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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    19001 5jlw:D (2.088) BS02 dna ? GO:0000981 ... P02833 27271797 PDBbind: Kd=3nM
    19002 5jlx:A (2.748) BS01 dna ? GO:0000981 ... P02833 27271797 PDBbind: Kd=7.3nM
    19003 5jlx:A (2.748) BS02 dna ? GO:0000981 ... P02833 27271797 PDBbind: Kd=7.3nM
    19004 5jlx:D (2.748) BS01 dna ? GO:0000981 ... P02833 27271797 PDBbind: Kd=7.3nM
    19005 5jlx:D (2.748) BS02 dna ? GO:0000981 ... P02833 27271797 PDBbind: Kd=7.3nM
    19006 5jmp:A (1.7) BS01 LC7 1.1.1.267 GO:0008299 ... Q8IKG4 27487410 MOAD: ic50=0.067uM
    PDBbind: -logKd/Ki=7.17, IC50=0.067uM
    19007 5jmw:A (1.55) BS01 L50 1.1.1.267 GO:0008299 ... Q8IKG4 27487410 MOAD: ic50=0.175uM
    PDBbind: -logKd/Ki=6.76, IC50=0.175uM
    19008 5jmx:A (1.44) BS03 DZ5 3.5.2.6 GO:0008270 ... P04190 29655609 PDBbind: -logKd/Ki=5.09, IC50=8.2uM
    BindingDB: IC50=8200nM
    19009 5jn8:A (1.85) BS01 AZM 4.2.1.1 GO:0004089 ... P22748 28975383 PDBbind: -logKd/Ki=7.30, Kd=50nM
    BindingDB: Ki=74nM, Kd=100nM, IC50=17.5nM
    19010 5jn9:A (2.1) BS02 EZL 4.2.1.1 GO:0004089 ... P22748 28975383 PDBbind: -logKd/Ki=7.79, Kd=16.2nM
    BindingDB: Ki=93nM
    19011 5jna:A (2.0) BS02 TOR 4.2.1.1 GO:0004089 ... P22748 28975383 PDBbind: -logKd/Ki=7.35, Kd=45nM
    BindingDB: Ki=4900nM
    19012 5jnl:A (1.6) BS01 L54 1.1.1.267 GO:0008299 ... Q8IKG4 27487410 MOAD: ic50=0.27uM
    PDBbind: -logKd/Ki=6.57, IC50=0.27uM
    19013 5jnn:A (2.3) BS01 6LM ? GO:0004864 ... O80992 27518563 MOAD: ic50=4504nM
    PDBbind: -logKd/Ki=5.35, IC50=4504nM
    19014 5jo0:A (1.8) BS01 L56 1.1.1.267 GO:0008299 ... Q8IKG4 27487410 MOAD: ic50=0.05uM
    PDBbind: -logKd/Ki=7.30, IC50=0.05uM
    19015 5jog:A (2.46) BS02 6LT 3.4.-.- GO:0008233 ... Q92905 27774986 MOAD: ic50=0.0058uM
    PDBbind: -logKd/Ki=8.24, IC50=0.0058uM
    BindingDB: IC50=5.8nM
    19016 5joh:A (1.99) BS02 6M3 3.4.-.- GO:0008233 ... Q92905 27774986 MOAD: ic50=1.1uM
    PDBbind: -logKd/Ki=5.96, IC50=1.1uM
    19017 5jox:A (1.8) BS01 EDG 3.2.1.55 GO:0000272 ... A7LXT8 27466444 MOAD: Kd=35uM
    PDBbind: -logKd/Ki=4.46, Kd=35uM
    19018 5jpt:A (2.935) BS01 CDP 3.6.4.13 GO:0000390 ... P53131 28180308 PDBbind: -logKd/Ki=4.60, Kd>25uM
    19019 5jq5:A (1.94) BS01 I74 2.7.11.22 GO:0000082 ... P24941 28125165 MOAD: Kd=2341nM
    PDBbind: -logKd/Ki=5.63, Kd=2341nM
    BindingDB: IC50=620nM
    19020 5jq7:A (2.69) BS01 T0R ? N/A Q05320 27362232 PDBbind: -logKd/Ki=4.80, Kd=16uM
    BindingDB: EC50=63nM, Kd=16000nM
    19021 5jq7:B (2.69) BS01 T0R ? N/A Q05320 27362232 PDBbind: -logKd/Ki=4.80, Kd=16uM
    BindingDB: EC50=63nM, Kd=16000nM
    19022 5jq8:A (1.94) BS01 I73 2.7.11.22 GO:0000082 ... P24941 28125165 PDBbind: -logKd/Ki=5.70, Kd>2000nM
    BindingDB: IC50=580nM
    19023 5jq9:A (2.101) BS01 6MB 2.5.1.15 GO:0004156 ... A0A2S9PLG4 27423480 PDBbind: -logKd/Ki=4.65, IC50=22.5uM
    19024 5jqb:B (2.68) BS01 IBP ? N/A Q05320 27362232 PDBbind: -logKd/Ki=2.22, Kd=6mM
    19025 5jrq:A (2.287) BS01 6N9 2.7.11.1 GO:0004672 ... P15056 27571413 PDBbind: -logKd/Ki=6.77, IC50=169nM
    19026 5jrq:B (2.287) BS01 6N9 2.7.11.1 GO:0004672 ... P15056 27571413 PDBbind: -logKd/Ki=6.77, IC50=169nM
    19027 5jrs:A (1.97) BS01 6MV 2.7.10.2 GO:0004672 ... Q06187 27531604 MOAD: ic50=4nM
    PDBbind: -logKd/Ki=8.40, IC50=4nM
    BindingDB: IC50=30nM
    19028 5js3:E (1.16) BS06 6MG 3.4.24.27 GO:0004222 ... P00800 27933956 MOAD: Kd=0.185uM
    PDBbind: -logKd/Ki=6.73, Kd=0.185uM
    19029 5jsg:A (2.5) BS01 6P9 ? GO:0007276 ... Q9Y657 28504676 MOAD: Kd=14.2uM
    PDBbind: -logKd/Ki=4.85, Kd=14.2uM
    19030 5jsj:A (2.348) BS01 6PD ? GO:0007276 ... Q9Y657 28504676 MOAD: Kd=4uM
    PDBbind: -logKd/Ki=5.40, Kd=4uM
    BindingDB: Kd=4000nM
    19031 5jsm:A (2.19) BS01 6NB 2.7.11.1 GO:0004672 ... P15056 27571413 PDBbind: -logKd/Ki=6.59, IC50=260nM
    19032 5jsm:B (2.19) BS01 6NB 2.7.11.1 GO:0004672 ... P15056 27571413 MOAD: ic50=260nM
    PDBbind: -logKd/Ki=6.59, IC50=260nM
    19033 5jsq:A (1.503) BS01 6MS 2.4.2.8 GO:0000166 ... Q07010 27786284 MOAD: Ki=21.3uM
    PDBbind: -logKd/Ki=4.67, Ki=21.3uM
    19034 5jss:E (1.19) BS06 6NG 3.4.24.27 GO:0004222 ... P00800 27933956 MOAD: Kd=0.354uM
    PDBbind: -logKd/Ki=6.45, Kd=0.354uM
    19035 5jt2:A (2.702) BS01 6NC 2.7.11.1 GO:0004672 ... P15056 27571413 PDBbind: -logKd/Ki=7.47, IC50=33.5nM
    19036 5jt2:B (2.702) BS01 6NC 2.7.11.1 GO:0004672 ... P15056 27571413 PDBbind: -logKd/Ki=7.47, IC50=33.5nM
    19037 5jt9:E (1.26) BS06 7AF 3.4.24.27 GO:0004222 ... P00800 27933956 MOAD: Kd=0.233uM
    PDBbind: -logKd/Ki=6.63, Kd=0.233uM
    19038 5jur:A (2.93) BS01 6NS ? N/A Q30NP1 28197322 PDBbind: -logKd/Ki=8.52, Kd=0.003uM
    19039 5juz:F (2.4) BS01 YL4 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 28208018 MOAD: ic50=3uM
    PDBbind: -logKd/Ki=5.52, IC50=3uM
    BindingDB: IC50=3000nM
    19040 5jv0:F (2.4) BS01 YL5 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 28208018 MOAD: ic50=1.1uM
    PDBbind: -logKd/Ki=5.96, IC50=1.1uM
    BindingDB: IC50=1100nM
    19041 5jv0:F (2.4) BS02 YL5 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 28208018 MOAD: ic50=1.1uM
    PDBbind: -logKd/Ki=5.96, IC50=1.1uM
    BindingDB: IC50=1100nM
    19042 5jv0:F (2.4) BS03 YL5 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 28208018 MOAD: ic50=1.1uM
    PDBbind: -logKd/Ki=5.96, IC50=1.1uM
    BindingDB: IC50=1100nM
    19043 5jv1:F (2.3) BS01 YL6 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 28208018 MOAD: ic50=0.86uM
    PDBbind: -logKd/Ki=6.07, IC50=0.86uM
    19044 5jv1:F (2.3) BS02 YL6 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 28208018 MOAD: ic50=0.86uM
    PDBbind: -logKd/Ki=6.07, IC50=0.86uM
    19045 5jv2:F (2.3) BS02 6O3 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 28208018 MOAD: ic50~100uM
    PDBbind: -logKd/Ki=4.00, IC50~100uM
    19046 5jv2:F (2.3) BS03 6O3 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 28208018 MOAD: ic50~100uM
    PDBbind: -logKd/Ki=4.00, IC50~100uM
    19047 5jvi:E (1.12) BS06 6QC 3.4.24.27 GO:0004222 ... P00800 27933956 MOAD: Kd=0.31uM
    PDBbind: -logKd/Ki=6.51, Kd=0.31uM
    19048 5jxn:E (1.38) BS06 6NN 3.4.24.27 GO:0004222 ... P00800 27933956 MOAD: Kd=0.388uM
    PDBbind: -logKd/Ki=6.41, Kd=0.388uM
    19049 5jxq:A (1.2) BS02 6OK 2.4.2.29 GO:0002099 ... P28720 27501913 MOAD: Ki=7nM
    PDBbind: -logKd/Ki=8.15, Ki=7nM
    19050 5jy3:A (2.4) BS01 6OX ? GO:0003677 ... P55055 27994765 MOAD: Ki=12nM
    PDBbind: -logKd/Ki=7.92, Ki=12nM
    BindingDB: EC50=11.0nM, Ki=12nM
    19051 5jyo:D (2.098) BS01 63J 3.5.1.2 GO:0004359 ... O94925 27462863 PDBbind: -logKd/Ki=8.52, IC50=0.003uM
    BindingDB: IC50=5.0nM, Kd=92nM
    19052 5jyp:A (2.74) BS01 ZBS 3.5.1.2 GO:0004359 ... O94925 27462863 PDBbind: -logKd/Ki=7.00, IC50=0.10uM
    BindingDB: IC50=<100nM
    19053 5jyy:A (2.1) BS02 6PY 3.2.1.18 GO:0004308 ... R4NFR6 27341624 PDBbind: -logKd/Ki=8.10, IC50=8nM
    19054 5jz9:A (2.68) BS01 6OR 3.7.1.17
    3.7.1.8    		 GO:0003824 ... P9WNH5 28380256 PDBbind: -logKd/Ki=3.57, IC50=0.27mM
    19055 5jzb:A (2.102) BS01 6OT 3.7.1.17
    3.7.1.8    		 GO:0003824 ... P9WNH5 28380256 MOAD: ic50=0.41mM
    PDBbind: -logKd/Ki=3.39, IC50=0.41mM
    19056 5jzn:A (2.85) BS01 GUI 2.7.11.1 GO:0004672 ... O15075 27545623 PDBbind: -logKd/Ki=5.96, IC50=1084nM
    19057 5jzs:B (2.27) BS01 FGZ 3.7.1.17
    3.7.1.8    		 GO:0003824 ... P9WNH5 28380256 MOAD: ic50=0.54mM
    PDBbind: -logKd/Ki=3.27, IC50=0.54mM
    19058 5k00:A (1.77) BS01 6PV 2.7.10.2
    2.7.11.1    		 GO:0004672 ... Q14680 28186750 MOAD: ic50=7nM
    PDBbind: -logKd/Ki=8.15, IC50=7nM
    19059 5k03:A (1.81) BS01 6P4 2.1.1.6 GO:0000287 ... P22734 27685665 PDBbind: -logKd/Ki=4.74, Kd=18uM
    19060 5k05:A (2.14) BS01 6P5 2.1.1.6 GO:0000287 ... P22734 27685665 PDBbind: -logKd/Ki=4.96, IC50=11uM
    19061 5k07:A (2.0) BS01 dna ? GO:0003677 ... Q97ZE3 27685992 PDBbind: Kd=32.3uM
    19062 5k07:A (2.0) BS02 dna ? GO:0003677 ... Q97ZE3 27685992 PDBbind: Kd=32.3uM
    19063 5k09:A (2.7) BS01 6PQ 2.1.1.6 GO:0000287 ... P22734 27685665 PDBbind: -logKd/Ki=6.00, IC50=1.0uM
    19064 5k0b:A (2.36) BS01 6PS 2.1.1.6 GO:0000287 ... P22734 27685665 PDBbind: -logKd/Ki=6.05, IC50=0.9uM
    19065 5k0c:A (1.95) BS01 6OZ 2.1.1.6 GO:0000287 ... P22734 27685665 PDBbind: -logKd/Ki=5.96, IC50=1.1uM
    19066 5k0f:A (1.81) BS01 6P1 2.1.1.6 GO:0000287 ... P22734 27685665 MOAD: ic50=0.47uM
    PDBbind: -logKd/Ki=6.07, IC50=0.86uM
    19067 5k0h:A (2.2) BS03 6PK 3.4.21.6 GO:0004252 ... P00742 16848746 PDBbind: -logKd/Ki=7.09, Ki=0.081uM
    BindingDB: Ki=29nM
    19068 5k0i:A (1.3) BS01 6PW 1.11.1.-
    2.5.1.18
    5.3.99.3    		 GO:0001516 ... O14684 27554445 MOAD: ic50=0.002uM
    PDBbind: -logKd/Ki=8.70, IC50=0.002uM
    BindingDB: IC50=2.0nM
    19069 5k0j:A (1.94) BS01 6P2 2.1.1.6 GO:0000287 ... P22734 27685665 PDBbind: -logKd/Ki=7.12, IC50=0.075uM
    19070 5k0m:A (1.83) BS01 6PU ? N/A O75530 28135237 PDBbind: -logKd/Ki=8.82, Kd=1.5nM
    19071 5k0s:A (2.45) BS01 0OU 6.1.1.10 GO:0000166 ... P59078 27500735 MOAD: ic50=0.006uM
    PDBbind: -logKd/Ki=8.22, IC50=0.006uM
    19072 5k0t:A (2.6) BS01 415 6.1.1.10 GO:0000166 ... P59078 27500735 PDBbind: -logKd/Ki=5.78, IC50=1.657uM
    19073 5k0x:A (2.231) BS01 K0X 2.7.10.1 GO:0004672 ... Q12866 28032464 MOAD: ic50=4.4nM
    PDBbind: -logKd/Ki=8.36, IC50=4.4nM
    BindingDB: IC50=<10nM
    19074 5k13:A (1.85) BS01 6Q7 ? GO:0003677 ... P10276 27261179 MOAD: Ki=1.8nM
    PDBbind: -logKd/Ki=8.74, Ki=1.8nM
    BindingDB: Ki=1.8nM
    19075 5k17:A (2.1) BS01 dna ? GO:0003677 ... Q97ZE3 27685992 PDBbind: Kd=8.82uM
    19076 5k17:A (2.1) BS02 dna ? GO:0003677 ... Q97ZE3 27685992 PDBbind: Kd=8.82uM
    19077 5k17:B (2.1) BS01 dna ? GO:0003677 ... Q97ZE3 27685992 PDBbind: Kd=8.82uM
    19078 5k17:B (2.1) BS02 dna ? GO:0003677 ... Q97ZE3 27685992 PDBbind: Kd=8.82uM
    19079 5k1d:A (1.94) BS01 5GP 3.5.2.6 GO:0000166 ... Q99QC1 28242658 MOAD: Ki=20.8uM
    PDBbind: -logKd/Ki=4.68, Ki=20.8uM
    19080 5k1f:A (1.94) BS01 IMP 3.5.2.6 GO:0000166 ... Q99QC1 28242658 MOAD: Ki=16.2uM
    PDBbind: -logKd/Ki=4.79, Ki=16.2uM
    19081 5k1i:A (2.61) BS01 6PT 3.1.4.53 GO:0004114 ... Q08499 27933955 PDBbind: -logKd/Ki=8.04, IC50=9.2nM
    19082 5k1v:A (2.897) BS02 6PX 3.4.11.- GO:0002250 ... Q6P179 28337326 PDBbind: -logKd/Ki=5.70, IC50=2uM
    BindingDB: IC50=518nM
    19083 5k32:A (1.99) BS02 6Q2 3.1.4.53 GO:0004114 ... Q08499 29502405 PDBbind: -logKd/Ki=8.80, IC50=1.6nM
    19084 5k48:A (1.744) BS01 S5Z 3.5.2.6 GO:0016787 ... Q9K2N0 29271657 PDBbind: -logKd/Ki=6.60, Kd=0.251uM
    19085 5k4i:A (1.76) BS01 6QB 2.7.11.24 GO:0000165 ... P28482 27227380 MOAD: ic50=3.1nM
    PDBbind: -logKd/Ki=8.51, IC50=3.1nM
    BindingDB: IC50=3.1nM, Kd=1.6nM
    19086 5k4j:A (1.6) BS01 6QB 2.7.11.22 GO:0000082 ... P24941 27227380 PDBbind: -logKd/Ki=7.11, IC50=77.5nM
    19087 5k4l:A (3.179) BS04 6QN 1.14.11.67 GO:0003677 ... P29375 27499454 PDBbind: -logKd/Ki=7.30, IC50=0.05uM
    BindingDB: IC50=50nM
    19088 5k4x:A (1.37) BS01 6Q9 1.1.1.205 GO:0003824 ... G7CNL4 27704782 MOAD: ic50=0.38uM
    PDBbind: -logKd/Ki=6.42, IC50=0.38uM
    19089 5k4z:A (1.64) BS02 6Q8 1.1.1.205 GO:0003824 ... G7CNL4 27704782 MOAD: Kd=0.7uM
    PDBbind: -logKd/Ki=6.15, Kd=0.7uM
    19090 5k51:A (2.956) BS01 6QD 2.4.2.8 GO:0000166 ... Q07010 27786284 PDBbind: -logKd/Ki=4.80, Ki=15.8uM
    19091 5k5e:A (2.8) BS01 6QS 3.1.1.8 GO:0001540 ... P06276 27405689 PDBbind: -logKd/Ki=6.35, IC50=0.443uM
    BindingDB: IC50=443nM
    19092 5k5h:A (3.108) BS01 dna ? N/A P49711 28529057 PDBbind: Kd=30nM
    19093 5k5h:A (3.108) BS02 dna ? N/A P49711 28529057 PDBbind: Kd=30nM
    19094 5k5n:A (2.2) BS01 6QH 2.7.11.1
    2.7.11.26    		 GO:0004672 ... P49841 27355874 MOAD: ic50=9nM
    PDBbind: -logKd/Ki=8.05, IC50=9nM
    19095 5k5s:A (2.6) BS01 TRP ? GO:0004930 ... P41180 27434672 PDBbind: -logKd/Ki=2.69, IC50=2.04mM
    19096 5k6a:A (1.7) BS02 6QT ? GO:0000166 ... O76290 28282886 MOAD: ic50=31uM
    PDBbind: -logKd/Ki=4.51, IC50=31uM
    19097 5k6a:D (1.7) BS02 6QT ? GO:0000166 ... O76290 28282886 MOAD: ic50=31uM
    PDBbind: -logKd/Ki=4.51, IC50=31uM
    19098 5k76:A (2.74) BS01 6R1 2.7.11.1 GO:0000287 ... Q9NWZ3 29172502 PDBbind: -logKd/Ki=8.30, IC50=0.005uM
    BindingDB: IC50=5.0nM, Kd=0.700000nM
    19099 5k7h:A (2.35) BS01 IVC ? GO:0000976 ... Q1D4I5 27940564 MOAD: Kd=0.99uM
    PDBbind: -logKd/Ki=6.00, Kd=0.99uM
    19100 5k7h:A (2.35) BS02 IVC ? GO:0000976 ... Q1D4I5 27940564 MOAD: Kd=0.99uM
    PDBbind: -logKd/Ki=6.00, Kd=0.99uM
    19101 5k7h:B (2.35) BS01 IVC ? GO:0000976 ... Q1D4I5 27940564 MOAD: Kd=0.99uM
    PDBbind: -logKd/Ki=6.00, Kd=0.99uM
    19102 5k7h:B (2.35) BS02 IVC ? GO:0000976 ... Q1D4I5 27940564 MOAD: Kd=0.99uM
    PDBbind: -logKd/Ki=6.00, Kd=0.99uM
    19103 5k83:A (2.39) BS01 dna 3.5.4.-
    3.5.4.38    		 GO:0003824 ... M1GSK9 27480941 PDBbind: Kd=1.57uM
    19104 5k83:C (2.39) BS01 dna 3.5.4.-
    3.5.4.38    		 GO:0003824 ... M1GSK9 27480941 PDBbind: Kd=1.57uM
    19105 5k83:E (2.39) BS01 dna 3.5.4.-
    3.5.4.38    		 GO:0003824 ... M1GSK9 27480941 PDBbind: Kd=1.57uM
    19106 5k8n:A (3.225) BS01 6R6 3.5.99.8 GO:0016787 ... D3WZ85 27694799 PDBbind: -logKd/Ki=6.32, Kd=0.48uM
    19107 5k8n:A (3.225) BS02 6R6 3.5.99.8 GO:0016787 ... D3WZ85 27694799 PDBbind: -logKd/Ki=6.32, Kd=0.48uM
    19108 5k8n:G (3.225) BS01 6R6 3.5.99.8 GO:0016787 ... D3WZ85 27694799 PDBbind: -logKd/Ki=6.32, Kd=0.48uM
    19109 5k8n:G (3.225) BS02 6R6 3.5.99.8 GO:0016787 ... D3WZ85 27694799 PDBbind: -logKd/Ki=6.32, Kd=0.48uM
    19110 5k8o:A (2.893) BS02 6R7 3.5.99.8 GO:0016787 ... D3WZ85 27694799 PDBbind: -logKd/Ki=5.96, Kd=1.09uM
    19111 5k8o:A (2.893) BS03 6R7 3.5.99.8 GO:0016787 ... D3WZ85 27694799 PDBbind: -logKd/Ki=5.96, Kd=1.09uM
    19112 5k8o:H (2.893) BS01 6R7 3.5.99.8 GO:0016787 ... D3WZ85 27694799 PDBbind: -logKd/Ki=5.96, Kd=1.09uM
    19113 5k8o:H (2.893) BS03 6R7 3.5.99.8 GO:0016787 ... D3WZ85 27694799 PDBbind: -logKd/Ki=5.96, Kd=1.09uM
    19114 5k8s:A (1.15) BS01 CMP 2.7.11.11 N/A Q7KQK0 27738107 MOAD: Kd=6nM
    PDBbind: -logKd/Ki=8.22, Kd=6nM
    19115 5k8v:A (2.25) BS01 6RE 2.1.1.319 GO:0016274 ... Q9WVG6 27879050 MOAD: ic50=460nM
    PDBbind: -logKd/Ki=6.34, IC50=460nM
    19116 5k9w:A (2.01) BS01 OTA 3.1.3.48 GO:0004725 ... P18031 28212750 MOAD: Kd=26uM
    PDBbind: -logKd/Ki=4.59, Kd=26uM
    BindingDB: IC50=500000nM, Ki=11500nM
    19117 5ka1:A (1.84) BS01 OTA 3.1.3.48 GO:0004725 ... P18031 28212750 MOAD: Kd=33uM
    PDBbind: -logKd/Ki=4.48, Kd=33uM
    BindingDB: IC50=500000nM, Ki=11500nM
    19118 5ka3:A (2.141) BS01 OTA 3.1.3.48 GO:0004725 ... P18031 28212750 MOAD: Kd=26uM
    PDBbind: -logKd/Ki=4.59, Kd=26uM
    BindingDB: IC50=500000nM, Ki=11500nM
    19119 5ka7:A (2.061) BS01 OTA 3.1.3.48 GO:0004725 ... P18031 28212750 MOAD: Kd=45uM
    PDBbind: -logKd/Ki=4.35, Kd=45uM
    BindingDB: IC50=500000nM, Ki=11500nM
    19120 5ka9:A (2.07) BS01 OTA 3.1.3.48 GO:0004725 ... P18031 28212750 MOAD: Kd=39uM
    PDBbind: -logKd/Ki=4.41, Kd=39uM
    BindingDB: IC50=500000nM, Ki=11500nM
    19121 5kab:A (1.968) BS01 OTA 3.1.3.48 GO:0004725 ... P18031 28212750 PDBbind: -logKd/Ki=4.68, Kd=21uM
    BindingDB: IC50=500000nM, Ki=11500nM
    19122 5kad:A (1.9) BS01 OTA 3.1.3.48 GO:0004725 ... P18031 28212750 MOAD: Kd=37uM
    PDBbind: -logKd/Ki=4.43, Kd=37uM
    BindingDB: IC50=500000nM, Ki=11500nM
    19123 5kam:A (2.481) BS01 IMP 2.4.2.8 GO:0000166 ... Q07010 27786284 MOAD: Ki=77.3uM
    PDBbind: -logKd/Ki=4.11, Ki=77.3uM
    19124 5kap:A (2.95) BS01 6RH 2.4.2.8 GO:0000166 ... Q07010 27786284 PDBbind: -logKd/Ki=4.23, Ki=58.6uM
    19125 5kat:A (2.101) BS01 P4P ? N/A A0A0H3JRN6 27505298 MOAD: Kd=78.7uM
    PDBbind: -logKd/Ki=4.10, Kd=78.7uM
    19126 5kau:A (1.95) BS01 RHQ ? N/A A0A0H3JRN6 27505298 MOAD: Kd=0.3uM
    PDBbind: -logKd/Ki=6.52, Kd=0.30uM
    19127 5kax:A (2.0) BS01 RHQ ? N/A Q8KFZ1 27505298 MOAD: Kd=0.78uM
    PDBbind: -logKd/Ki=6.11, Kd=0.78uM
    19128 5kbe:A (2.5) BS02 IPH ? N/A Q43965 27362503 MOAD: Kd=0.46uM
    PDBbind: -logKd/Ki=6.34, Kd=0.46uM
    19129 5kbf:A (2.0) BS01 CMP 2.7.11.11 GO:0001932 ... Q7KQK0 27738107 MOAD: Kd=1.2nM
    PDBbind: -logKd/Ki=8.92, Kd=1.2nM
    19130 5kbf:A (2.0) BS02 CMP 2.7.11.11 GO:0001932 ... Q7KQK0 27738107 MOAD: Kd=1.2nM
    PDBbind: -logKd/Ki=8.92, Kd=1.2nM
    19131 5kbg:A (2.8) BS02 JZ0 ? N/A Q43965 27362503 PDBbind: -logKd/Ki=6.11, Kd=0.78uM
    19132 5kbh:A (2.55) BS02 3CH ? N/A Q43965 27362503 PDBbind: -logKd/Ki=6.26, Kd=0.55uM
    19133 5kbi:A (2.9) BS02 CAQ ? N/A Q43965 27362503 PDBbind: -logKd/Ki=5.39, Kd=4.12uM
    19134 5kbq:A (2.58) BS01 IPV 2.7.11.1 GO:0004672 ... Q13153 27994749 PDBbind: -logKd/Ki=7.00, IC50=100nM
    BindingDB: IC50=100nM
    19135 5kbr:A (2.36) BS01 IPW 2.7.11.1 GO:0004672 ... Q13153 27994749 MOAD: ic50=260nM
    PDBbind: -logKd/Ki=6.59, IC50=260nM
    19136 5kby:A (2.24) BS01 6RL 3.4.14.5 GO:0001618 ... P27487 27328054 MOAD: Ki=1.5nM
    PDBbind: -logKd/Ki=8.82, Ki=1.5nM
    BindingDB: IC50=1.3nM, Ki=5.1nM
    19137 5kcb:A (2.101) BS01 ET ? N/A A0A0H3JRN6 27505298 MOAD: Kd=0.99uM
    PDBbind: -logKd/Ki=6.00, Kd=0.99uM
    19138 5kcv:A (2.7) BS01 6S1 2.7.11.1 GO:0001649 ... P31749 27305487 PDBbind: -logKd/Ki=8.30, IC50=5nM
    19139 5kcx:A (2.2) BS01 6S3 2.7.11.1 GO:0004672 ... P11309 28947155 PDBbind: -logKd/Ki=6.70, IC50=0.2uM
    BindingDB: IC50=200nM
    19140 5kde:A (2.65) BS01 6RT 3.6.1.1 GO:0000287 ... P9WI55 27622287 PDBbind: -logKd/Ki=3.89, IC50=130uM
    BindingDB: IC50=1.30e+5nM
    19141 5kdf:A (2.45) BS01 6RU 3.6.1.1 GO:0000287 ... P9WI55 27622287 PDBbind: -logKd/Ki=3.27, IC50=540uM
    BindingDB: IC50=5.40e+5nM
    19142 5kdr:A (2.6) BS01 YT5 2.1.3.15 GO:0003824 ... Q2FXM7 27471863 PDBbind: -logKd/Ki=8.30, Ki=5nM
    19143 5kdr:B (2.6) BS01 YT5 2.1.3.15 GO:0003989 ... Q2FXM6 27471863 PDBbind: -logKd/Ki=8.30, Ki=5nM
    19144 5ke0:A (1.68) BS01 6S9 2.7.11.24 GO:0000165 ... P63086 27329786 PDBbind: -logKd/Ki=9.70, IC50=0.2nM
    BindingDB: IC50=0.200000nM
    19145 5ke6:A (1.99) BS01 dna ? N/A Q60793 27596594 PDBbind: Kd=0.19uM
    19146 5ke6:A (1.99) BS02 dna ? N/A Q60793 27596594 PDBbind: Kd=0.19uM
    19147 5ke8:A (2.45) BS01 dna ? N/A Q60793 27596594 PDBbind: Kd<2.3nM
    19148 5ke8:A (2.45) BS02 dna ? N/A Q60793 27596594 PDBbind: Kd<2.3nM
    19149 5ke9:A (2.336) BS01 dna ? N/A Q60793 27596594 PDBbind: Kd<3.6nM
    19150 5ke9:A (2.336) BS02 dna ? N/A Q60793 27596594 PDBbind: Kd<3.6nM
    19151 5keb:A (2.453) BS01 dna ? N/A Q60793 27596594 PDBbind: Kd=0.22uM
    19152 5keb:A (2.453) BS02 dna ? N/A Q60793 27596594 PDBbind: Kd=0.22uM
    19153 5kej:A (2.35) BS01 GTX 2.5.1.18 GO:0004364 ... A0A1P8NWC2 28104507 MOAD: Kd=7.8uM
    PDBbind: -logKd/Ki=5.11, Kd=7.8uM
    19154 5kej:B (2.35) BS01 GTX 2.5.1.18 GO:0004364 ... A0A1P8NWC2 28104507 MOAD: Kd=7.8uM
    PDBbind: -logKd/Ki=5.11, Kd=7.8uM
    19155 5kgw:A (2.34) BS01 7SK 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 27568085 PDBbind: -logKd/Ki=4.79, IC50=16.1uM
    19156 5kgx:A (2.67) BS01 7SK 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 27568085 PDBbind: -logKd/Ki=4.80, IC50=16uM
    19157 5kh3:A (1.6) BS04 6U6 3.5.1.-
    3.5.1.98    		 GO:0008270 ... Q9UBN7 29019676 PDBbind: -logKd/Ki=4.22, Kd=60uM
    BindingDB: IC50=55000nM, Kd=60000nM
    19158 5kh7:A (1.7) BS04 6T7 3.5.1.-
    3.5.1.98    		 GO:0008270 ... Q9UBN7 29019676 PDBbind: -logKd/Ki=3.66, Kd=220uM
    BindingDB: Kd=210000nM, IC50=350000nM
    19159 5khd:A (1.7501) BS01 C2E ? GO:0045892 ... F2RCL8 25171413 MOAD: Kd=2.5uM
    PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    19160 5khd:A (1.7501) BS02 C2E ? GO:0045892 ... F2RCL8 25171413 MOAD: Kd=2.5uM
    PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    19161 5khd:A (1.7501) BS03 C2E ? GO:0045892 ... F2RCL8 25171413 MOAD: Kd=2.5uM
    PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    19162 5khd:A (1.7501) BS04 C2E ? GO:0045892 ... F2RCL8 25171413 MOAD: Kd=2.5uM
    PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    19163 5khd:R (1.7501) BS01 C2E ? GO:0045892 ... F2RCL8 25171413 MOAD: Kd=2.5uM
    PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    19164 5khd:R (1.7501) BS02 C2E ? GO:0045892 ... F2RCL8 25171413 MOAD: Kd=2.5uM
    PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    19165 5khd:R (1.7501) BS03 C2E ? GO:0045892 ... F2RCL8 25171413 MOAD: Kd=2.5uM
    PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    19166 5khd:R (1.7501) BS04 C2E ? GO:0045892 ... F2RCL8 25171413 MOAD: Kd=2.5uM
    PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    19167 5khg:A (2.241) BS01 CC7 ? N/A O88703 27568927 MOAD: Kd=20.23uM
    PDBbind: -logKd/Ki=4.69, Kd=20.23uM
    19168 5khh:A (1.77) BS01 6SW ? N/A O88703 27568927 MOAD: Kd=49.32uM
    PDBbind: -logKd/Ki=4.31, Kd=49.32uM
    19169 5khi:A (2.1) BS01 6SX ? N/A O88703 27568927 MOAD: Kd=0.17uM
    PDBbind: -logKd/Ki=6.77, Kd=0.17uM
    19170 5khj:A (2.01) BS01 6SY ? N/A O88703 27568927 MOAD: Kd=1.33uM
    PDBbind: -logKd/Ki=3.74, Kd=183.8uM
    19171 5khk:A (2.07) BS01 6SZ ? N/A O88703 27568927 MOAD: Kd=0.41uM
    PDBbind: -logKd/Ki=6.39, Kd=0.41uM
    19172 5khm:A (1.48) BS01 XNH ? N/A O60885 27528113 MOAD: Ki=5.012nM
    PDBbind: -logKd/Ki=8.30, Ki=5nM
    BindingDB: Ki=126nM, IC50=20nM
    19173 5khm:B (1.48) BS01 XNH ? N/A O60885 27528113 PDBbind: -logKd/Ki=8.30, Ki=5nM
    BindingDB: Ki=126nM, IC50=20nM
    19174 5khx:A (2.4) BS01 6TE 2.7.10.2 GO:0004672 ... P23458 27827355 PDBbind: -logKd/Ki=7.85, IC50=14nM
    BindingDB: IC50=90nM
    19175 5ki6:A (2.153) BS01 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 27387838 PDBbind: Kd=0.16nM
    19176 5kit:A (1.6) BS01 6TA 2.4.2.12 GO:0005125 ... P43490 27541271 MOAD: ic50=0.013uM
    PDBbind: -logKd/Ki=7.89, IC50=0.013uM
    BindingDB: IC50=47.9nM
    19177 5kit:B (1.6) BS01 6TA 2.4.2.12 GO:0005125 ... P43490 27541271 MOAD: ic50=0.013uM
    PDBbind: -logKd/Ki=7.89, IC50=0.013uM
    BindingDB: IC50=47.9nM
    19178 5kj0:A (1.51) BS01 6TB ? N/A O60885 27862999 MOAD: ic50=130nM
    PDBbind: -logKd/Ki=6.89, IC50=130nM
    BindingDB: IC50=100nM
    19179 5kjk:A (1.93) BS04 6T1 2.1.1.-
    2.1.1.354    		 GO:0000122 ... Q9NRG4 28002961 MOAD: ic50=0.012uM
    PDBbind: -logKd/Ki=7.92, IC50=0.012uM
    19180 5kjm:A (2.19) BS02 6TM 2.1.1.-
    2.1.1.354    		 GO:0000122 ... Q9NRG4 28002961 MOAD: ic50=0.065uM
    PDBbind: -logKd/Ki=7.19, IC50=0.065uM
    19181 5kjn:A (2.72) BS07 6TL 2.1.1.-
    2.1.1.354    		 GO:0000122 ... Q9NRG4 28002961 PDBbind: -logKd/Ki=7.77, IC50=0.017uM
    19182 5kk8:A (2.11) BS01 ADP N/A GO:0004550 ... A0A3Q0KJ78 31103556 PDBbind: -logKd/Ki=5.84, Kd=1.45uM
    19183 5kkq:A (1.744) BS01 dna ? N/A P49711 28529057 PDBbind: Kd=9nM
    19184 5kkq:A (1.744) BS02 dna ? N/A P49711 28529057 PDBbind: Kd=9nM
    19185 5kkq:D (1.744) BS01 dna ? N/A P49711 28529057 PDBbind: Kd=9nM
    19186 5kkq:D (1.744) BS02 dna ? N/A P49711 28529057 PDBbind: Kd=9nM
    19187 5kkr:B (3.509) BS01 6U7 2.7.11.1 GO:0004672 ... Q6VAB6 27556948 PDBbind: -logKd/Ki=6.92, IC50=120nM
    BindingDB: IC50=120nM
    19188 5kks:A (3.3) BS01 6U1 2.7.11.1 GO:0004672 ... Q13464 N/A PDBbind: -logKd/Ki=8.70, Ki=2nM
    BindingDB: Ki=2.0nM
    19189 5kkt:A (2.8) BS01 6U2 2.7.11.1 GO:0004672 ... Q13464 N/A PDBbind: -logKd/Ki=9.00, Ki<1nM
    BindingDB: Ki=<1.000000nM
    19190 5kl1:A (3.701) BS01 rna ? GO:0003723 ... P25822 27482653 PDBbind: Kd=8.7nM
    19191 5kl1:B (3.701) BS01 rna ? GO:0003723 ... P25724 27482653 PDBbind: Kd=8.7nM
    19192 5kl8:A (4.0) BS01 rna ? GO:0003723 ... P25822 27482653 PDBbind: Kd=12nM
    19193 5kl8:B (4.0) BS01 rna ? GO:0003723 ... P25724 27482653 PDBbind: Kd=12nM
    19194 5kla:A (1.14) BS01 rna ? GO:0003723 ... P25822 27482653 PDBbind: Kd=26.3nM
    19195 5klp:A (2.002) BS01 IHP 2.3.1.- GO:0000822 ... Q6VE93 27525589 MOAD: Kd=22.7uM
    PDBbind: -logKd/Ki=4.64, Kd=22.7uM
    19196 5kly:A (1.3) BS01 6UR 3.4.22.-
    3.9.1.-    		 GO:0000118 ... P49773 28968488 PDBbind: -logKd/Ki=7.21, Kd=0.061uM
    19197 5kly:B (1.3) BS01 6UR 3.4.22.-
    3.9.1.-    		 GO:0000118 ... P49773 28968488 PDBbind: -logKd/Ki=7.21, Kd=0.061uM
    19198 5klz:B (1.5) BS01 AMP 3.4.22.-
    3.9.1.-    		 GO:0000118 ... P49773 28968488 PDBbind: -logKd/Ki=6.37, Kd=0.423uM
    19199 5km0:A (1.533) BS01 IMP 3.4.22.-
    3.9.1.-    		 GO:0000118 ... P49773 28968488 PDBbind: -logKd/Ki=5.31, Kd=4.9uM
    19200 5km1:A (1.65) BS01 5GP 3.4.22.-
    3.9.1.-    		 GO:0000118 ... P49773 28968488 PDBbind: -logKd/Ki=6.18, Kd=0.663uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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