 R38 3.5.2.6 GO:0016787 ... Q9K2N0 28470248 MOAD: ic50=0.055uM
    PDBbind: -logKd/Ki=7.26, IC50=0.055uM
    19711 5n4t:A (1.16) BS03 R59 3.5.2.6 GO:0016787 ... Q9K2N0 28470248 MOAD: ic50=1.06uM
    PDBbind: -logKd/Ki=5.97, IC50=1.06uM
    19712 5n53:B (1.48) BS01 8NB 1.1.1.37
    1.1.1.399
    1.1.1.95
    GO:0051287 ... O43175 29568346 MOAD: Kd=2.8mM
    PDBbind: -logKd/Ki=2.55, Kd=2.8mM
    BindingDB: Kd=2800000nM
    19713 5n55:A (1.99) BS02 8NN 3.5.2.6 N/A Q8GKX2 28470248 MOAD: Kd=1.03uM
    PDBbind: -logKd/Ki=5.99, Kd=1.03uM
    19714 5n55:A (1.99) BS03 8NN 3.5.2.6 N/A Q8GKX2 28470248 MOAD: Kd=1.03uM
    PDBbind: -logKd/Ki=5.99, Kd=1.03uM
    19715 5n58:A (1.957) BS02 93W 3.5.2.6 N/A Q8GKX2 28470248 MOAD: Kd=0.8uM
    PDBbind: -logKd/Ki=6.10, Kd=0.8uM
    19716 5n69:A (2.45) BS03 2OW ? GO:0003774 ... Q9BE39 28775348 MOAD: Kd=0.29uM
    PDBbind: -logKd/Ki=6.54, Kd=0.29uM
    19717 5n6s:A (2.1) BS01 8P5 3.2.1.21 GO:0004553 ... Q08638 28463498 PDBbind: -logKd/Ki=8.09, Ki=8.2nM
    19718 5n7v:A (2.52) BS01 8PT 2.7.12.1 GO:0004672 ... P33981 28539250 PDBbind: -logKd/Ki=8.77, Kd=1.7nM
    BindingDB: IC50=1.8nM
    19719 5n84:A (2.3) BS01 8Q5 2.7.12.1 GO:0004672 ... P33981 28539250 MOAD: Kd=11nM
    PDBbind: -logKd/Ki=7.96, Kd=11nM
    BindingDB: IC50=10.0nM
    19720 5n87:A (2.29) BS01 N66 2.7.12.1 GO:0004672 ... P33981 28539250 MOAD: Kd=0.56nM
    PDBbind: -logKd/Ki=9.25, Kd=0.56nM
    19721 5n8v:A (1.55) BS01 KZZ ? GO:0005778 ... Q8IEW2 28360328 MOAD: Ki=0.207uM
    PDBbind: -logKd/Ki=6.68, Ki=0.207uM
    19722 5n93:A (2.1) BS01 8QE 2.7.12.1 GO:0004672 ... P33981 28539250 MOAD: Kd=2.2nM
    PDBbind: -logKd/Ki=8.66, Kd=2.2nM
    BindingDB: IC50=6.4nM
    19723 5n9k:A (1.643) BS01 8QK 2.7.11.1 GO:0004672 ... P68400 29462988 MOAD: Ki=0.46nM
    PDBbind: -logKd/Ki=9.34, Ki=0.46nM
    19724 5n9l:A (1.79) BS01 8QH 2.7.11.1 GO:0004672 ... P68400 29462988 MOAD: Ki=15nM
    PDBbind: -logKd/Ki=7.82, Ki=15nM
    BindingDB: IC50=30nM
    19725 5n9r:A (2.23) BS01 8RN 3.4.19.12 GO:0004843 ... Q93009 29200206 MOAD: Kd=2.6uM
    PDBbind: -logKd/Ki=5.59, Kd=2.6uM
    BindingDB: IC50=300nM
    19726 5n9s:A (2.3) BS01 8QW 2.7.12.1 GO:0004672 ... P33981 28539250 MOAD: Kd=2.4nM
    PDBbind: -logKd/Ki=8.62, Kd=2.4nM
    BindingDB: IC50=<1.000nM
    19727 5n9t:A (1.73) BS01 8QQ 3.4.19.12 GO:0004843 ... Q93009 29200206 MOAD: ic50=22nM
    PDBbind: -logKd/Ki=6.66, IC50=220nM
    BindingDB: IC50=22nM
    19728 5na0:A (2.9) BS01 8QZ 2.7.12.1 GO:0004672 ... P33981 28539250 PDBbind: -logKd/Ki=9.77, Kd=0.17nM
    19729 5nad:A (2.8) BS01 8RH 2.7.12.1 GO:0004672 ... P33981 28539250 PDBbind: -logKd/Ki=8.96, Kd=1.1nM
    BindingDB: IC50=1.000000nM
    19730 5nai:A (1.15) BS03 93W 3.5.2.6 N/A Q8GKX2 28470248 PDBbind: -logKd/Ki=6.10, Kd=0.8uM
    19731 5nap:A (2.17) BS01 DZ7 3.1.1.7 GO:0001507 ... P04058 29651884 MOAD: Ki=11.12nM
    PDBbind: -logKd/Ki=7.95, Kd=11.12nM
    19732 5nar:A (1.55) BS01 8RW 3.4.21.46 GO:0004252 ... P00746 28621538 MOAD: ic50=0.5uM
    PDBbind: -logKd/Ki=6.30, IC50=0.50uM
    BindingDB: IC50=500nM
    19733 5nau:A (2.25) BS01 DZ0 3.1.1.7 GO:0001507 ... P04058 29651884 MOAD: Ki=29.86nM
    PDBbind: -logKd/Ki=7.52, Kd=29.86nM
    19734 5naw:A (1.25) BS01 8RZ 3.4.21.46 GO:0004252 ... P00746 28621538 MOAD: ic50=0.05uM
    PDBbind: -logKd/Ki=7.30, IC50=0.05uM
    BindingDB: IC50=50nM
    19735 5nb6:A (1.75) BS01 8S2 3.4.21.46 GO:0004252 ... P00746 28621538 MOAD: ic50=0.5uM
    PDBbind: -logKd/Ki=6.30, IC50=0.50uM
    BindingDB: IC50=667nM
    19736 5nb7:A (1.33) BS01 8NQ 3.4.21.46 GO:0004252 ... P00746 28621538 MOAD: ic50=0.006uM
    PDBbind: -logKd/Ki=8.22, IC50=0.006uM
    BindingDB: IC50=9nM
    19737 5nba:A (1.87) BS01 8S5 3.4.21.46 GO:0004252 ... P00746 28621538 MOAD: ic50=0.05uM
    PDBbind: -logKd/Ki=7.30, IC50=0.05uM
    BindingDB: IC50=50nM
    19738 5nbw:H (2.4) BS01 8SK N/A N/A N/A 28603847 PDBbind: -logKd/Ki=8.59, Kd=2.6nM
    19739 5nbw:L (2.4) BS01 8SK N/A N/A N/A 28603847 PDBbind: -logKd/Ki=8.59, Kd=2.6nM
    19740 5ncq:A (3.0) BS02 8T8 7.2.2.10 GO:0000166 ... P04191 29293507 PDBbind: -logKd/Ki=6.96, IC50=0.11uM
    19741 5ncy:A (1.9) BS01 8TK 2.7.1.137
    2.7.1.153
    GO:0016301 ... O35904 28520415 MOAD: ic50=0.4nM
    PDBbind: -logKd/Ki=9.40, IC50=0.4nM
    19742 5ncz:A (1.94) BS01 8TN 2.7.1.137
    2.7.1.153
    GO:0001782 ... O35904 28520415 MOAD: ic50=0.79nM
    PDBbind: -logKd/Ki=9.10, IC50=0.8nM
    19743 5ndb:A (2.38) BS04 8TW 3.5.2.6 GO:0008270 ... Q8G9Q0 29250863 PDBbind: -logKd/Ki=4.66, Kd=22uM
    19744 5ndd:A (2.801) BS01 8TZ 3.2.1.17 GO:0003796 ... P00720
    P0ABE7
    P55085
    28445455 PDBbind: -logKd/Ki=6.46, Kd=344nM
    19745 5ndf:A (2.3) BS03 LU2 2.4.1.41 GO:0000139 ... Q10471 29061849 MOAD: Ki=1.4uM
    PDBbind: -logKd/Ki=5.85, Ki=1.4uM
    19746 5ne1:B (2.09) BS01 OK3 3.5.2.6 GO:0008800 ... Q9RBQ1 28876489 PDBbind: -logKd/Ki=8.28, IC50=5.25nM
    19747 5ne3:A (1.35) BS01 NXL 3.5.2.6 GO:0008800 ... B2FRP5 28876489 PDBbind: -logKd/Ki=7.84, IC50=14.36nM
    19748 5ne5:A (1.05) BS01 KIF 3.2.1.113 GO:0004559 ... B0SWV2 28493500 MOAD: Kd=39nM
    PDBbind: -logKd/Ki=7.41, Kd=39nM
    19749 5nea:A (1.3) BS02 8V8 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 28728897 MOAD: Ki=0.05nM
    PDBbind: -logKd/Ki=10.30, Ki=0.05nM
    BindingDB: Ki=0.050000nM
    19750 5nea:A (1.3) BS03 8V8 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 28728897 MOAD: Ki=0.05nM
    PDBbind: -logKd/Ki=10.30, Ki=0.05nM
    BindingDB: Ki=0.050000nM
    19751 5neb:A (2.05) BS01 8VE ? GO:0015276 ... P22756 28691798 MOAD: Ki=17nM
    PDBbind: -logKd/Ki=7.77, Ki=17nM
    19752 5nee:A (1.7) BS02 8V5 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 28728897 MOAD: Ki=0.02nM
    PDBbind: -logKd/Ki=10.70, Ki=0.02nM
    BindingDB: Ki=0.020000nM
    19753 5nev:A (2.97) BS01 72L 2.7.11.22 GO:0000082 ... P24941 28005359 PDBbind: -logKd/Ki=7.36, IC50=0.044uM
    19754 5nf5:B (2.85) BS01 8VN ? GO:0015276 ... P22756 28691798 PDBbind: -logKd/Ki=6.82, Ki=152nM
    19755 5nf6:A (2.55) BS03 8VN ? GO:0015276 ... P42264 28691798 PDBbind: -logKd/Ki=7.46, Ki=35nM
    19756 5nf9:A (1.87) BS01 8VW ? GO:0030246 ... P17931 28554839 MOAD: Kd=4.7uM
    PDBbind: -logKd/Ki=5.33, Kd=4.7uM
    19757 5nfb:A (1.59) BS01 8VT ? GO:0030246 ... P17931 28554839 MOAD: Kd=0.77uM
    PDBbind: -logKd/Ki=6.11, Kd=0.77uM
    19758 5ng9:A (1.15) BS01 8VN ? GO:0015276 ... P19491 28691798 MOAD: Ki=191nM
    PDBbind: -logKd/Ki=6.72, Ki=191nM
    19759 5ngb:A (2.9) BS01 8WH 2.7.1.137
    2.7.1.153
    GO:0016301 ... O35904 28857471 PDBbind: -logKd/Ki=7.72, IC50=0.019uM
    19760 5nge:A (2.35) BS01 8WK 3.4.19.12 GO:0004843 ... Q93009 29045389 MOAD: Kd=65nM
    PDBbind: -logKd/Ki=7.19, Kd=65nM
    19761 5ngf:A (2.33) BS01 8WN 3.4.19.12 GO:0004843 ... Q93009 29045389 PDBbind: -logKd/Ki=5.11, Kd=7.8uM
    19762 5ngr:A (2.2) BS01 8WT 3.6.1.-
    3.6.1.56
    GO:0001669 ... P36639 28929756 MOAD: ic50=24uM
    PDBbind: -logKd/Ki=4.62, IC50=24uM
    19763 5ngs:A (1.85) BS01 8WW 3.6.1.-
    3.6.1.56
    GO:0001669 ... P36639 28929756 MOAD: ic50=170nM
    PDBbind: -logKd/Ki=6.77, IC50=0.17uM
    19764 5ngt:A (1.54) BS01 8WZ 3.6.1.-
    3.6.1.56
    GO:0001669 ... P36639 28929756 PDBbind: -logKd/Ki=5.89, IC50=1.3uM
    19765 5ngu:A (2.74) BS01 8X2 2.7.11.24 GO:0000165 ... P28482 28376306 PDBbind: -logKd/Ki=7.44, IC50=0.036uM
    BindingDB: IC50=36nM
    19766 5ngz:A (2.4) BS01 2BG 2.3.2.23 GO:0000209 ... Q9NPD8 28437106 MOAD: Kd=1.3mM
    PDBbind: -logKd/Ki=2.89, Kd=1.3mM
    BindingDB: Kd=1300000nM
    19767 5nhf:A (2.14) BS01 8X5 2.7.11.24 GO:0000165 ... P28482 28376306 MOAD: ic50<0.00032uM
    PDBbind: -logKd/Ki=9.49, IC50<0.32nM
    BindingDB: IC50=80nM
    19768 5nhh:A (1.94) BS01 8XH 2.7.11.24 GO:0000165 ... P28482 28376306 MOAD: ic50<0.00113uM
    PDBbind: -logKd/Ki=8.95, IC50<1.13nM
    BindingDB: IC50=4.8nM
    19769 5nhj:A (2.12) BS01 8XE 2.7.11.24 GO:0000165 ... P28482 28376306 MOAD: ic50=0.00539uM
    PDBbind: -logKd/Ki=8.27, IC50=0.0054uM
    BindingDB: IC50=1600nM
    19770 5nhl:A (2.07) BS01 8XB 2.7.11.24 GO:0000165 ... P28482 28376306 MOAD: ic50<0.0003uM
    PDBbind: -logKd/Ki=9.52, IC50<0.3nM
    BindingDB: IC50=<0.300000nM
    19771 5nho:A (2.24) BS01 8XN 2.7.11.24 GO:0000165 ... P28482 28376306 MOAD: ic50<0.0003uM
    PDBbind: -logKd/Ki=9.52, IC50<0.3nM
    BindingDB: IC50=<0.300000nM
    19772 5nhp:A (1.99) BS01 8XK 2.7.11.24 GO:0000165 ... P28482 28376306 MOAD: ic50=0.023uM
    PDBbind: -logKd/Ki=7.64, IC50=0.023uM
    BindingDB: IC50=>10000nM
    19773 5nhv:A (2.0) BS01 8QB 2.7.11.24 GO:0000165 ... P28482 28376306 MOAD: ic50=0.0028uM
    PDBbind: -logKd/Ki=8.55, IC50=0.0028uM
    BindingDB: IC50=2.8nM
    19774 5nhy:A (1.72) BS01 8XT 3.6.1.-
    3.6.1.56
    GO:0001669 ... P36639 28679043 MOAD: ic50=2.3nM
    PDBbind: -logKd/Ki=8.64, IC50=2.3nM
    BindingDB: IC50=2.3nM
    19775 5nhz:A (1.85) BS03 8XZ 3.5.2.6 N/A Q9K2N0 28445786 MOAD: ic50=4.7uM
    PDBbind: -logKd/Ki=5.33, IC50=4.7uM
    BindingDB: IC50=4700nM
    19776 5ni0:A (1.673) BS03 8XW 3.5.2.6 N/A Q9K2N0 28445786 MOAD: ic50=1.8uM
    PDBbind: -logKd/Ki=5.74, IC50=1.8uM
    BindingDB: IC50=1800nM
    19777 5ni5:A (2.3) BS02 8YB ? GO:0003677 ... P51449 30095900 MOAD: ic50=0.009uM
    PDBbind: -logKd/Ki=8.05, IC50=0.009uM
    BindingDB: IC50=10.0nM, EC50=8.0nM, Ki=40nM
    19778 5ni7:A (2.45) BS02 8Y8 ? GO:0003677 ... P51449 30095900 MOAD: ic50=0.02uM
    PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    BindingDB: IC50=20nM
    19779 5ni8:A (1.94) BS02 8Y2 ? GO:0003677 ... P51449 30095900 MOAD: ic50=0.02uM
    PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    BindingDB: IC50=20nM
    19780 5nib:A (1.82) BS02 8Y5 ? GO:0003677 ... P51449 30095900 MOAD: ic50=0.019uM
    PDBbind: -logKd/Ki=7.72, IC50=0.019uM
    BindingDB: IC50=19nM
    19781 5nih:A (1.3) BS01 8VE ? GO:0015276 ... P19491 28691798 MOAD: Ki=134nM
    PDBbind: -logKd/Ki=6.87, Ki=134nM
    19782 5niy:A (1.7) BS01 GNP 3.6.5.4 GO:0005525 ... P10121 30146170 PDBbind: -logKd/Ki=4.22, Kd=60uM
    19783 5nj8:A (3.3) BS01 dna ? GO:0006355 ... P35869 28602820 PDBbind: Kd=90nM
    19784 5nj8:A (3.3) BS02 dna ? GO:0006355 ... P35869 28602820 PDBbind: Kd=90nM
    19785 5nj8:B (3.3) BS01 dna ? GO:0003700 ... P27540 28602820 PDBbind: Kd=90nM
    19786 5nj8:B (3.3) BS02 dna ? GO:0003700 ... P27540 28602820 PDBbind: Kd=90nM
    19787 5nj8:C (3.3) BS01 dna ? GO:0006355 ... P35869 28602820 PDBbind: Kd=90nM
    19788 5nj8:C (3.3) BS02 dna ? GO:0006355 ... P35869 28602820 PDBbind: Kd=90nM
    19789 5nj8:D (3.3) BS01 dna ? GO:0003700 ... P27540 28602820 PDBbind: Kd=90nM
    19790 5nj8:D (3.3) BS02 dna ? GO:0003700 ... P27540 28602820 PDBbind: Kd=90nM
    19791 5njz:A (1.768) BS01 8ZH 2.7.10.1 GO:0004672 ... P29317 28544567 MOAD: Kd=16.6nM
    PDBbind: -logKd/Ki=7.80, Kd=16nM
    19792 5nk2:A (1.649) BS01 8ZZ 2.7.10.1 GO:0004672 ... P29317 28544567 MOAD: Kd=0.182uM
    PDBbind: -logKd/Ki=6.74, Kd=182nM
    19793 5nk3:A (1.586) BS01 92Q 2.7.10.1 GO:0004672 ... P29317 28544567 MOAD: Kd=38.02nM
    PDBbind: -logKd/Ki=7.42, Kd=38nM
    19794 5nk4:A (1.45) BS01 90E 2.7.10.1 GO:0004672 ... P29317 28544567 MOAD: Kd=1.995nM
    PDBbind: -logKd/Ki=8.70, Kd=2.0nM
    19795 5nk6:A (1.267) BS01 90W 2.7.10.1 GO:0004672 ... P29317 28544567 MOAD: Kd=0.158uM
    PDBbind: -logKd/Ki=6.80, Kd=158nM
    19796 5nk7:A (1.889) BS01 8ZZ 2.7.10.1 GO:0004672 ... P29317 28544567 MOAD: Kd=0.468nM
    PDBbind: -logKd/Ki=6.33, Kd=468nM
    19797 5nk8:A (1.761) BS01 90Z 2.7.10.1 GO:0004672 ... P29317 28544567 MOAD: Kd=0.229uM
    PDBbind: -logKd/Ki=6.64, Kd=229nM
    19798 5nk9:A (1.588) BS01 912 2.7.10.1 GO:0004672 ... P29317 28544567 MOAD: Kd=0.724uM
    PDBbind: -logKd/Ki=6.14, Kd=724nM
    19799 5nka:A (1.377) BS01 91H 2.7.10.1 GO:0004672 ... P29317 28544567 MOAD: Kd=3.47uM
    PDBbind: -logKd/Ki=5.46, Kd=3.5uM
    19800 5nkb:A (1.5) BS01 8ZT 2.7.10.1 GO:0004672 ... P29317 28544567 MOAD: Kd=0.759nM
    PDBbind: -logKd/Ki=9.12, Kd=0.76nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218