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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    17001 4zx0:A (1.6) BS02 5L2 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 26203869 PDBbind: -logKd/Ki=8.00, Ki=10nM
    17002 4zx1:A (1.501) BS02 5L3 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 26203869 PDBbind: -logKd/Ki=6.14, Ki=725nM
    17003 4zx3:A (2.0) BS02 4TK 3.4.11.- GO:0006508 ... O96935 26807544 MOAD: Ki=0.065uM
    PDBbind: -logKd/Ki=7.19, Ki=0.065uM
    17004 4zx4:A (1.9) BS01 4TL 3.4.11.- GO:0006508 ... O96935 26807544 MOAD: Ki=0.078uM
    PDBbind: -logKd/Ki=7.11, Ki=0.078uM
    17005 4zx5:A (1.95) BS02 4TM 3.4.11.- GO:0006508 ... O96935 26807544 MOAD: Ki=0.64uM
    PDBbind: -logKd/Ki=6.19, Ki=0.64uM
    17006 4zx6:A (2.05) BS02 4U6 3.4.11.- GO:0006508 ... O96935 26807544 MOAD: Ki=5.4uM
    PDBbind: -logKd/Ki=5.27, Ki=5.4uM
    17007 4zx8:A (2.7) BS01 4TY 3.4.11.1 GO:0005737 ... A0A024V0B1 26807544 PDBbind: -logKd/Ki=7.10, Ki=0.080uM
    17008 4zx8:F (2.7) BS01 4TY 3.4.11.1 GO:0005737 ... A0A024V0B1 26807544 PDBbind: -logKd/Ki=7.10, Ki=0.080uM
    17009 4zx9:A (2.6) BS01 4TK 3.4.11.1 GO:0005737 ... A0A024V0B1 26807544 PDBbind: -logKd/Ki=7.39, Ki=0.041uM
    17010 4zx9:F (2.6) BS01 4TK 3.4.11.1 GO:0005737 ... A0A024V0B1 26807544 PDBbind: -logKd/Ki=7.39, Ki=0.041uM
    17011 4zxx:H (2.6) BS01 4T0 3.4.21.21 GO:0004252 ... P08709 26151189 PDBbind: -logKd/Ki=8.10, Ki=8nM
    BindingDB: Ki=8.0nM
    17012 4zxy:H (2.06) BS01 4T1 3.4.21.21 GO:0004252 ... P08709 26151189 MOAD: Ki=400nM
    PDBbind: -logKd/Ki=6.40, Ki=400nM
    BindingDB: Ki=400nM
    17013 4zy0:A (2.2) BS01 4TM 3.4.11.1 GO:0005737 ... A0A024V0B1 26807544 MOAD: Ki=0.0091uM
    PDBbind: -logKd/Ki=8.04, Ki=0.0091uM
    17014 4zy0:F (2.2) BS01 4TM 3.4.11.1 GO:0005737 ... A0A024V0B1 26807544 MOAD: Ki=0.0091uM
    PDBbind: -logKd/Ki=8.04, Ki=0.0091uM
    17015 4zy1:A (2.5) BS01 4U5 3.4.11.1 GO:0005737 ... A0A024V0B1 26807544 MOAD: Ki=0.0072uM
    PDBbind: -logKd/Ki=8.14, Ki=0.0072uM
    17016 4zy1:F (2.5) BS01 4U5 3.4.11.1 GO:0005737 ... A0A024V0B1 26807544 MOAD: Ki=0.0072uM
    PDBbind: -logKd/Ki=8.14, Ki=0.0072uM
    17017 4zy2:A (2.1) BS04 4TL 3.4.11.1 GO:0005737 ... A0A0L7M119 26807544 MOAD: Ki=0.06uM
    PDBbind: -logKd/Ki=7.22, Ki=0.060uM
    17018 4zy2:F (2.1) BS04 4TL 3.4.11.1 GO:0005737 ... A0A0L7M119 26807544 MOAD: Ki=0.06uM
    PDBbind: -logKd/Ki=7.22, Ki=0.060uM
    17019 4zy4:A (2.6) BS01 4T3 2.7.11.1 GO:0004672 ... Q13153 26030457 PDBbind: -logKd/Ki=7.66, Ki=22nM
    BindingDB: Ki=22nM
    17020 4zy5:A (2.35) BS01 4T5 2.7.11.1 GO:0004672 ... Q13153 26030457 MOAD: Ki=26nM
    PDBbind: -logKd/Ki=7.59, Ki=26nM
    17021 4zy6:A (2.15) BS01 4T6 2.7.11.1 GO:0004672 ... Q13153 26030457 MOAD: Ki=5nM
    PDBbind: -logKd/Ki=8.30, Ki=5nM
    17022 4zyc:A (1.95) BS01 4SS 2.3.2.27 GO:0005634 ... Q00987 26141769 MOAD: ic50=0.38uM
    PDBbind: -logKd/Ki=6.42, IC50=0.38uM
    17023 4zyc:A (1.95) BS02 4SS 2.3.2.27 GO:0005634 ... Q00987 26141769 MOAD: ic50=0.38uM
    PDBbind: -logKd/Ki=6.42, IC50=0.38uM
    17024 4zyf:A (1.8) BS01 4T4 2.3.2.27 GO:0005634 ... Q00987 26181851 MOAD: Kd=2.3nM
    PDBbind: -logKd/Ki=8.64, Kd=2.3nM
    BindingDB: IC50=0.8nM, Ki=1.3nM, Kd=2.3nM
    17025 4zyi:A (1.67) BS01 4TH 2.3.2.27 GO:0005634 ... Q00987 26181851 MOAD: ic50=0.008uM
    PDBbind: -logKd/Ki=8.10, IC50=0.008uM
    17026 4zyq:A (2.6) BS01 4U6 3.4.11.1 GO:0005737 ... A0A024V0B1 26807544 PDBbind: -logKd/Ki=8.01, Ki=0.0097uM
    17027 4zyq:F (2.6) BS01 4U6 3.4.11.1 GO:0005737 ... A0A024V0B1 26807544 PDBbind: -logKd/Ki=8.01, Ki=0.0097uM
    17028 4zyr:A (3.312) BS01 9PG ? GO:0005351 ... P02920 26157133 PDBbind: -logKd/Ki=5.70, Kd~2uM
    17029 4zyt:A (1.702) BS02 3Y9 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 27439469 MOAD: Ki=17nM
    PDBbind: -logKd/Ki=7.77, Ki=17nM
    BindingDB: IC50=6.8nM
    17030 4zyu:A (1.95) BS02 3YA 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 27439469 MOAD: Ki=1067nM
    PDBbind: -logKd/Ki=5.97, Ki=1067nM
    17031 4zyv:A (2.053) BS02 G71 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 27439469 MOAD: Ki=22nM
    PDBbind: -logKd/Ki=7.66, Ki=22nM
    17032 4zyw:A (2.05) BS02 G94 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 27439469 MOAD: Ki=68nM
    PDBbind: -logKd/Ki=7.17, Ki=68nM
    17033 4zyx:A (1.65) BS02 3YB 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 27439469 MOAD: Ki=7nM
    PDBbind: -logKd/Ki=8.15, Ki=7nM
    BindingDB: IC50=0.600000nM
    17034 4zyy:A (1.85) BS02 3YC 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 27439469 MOAD: Ki=9nM
    PDBbind: -logKd/Ki=8.05, Ki=9nM
    BindingDB: IC50=2.03nM
    17035 4zyz:A (1.6) BS02 3YD 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 27439469 MOAD: Ki=67nM
    PDBbind: -logKd/Ki=7.17, Ki=67nM
    BindingDB: IC50=2.9nM
    17036 4zz0:A (1.65) BS02 3YE 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 27439469 MOAD: Ki=99nM
    PDBbind: -logKd/Ki=7.00, Ki=99nM
    BindingDB: IC50=5.5nM
    17037 4zz1:A (1.351) BS02 3YF 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 26317331 MOAD: Ki=13nM
    PDBbind: -logKd/Ki=7.89, Ki=13nM
    BindingDB: IC50=2.4nM, Ki=13nM
    17038 4zz2:A (1.451) BS02 3YG 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 26317331 MOAD: Ki=9.1nM
    PDBbind: -logKd/Ki=8.04, Ki=9.1nM
    BindingDB: Ki=9.1nM, IC50=2.6nM
    17039 4zz3:A (2.504) BS01 4DW 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 26317331 MOAD: Ki=1000nM
    PDBbind: -logKd/Ki=6.00, Ki=1000nM
    17040 4zzx:A (1.65) BS01 FSU 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9UGN5 26222319 MOAD: Kd=0.125uM
    PDBbind: -logKd/Ki=6.90, Kd=0.125uM
    BindingDB: Kd=125nM
    17041 4zzy:A (2.2) BS01 D7N 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9UGN5 26222319 MOAD: Kd=1.389uM
    PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    BindingDB: Kd=1389nM
    17042 4zzz:A (1.9) BS01 FSU 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P09874 26222319 MOAD: Kd=0.087uM
    PDBbind: -logKd/Ki=7.06, Kd=0.087uM
    BindingDB: Kd=87nM, IC50=5300nM
    17043 5a00:A (2.75) BS01 D7N 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P09874 26222319 PDBbind: -logKd/Ki=7.52, Kd<0.03uM
    BindingDB: Kd=8.6nM, IC50=40nM
    17044 5a09:A (1.81) BS02 JJD 3.4.21.37 GO:0000122 ... P08246 26083237 MOAD: ic50=3.5nM
    PDBbind: -logKd/Ki=8.46, IC50=3.5nM
    BindingDB: IC50=3.5nM
    17045 5a0a:E (1.78) BS02 JJS 3.4.21.37 GO:0000122 ... P08246 26083237 MOAD: Ki=15nM
    PDBbind: -logKd/Ki=7.70, IC50=20nM
    BindingDB: IC50=15nM, Ki=15nM
    17046 5a0b:A (2.23) BS02 JJX 3.4.21.37 GO:0000122 ... P08246 26083237 MOAD: ic50=5nM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    17047 5a0c:A (2.1) BS02 JJV 3.4.21.37 GO:0000122 ... P08246 26083237 MOAD: ic50=0.54nM
    PDBbind: -logKd/Ki=9.27, IC50=0.54nM
    BindingDB: IC50=<0.300000nM
    17048 5a14:A (2.0) BS01 LQ5 2.7.11.22 GO:0000082 ... P24941 26158339 PDBbind: -logKd/Ki=7.30, Kd=50nM
    BindingDB: Kd=53nM, IC50=>1.0e+4nM
    17049 5a14:A (2.0) BS02 LQ5 2.7.11.22 GO:0000082 ... P24941 26158339 PDBbind: -logKd/Ki=7.30, Kd=50nM
    BindingDB: Kd=53nM, IC50=>1.0e+4nM
    17050 5a2s:A (2.65) BS01 OTF 3.5.1.98 N/A P56524 26819662 PDBbind: -logKd/Ki=7.70, Kd=0.02uM
    BindingDB: Kd=20nM
    17051 5a3n:A (2.0) BS05 LQT 1.14.11.67 N/A Q9UGL1 28262558 MOAD: ic50=19nM
    PDBbind: -logKd/Ki=7.72, IC50=19nM
    BindingDB: IC50=19nM
    17052 5a3o:A (1.6) BS03 MMA ? GO:0030246 ... Q9HYN5 27308201 PDBbind: -logKd/Ki=4.73, Kd=18.5uM
    17053 5a3o:B (1.6) BS03 MMA ? GO:0030246 ... Q9HYN5 27308201 PDBbind: -logKd/Ki=4.73, Kd=18.5uM
    17054 5a3o:B (1.6) BS04 DH6 ? GO:0030246 ... Q9HYN5 27308201 PDBbind: -logKd/Ki=4.73, Kd=18.5uM
    17055 5a3q:A (3.05) BS02 DL5 7.2.2.10 GO:0000166 ... P04191 27050689 PDBbind: -logKd/Ki=8.60, Kd=2.5nM
    17056 5a3r:A (3.05) BS01 DL5 7.2.2.10 GO:0000166 ... P04191 27050689 PDBbind: -logKd/Ki=7.78, Kd=16.7nM
    17057 5a3s:A (3.3) BS02 128 7.2.2.10 GO:0000166 ... P04191 27050689 PDBbind: -logKd/Ki=8.68, Kd=2.1nM
    17058 5a3t:A (1.9) BS02 MMK 1.14.11.67 N/A Q9UGL1 27214403 MOAD: Ki=0.001uM
    PDBbind: -logKd/Ki=8.40, IC50=0.004uM
    17059 5a3u:A (3.3) BS02 R8J 1.14.11.29 GO:0005506 ... Q9GZT9 26147748 PDBbind: -logKd/Ki=8.32, IC50=4.8nM
    17060 5a3u:C (3.3) BS02 R8J 1.14.11.29 GO:0005506 ... Q9GZT9 26147748 PDBbind: -logKd/Ki=8.32, IC50=4.8nM
    17061 5a3w:A (2.0) BS03 PD2 1.14.11.67 N/A Q9UGL1 27214403 MOAD: Ki=0.39uM
    PDBbind: -logKd/Ki=5.82, IC50=1.5uM
    BindingDB: IC50=3000nM
    17062 5a3x:A (2.26) BS01 QIV 2.7.11.23
    2.7.12.1    		 GO:0004672 ... Q13627 27736065 MOAD: ic50=0.8uM
    PDBbind: -logKd/Ki=6.10, IC50=0.8uM
    17063 5a46:A (2.63) BS01 38O 2.7.10.1 GO:0004672 ... P11362 26203596 PDBbind: -logKd/Ki=7.66, Kd=22nM
    17064 5a4c:A (2.09) BS01 XOJ 2.7.10.1 GO:0004672 ... P11362 26203596 MOAD: Kd=5.7nM
    PDBbind: -logKd/Ki=8.24, Kd=5.7nM
    17065 5a4e:A (2.68) BS01 7QQ 2.7.11.23
    2.7.12.1    		 GO:0004672 ... Q13627 27736065 PDBbind: -logKd/Ki=6.40, IC50=0.4uM
    17066 5a4l:A (2.73) BS01 ZC3 2.7.11.23
    2.7.12.1    		 GO:0004672 ... Q13627 27736065 PDBbind: -logKd/Ki=5.41, IC50=3.9uM
    17067 5a4q:A (2.37) BS01 Y3L 2.7.11.23
    2.7.12.1    		 GO:0004672 ... Q13627 27736065 MOAD: ic50=2.9uM
    PDBbind: -logKd/Ki=5.54, IC50=2.9uM
    17068 5a4t:A (2.15) BS01 AJG 2.7.11.23
    2.7.12.1    		 GO:0004672 ... Q13627 27736065 MOAD: ic50=1.3uM
    PDBbind: -logKd/Ki=5.89, IC50=1.3uM
    17069 5a54:A (2.63) BS01 5PW 2.7.11.23
    2.7.12.1    		 GO:0004672 ... Q13627 27736065 PDBbind: -logKd/Ki=6.15, IC50=0.7uM
    17070 5a5d:A (1.74) BS02 5LC ? GO:0006826 ... Q0P8Q4 28383577 MOAD: Kd<10nM
    PDBbind: -logKd/Ki=8.00, Kd<10nM
    17071 5a5o:A (2.04) BS01 J5I 3.6.1.- N/A Q6PL18 26155854 PDBbind: -logKd/Ki=3.00, IC50>1mM
    BindingDB: IC50=<1000000nM
    17072 5a5p:A (2.03) BS01 JTF 3.6.1.- N/A Q6PL18 26155854 MOAD: ic50=0.1mM
    PDBbind: -logKd/Ki=4.00, IC50=100uM
    BindingDB: IC50=100000nM
    17073 5a5q:A (1.97) BS01 6XC 3.6.1.- N/A Q6PL18 26155854 MOAD: Kd=21uM
    PDBbind: -logKd/Ki=4.68, Kd=21uM
    BindingDB: IC50=15849nM, Kd=21000nM
    17074 5a5r:A (2.01) BS01 NP8 3.6.1.- N/A Q6PL18 26155854 MOAD: ic50=1.3uM
    PDBbind: -logKd/Ki=5.90, IC50=1.26uM
    BindingDB: IC50=3981nM
    17075 5a5s:A (1.36) BS01 NP8 ? N/A O60885 26155854 MOAD: ic50=1.3uM
    PDBbind: -logKd/Ki=5.90, IC50=1.26uM
    BindingDB: IC50=15849nM
    17076 5a5v:A (2.04) BS02 PXJ ? GO:0006826 ... Q0P8Q4 28383577 MOAD: Kd=33nM
    PDBbind: -logKd/Ki=7.48, Kd=33nM
    17077 5a5z:A (2.6) BS03 WJZ 3.5.2.6 GO:0008270 ... C7C422 25815530 PDBbind: -logKd/Ki=4.08, IC50=84uM
    17078 5a69:A (2.2) BS01 OGN ? GO:0004553 ... A0A0H2US73 26491009 MOAD: Ki=1.1nM
    PDBbind: -logKd/Ki=8.96, Ki=1.1nM
    17079 5a6a:A (2.69) BS01 NGT 3.2.1.52 GO:0004553 ... A0A0H2US73 26491009 PDBbind: -logKd/Ki=7.22, Ki=60.6nM
    17080 5a6a:B (2.69) BS01 NGT 3.2.1.52 GO:0004553 ... A0A0H2US73 26491009 PDBbind: -logKd/Ki=7.22, Ki=60.6nM
    17081 5a6b:A (1.77) BS01 OAN ? GO:0004553 ... A0A0H2US73 26491009 MOAD: Ki=7.9nM
    PDBbind: -logKd/Ki=8.10, Ki=7.9nM
    17082 5a6b:B (1.77) BS01 OAN ? GO:0004553 ... A0A0H2US73 26491009 MOAD: Ki=7.9nM
    PDBbind: -logKd/Ki=8.10, Ki=7.9nM
    17083 5a6h:A (1.57) BS02 OE2 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 27172398 MOAD: Ki=88nM
    PDBbind: -logKd/Ki=7.06, Ki=88.0nM
    BindingDB: Ki=88nM
    17084 5a6h:A (1.57) BS03 OE2 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 27172398 MOAD: Ki=88nM
    PDBbind: -logKd/Ki=7.06, Ki=88.0nM
    BindingDB: Ki=88nM
    17085 5a6h:A (1.57) BS04 OE2 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 27172398 MOAD: Ki=88nM
    PDBbind: -logKd/Ki=7.06, Ki=88.0nM
    BindingDB: Ki=88nM
    17086 5a6i:A (1.86) BS01 TCW ? GO:0005179 ... P02766 26902880 MOAD: Kd=56nM
    PDBbind: -logKd/Ki=7.25, Kd=56nM
    BindingDB: Kd=56nM
    17087 5a6k:A (2.1) BS01 NSG 3.2.1.52 GO:0004553 ... A0A0H2US73 26491009 MOAD: Ki=1130nM
    PDBbind: -logKd/Ki=5.95, Ki=1130nM
    17088 5a6k:B (2.1) BS01 NSG 3.2.1.52 GO:0004553 ... A0A0H2US73 26491009 MOAD: Ki=1130nM
    PDBbind: -logKd/Ki=5.95, Ki=1130nM
    17089 5a6n:A (1.7) BS01 U7E 2.7.11.1 GO:0004672 ... O43293 26486226 MOAD: ic50=52uM
    PDBbind: -logKd/Ki=4.28, IC50=52uM
    17090 5a6x:A (1.55) BS03 MFU ? GO:0030246 ... A0A0H2ZE85 30155149 PDBbind: -logKd/Ki=6.69, Kd=202nM
    17091 5a6x:B (1.55) BS03 MFU ? GO:0030246 ... A0A0H2ZE85 30155149 PDBbind: -logKd/Ki=6.69, Kd=202nM
    17092 5a72:A (2.6) BS01 dna 3.1.-.- GO:0004519 ... P56347 26363068 PDBbind: Kd=53.3nM
    17093 5a72:A (2.6) BS02 dna 3.1.-.- GO:0004519 ... P56347 26363068 PDBbind: Kd=53.3nM
    17094 5a72:B (2.6) BS01 dna 3.1.-.- GO:0004519 ... P56347 26363068 PDBbind: Kd=53.3nM
    17095 5a72:B (2.6) BS02 dna 3.1.-.- GO:0004519 ... P56347 26363068 PDBbind: Kd=53.3nM
    17096 5a77:A (2.5) BS01 dna 3.1.-.- GO:0004519 ... P56347 26363068 PDBbind: Kd=315nM
    17097 5a77:A (2.5) BS02 dna 3.1.-.- GO:0004519 ... P56347 26363068 PDBbind: Kd=315nM
    17098 5a77:A (2.5) BS03 dna 3.1.-.- GO:0004519 ... P56347 26363068 PDBbind: Kd=315nM
    17099 5a77:B (2.5) BS01 dna 3.1.-.- GO:0004519 ... P56347 26363068 PDBbind: Kd=315nM
    17100 5a77:B (2.5) BS02 dna 3.1.-.- GO:0004519 ... P56347 26363068 PDBbind: Kd=315nM
    17101 5a77:B (2.5) BS03 dna 3.1.-.- GO:0004519 ... P56347 26363068 PDBbind: Kd=315nM
    17102 5a7b:A (1.4) BS02 KMN ? GO:0000976 ... P04637 26378745 MOAD: Kd=271uM
    PDBbind: -logKd/Ki=3.57, Kd=271uM
    17103 5a7c:A (1.9) BS01 5D4 ? N/A Q15059 26941288 MOAD: ic50=0.00018M
    PDBbind: -logKd/Ki=3.74, IC50=180uM
    17104 5a7i:A (2.89) BS01 B6K 3.1.3.36 GO:0016791 ... P32019 26854536 PDBbind: -logKd/Ki=5.26, IC50=5.5uM
    17105 5a7j:A (2.9) BS01 K2Y 3.1.3.36 GO:0016791 ... P32019 26854536 PDBbind: -logKd/Ki=5.20, IC50=6.3uM
    BindingDB: IC50=6300nM
    17106 5a7y:A (2.5) BS01 SAH 2.1.1.218 GO:0005737 ... Q4J894 26673726 PDBbind: -logKd/Ki=4.48, Kd=33uM
    17107 5a81:A (2.03) BS01 78J 3.6.1.- N/A Q6PL18 26230603 MOAD: Kd=2.9uM
    PDBbind: -logKd/Ki=5.54, Kd=2.9uM
    BindingDB: IC50=2512nM, Kd=2300nM
    17108 5a82:A (1.86) BS01 YEJ 3.6.1.- N/A Q6PL18 26230603 MOAD: ic50=2.51uM
    PDBbind: -logKd/Ki=5.60, IC50=2.51uM
    BindingDB: Kd=1100nM, IC50=2512nM
    17109 5a83:A (2.09) BS01 YD3 3.6.1.- N/A Q6PL18 26230603 MOAD: ic50=0.158uM
    PDBbind: -logKd/Ki=6.80, IC50=0.158uM
    BindingDB: IC50=158nM, Kd=60nM
    17110 5a8x:A (2.23) BS02 IUY 3.4.21.37 GO:0000122 ... P08246 26333652 MOAD: ic50=6.5nM
    PDBbind: -logKd/Ki=8.19, IC50=6.5nM
    17111 5a8y:A (1.9) BS02 VBM 3.4.21.37 GO:0000122 ... P08246 26333652 MOAD: ic50=0.17nM
    PDBbind: -logKd/Ki=9.77, IC50=0.17nM
    17112 5a8z:A (2.0) BS03 IUL 3.4.21.37 GO:0000122 ... P08246 26333652 MOAD: ic50=28nM
    PDBbind: -logKd/Ki=7.55, IC50=28nM
    BindingDB: IC50=28nM
    17113 5a9u:A (1.6) BS01 5P8 2.7.10.1 GO:0004672 ... Q9UM73 26698910 MOAD: Ki=0.08nM
    PDBbind: -logKd/Ki=10.10, Ki=0.08nM
    17114 5aa8:A (1.86) BS01 5P8 2.7.10.1 GO:0004672 ... Q9UM73 26698910 MOAD: Ki=8.6nM
    PDBbind: -logKd/Ki=8.07, Ki=8.6nM
    17115 5aa9:A (1.93) BS01 5P8 2.7.10.1 GO:0004672 ... Q9UM73 26698910 MOAD: Ki=6.4nM
    PDBbind: -logKd/Ki=8.19, Ki=6.4nM
    17116 5aaa:A (1.73) BS01 VGH 2.7.10.1 GO:0004672 ... Q9UM73 26698910 MOAD: Ki=0.38nM
    PDBbind: -logKd/Ki=9.42, Ki=0.38nM
    BindingDB: IC50=20nM, Ki=8.2nM, EC50=22840nM, Kd=3.3nM
    17117 5aab:A (2.2) BS01 VGH 2.7.10.1 GO:0004672 ... Q9UM73 26698910 MOAD: Ki=0.88nM
    PDBbind: -logKd/Ki=9.06, Ki=0.88nM
    BindingDB: IC50=20nM, Ki=8.2nM, EC50=22840nM, Kd=3.3nM
    17118 5aac:A (1.7) BS01 VGH 2.7.10.1 GO:0004672 ... Q9UM73 26698910 MOAD: Ki=1.3nM
    PDBbind: -logKd/Ki=8.89, Ki=1.3nM
    BindingDB: IC50=20nM, Ki=8.2nM, EC50=22840nM, Kd=3.3nM
    17119 5aad:A (3.1) BS01 5GX 2.7.11.1 GO:0000212 ... O14965 26296477 PDBbind: -logKd/Ki=6.67, IC50=0.212uM
    17120 5aae:A (3.11) BS01 7HD 2.7.11.1 GO:0000212 ... O14965 26296477 PDBbind: -logKd/Ki=7.46, IC50=0.035uM
    17121 5aaf:A (2.78) BS01 NL4 2.7.11.1 GO:0000212 ... O14965 26296477 PDBbind: -logKd/Ki=7.44, IC50=0.036uM
    17122 5aag:A (2.85) BS01 6F2 2.7.11.1 GO:0000212 ... O14965 26296477 PDBbind: -logKd/Ki=7.34, IC50=0.046uM
    17123 5aan:A (1.6) BS04 XOC ? GO:0005509 ... Q9VWX8 28119500 MOAD: Kd=71uM
    PDBbind: -logKd/Ki=4.15, Kd=71uM
    BindingDB: Kd=71000nM
    17124 5ab9:A (1.36) BS02 92O ? GO:0000976 ... P04637 26636255 MOAD: Kd=470uM
    PDBbind: -logKd/Ki=6.33, Kd=470nM
    17125 5ab9:A (1.36) BS03 92O ? GO:0000976 ... P04637 26636255 MOAD: Kd=470uM
    PDBbind: -logKd/Ki=6.33, Kd=470nM
    17126 5aba:A (1.62) BS02 UL7 ? GO:0000976 ... P04637 26636255 MOAD: Kd=1040uM
    PDBbind: -logKd/Ki=2.98, Kd=1040uM
    17127 5abe:A (2.0) BS01 XQO 3.2.1.169 GO:0005975 ... Q89ZI2 26545827 MOAD: Ki=890uM
    PDBbind: -logKd/Ki=3.05, Ki=890uM
    17128 5abf:A (2.1) BS01 XRJ 3.2.1.169 GO:0005975 ... Q89ZI2 26545827 MOAD: Ki=14uM
    PDBbind: -logKd/Ki=4.85, Ki=14uM
    17129 5abg:A (2.0) BS01 V0N 3.2.1.169 GO:0005975 ... Q89ZI2 26545827 MOAD: Ki=9nM
    PDBbind: -logKd/Ki=8.05, Ki=9nM
    17130 5abh:A (1.95) BS01 YWN 3.2.1.169 GO:0005975 ... Q89ZI2 26545827 MOAD: Ki=1.7nM
    PDBbind: -logKd/Ki=8.77, Ki=1.7nM
    17131 5abp:A (1.8) BS01 GLA ? GO:0015407 ... P02924 2818726 MOAD: Kd=0.23uM
    PDBbind: -logKd/Ki=6.64, Kd=0.23uM
    17132 5abw:A (1.6) BS02 WQQ 3.4.21.37 GO:0000122 ... P08246 26358162 MOAD: ic50=17nM
    PDBbind: -logKd/Ki=7.77, IC50=17nM
    BindingDB: IC50=17nM
    17133 5acb:C (2.7) BS01 5I1 2.7.11.22
    2.7.11.23    		 GO:0004672 ... Q9NYV4 27571479 PDBbind: -logKd/Ki=6.80, IC50=158nM
    17134 5acw:A (1.8) BS03 RHU 3.5.2.6 N/A Q9K2N0 26477515 MOAD: Kd=145uM
    PDBbind: -logKd/Ki=3.84, Kd=145uM
    17135 5acw:A (1.8) BS04 RHU 3.5.2.6 N/A Q9K2N0 26477515 MOAD: Kd=145uM
    PDBbind: -logKd/Ki=3.84, Kd=145uM
    17136 5acx:A (1.8) BS03 WL3 3.5.2.6 N/A Q9K2N0 26477515 MOAD: Kd=9uM
    PDBbind: -logKd/Ki=5.05, Kd=9uM
    17137 5acx:B (1.8) BS03 WL3 3.5.2.6 N/A Q9K2N0 26477515 MOAD: Kd=9uM
    PDBbind: -logKd/Ki=5.05, Kd=9uM
    17138 5acy:A (2.01) BS01 9S3 ? N/A O60885 26392221 MOAD: Kd=6.4nM
    PDBbind: -logKd/Ki=8.19, Kd=6.4nM
    BindingDB: IC50=398nM
    17139 5ad1:A (1.32) BS02 8LC ? GO:0006826 ... Q0P8Q4 28383577 MOAD: Kd=58nM
    PDBbind: -logKd/Ki=7.24, Kd=58nM
    17140 5adq:A (2.1) BS02 A95 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 26706174 MOAD: ic50=2.01uM
    PDBbind: -logKd/Ki=5.70, IC50=2.01uM
    BindingDB: IC50=1995nM
    17141 5adr:A (2.1) BS01 QS5 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 26706174 MOAD: ic50=2.3uM
    PDBbind: -logKd/Ki=5.64, IC50=2.3uM
    BindingDB: IC50=2291nM
    17142 5ads:A (1.8) BS02 QNS 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 26706174 MOAD: ic50=2.15uM
    PDBbind: -logKd/Ki=5.67, IC50=2.15uM
    BindingDB: IC50=2150nM
    17143 5adt:A (2.15) BS02 1TC 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 26706174 MOAD: ic50=2.23uM
    PDBbind: -logKd/Ki=5.65, IC50=2.23uM
    BindingDB: IC50=2230nM
    17144 5aeh:A (1.85) BS01 8IR 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 26706174 MOAD: ic50=0.037uM
    PDBbind: -logKd/Ki=7.43, IC50=0.037uM
    BindingDB: IC50=37nM
    17145 5ael:A (2.6) BS01 QAF 2.5.1.10 GO:0004161 ... Q86C09 26392508 PDBbind: -logKd/Ki=7.41, Kd=39.2nM
    17146 5ael:B (2.6) BS01 QAF 2.5.1.10 GO:0004161 ... Q86C09 26392508 PDBbind: -logKd/Ki=7.41, Kd=39.2nM
    17147 5aen:A (1.864) BS01 DP8 3.3.2.6
    3.4.11.4    		 GO:0003723 ... P09960 25625859 MOAD: ic50=0.06uM
    PDBbind: -logKd/Ki=7.22, IC50=0.06uM
    BindingDB: Kd=270nM, IC50=60nM, Ki=160nM
    17148 5aep:A (1.95) BS01 QUP 2.7.10.2 GO:0004672 ... O60674 25882525 MOAD: ic50=0.068uM
    PDBbind: -logKd/Ki=7.17, IC50=0.068uM
    BindingDB: IC50=68nM
    17149 5aes:A (2.751) BS02 5B0 3.1.3.16
    3.1.3.74    		 GO:0000287 ... P60487 25783190 PDBbind: -logKd/Ki=2.89, IC50~1.3mM
    BindingDB: IC50=1300000nM
    17150 5aes:B (2.751) BS02 5B0 3.1.3.16
    3.1.3.74    		 GO:0000287 ... P60487 25783190 PDBbind: -logKd/Ki=2.89, IC50~1.3mM
    BindingDB: IC50=1300000nM
    17151 5afj:A (2.2) BS01 42R ? GO:0004888 ... P36544
    P58154    		 25918415 MOAD: ic50=42uM
    PDBbind: -logKd/Ki=4.38, IC50=42uM
    17152 5afj:A (2.2) BS02 42R ? GO:0004888 ... P36544
    P58154    		 25918415 MOAD: ic50=42uM
    PDBbind: -logKd/Ki=4.38, IC50=42uM
    17153 5afj:B (2.2) BS01 42R ? GO:0004888 ... P36544
    P58154    		 25918415 MOAD: ic50=42uM
    PDBbind: -logKd/Ki=4.38, IC50=42uM
    17154 5afj:B (2.2) BS03 42R ? GO:0004888 ... P36544
    P58154    		 25918415 MOAD: ic50=42uM
    PDBbind: -logKd/Ki=4.38, IC50=42uM
    17155 5afj:B (2.2) BS04 42R ? GO:0004888 ... P36544
    P58154    		 25918415 MOAD: ic50=42uM
    PDBbind: -logKd/Ki=4.38, IC50=42uM
    17156 5afk:A (2.381) BS02 5VU ? GO:0004888 ... P36544
    P58154    		 25918415 MOAD: ic50=132uM
    PDBbind: -logKd/Ki=3.88, IC50=132uM
    17157 5afk:A (2.381) BS04 5VU ? GO:0004888 ... P36544
    P58154    		 25918415 MOAD: ic50=132uM
    PDBbind: -logKd/Ki=3.88, IC50=132uM
    17158 5afk:B (2.381) BS03 5VU ? GO:0004888 ... P36544
    P58154    		 25918415 MOAD: ic50=132uM
    PDBbind: -logKd/Ki=3.88, IC50=132uM
    17159 5afl:E (2.385) BS03 FHV ? GO:0004888 ... P36544
    P58154    		 25918415 MOAD: ic50=398uM
    PDBbind: -logKd/Ki=3.40, IC50=398uM
    17160 5afm:A (2.85) BS02 9Z0 ? GO:0004888 ... P36544
    P58154    		 25918415 PDBbind: -logKd/Ki=4.15, IC50=70uM
    17161 5afm:B (2.85) BS03 9Z0 ? GO:0004888 ... P36544
    P58154    		 25918415 PDBbind: -logKd/Ki=4.15, IC50=70uM
    17162 5afn:A (2.149) BS02 OJD ? GO:0004888 ... P36544
    P58154    		 25918415 MOAD: ic50=34uM
    PDBbind: -logKd/Ki=4.47, IC50=34uM
    17163 5afn:B (2.149) BS03 OJD ? GO:0004888 ... P36544
    P58154    		 25918415 MOAD: ic50=34uM
    PDBbind: -logKd/Ki=4.47, IC50=34uM
    17164 5afv:A (2.25) BS01 JH5 2.7.1.32
    2.7.1.82    		 N/A P35790 27490389 MOAD: Kd=2.6uM
    PDBbind: -logKd/Ki=5.59, Kd=2.6uM
    17165 5afx:A (2.39) BS04 PVZ ? GO:0004161 ... Q86C09 26392508 MOAD: ic50=1.2uM
    PDBbind: -logKd/Ki=5.92, IC50=1.2uM
    17166 5afx:A (2.39) BS05 PVZ ? GO:0004161 ... Q86C09 26392508 MOAD: ic50=1.2uM
    PDBbind: -logKd/Ki=5.92, IC50=1.2uM
    17167 5afx:B (2.39) BS01 PVZ ? GO:0004161 ... Q86C09 26392508 MOAD: ic50=1.2uM
    PDBbind: -logKd/Ki=5.92, IC50=1.2uM
    17168 5afx:B (2.39) BS04 PVZ ? GO:0004161 ... Q86C09 26392508 MOAD: ic50=1.2uM
    PDBbind: -logKd/Ki=5.92, IC50=1.2uM
    17169 5agi:A (1.47) BS01 ANZ N/A GO:0000166 ... N/A 26172575 PDBbind: -logKd/Ki=4.34, Kd=46uM
    17170 5agj:A (2.0) BS01 ANZ N/A GO:0000166 ... N/A 26172575 PDBbind: -logKd/Ki=6.15, Kd=0.7uM
    17171 5agr:A (1.3) BS01 A52 6.1.1.4 GO:0000166 ... P9WFV1 27503647 PDBbind: -logKd/Ki=5.43, Kd=3.7uM
    17172 5ags:A (1.47) BS01 38Y 6.1.1.4 GO:0000166 ... P9WFV1 27503647 PDBbind: -logKd/Ki=7.40, Kd=0.040uM
    17173 5agt:A (1.45) BS01 A2H 6.1.1.4 GO:0000166 ... P9WFV1 27503647 PDBbind: -logKd/Ki=7.12, Kd=0.075uM
    17174 5ahj:H (2.8) BS01 7IM 3.4.25.1 GO:0004298 ... P25043 26050527 PDBbind: -logKd/Ki=8.23, IC50=5.9nM
    17175 5ahj:H (2.8) BS02 7IM 3.4.25.1 GO:0004298 ... P25043 26050527 PDBbind: -logKd/Ki=8.23, IC50=5.9nM
    17176 5ahj:I (2.8) BS01 7IM 3.4.25.1 GO:0000502 ... P25451 26050527 PDBbind: -logKd/Ki=8.23, IC50=5.9nM
    17177 5ahj:Z (2.8) BS01 7IM 3.4.25.1 GO:0000502 ... P23724 26050527 PDBbind: -logKd/Ki=8.23, IC50=5.9nM
    17178 5ahu:B (2.69) BS01 G76 ? GO:0004659 ... Q86C09 26392508 PDBbind: -logKd/Ki=6.78, Kd=167nM
    17179 5ahu:D (2.69) BS01 G76 ? GO:0004659 ... Q86C09 26392508 PDBbind: -logKd/Ki=6.78, Kd=167nM
    17180 5ahw:A (2.15) BS01 CMP ? GO:0000166 ... A0QYW6 25802331 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=5.17, Kd=6.82uM
    17181 5ai0:A (1.75) BS01 JF6 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 25931264 MOAD: ic50=206.4uM
    PDBbind: -logKd/Ki=3.69, IC50=206.4uM
    BindingDB: IC50=206400nM
    17182 5ai1:A (2.103) BS01 EQU 5.3.3.1 GO:0004769 ... P07445 25947291 MOAD: Kd=0.34uM
    PDBbind: -logKd/Ki=6.47, Kd=0.34uM
    17183 5ai4:A (1.93) BS01 4VY 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 25931264 MOAD: ic50=331.7uM
    PDBbind: -logKd/Ki=3.47, IC50=337.1uM
    17184 5ai4:A (1.93) BS02 4VY 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 25931264 MOAD: ic50=331.7uM
    PDBbind: -logKd/Ki=3.47, IC50=337.1uM
    17185 5ai5:A (2.28) BS01 BSU 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 25931264 MOAD: ic50=0.093uM
    PDBbind: -logKd/Ki=7.03, IC50=0.093uM
    BindingDB: IC50=390nM
    17186 5ai6:A (2.3) BS01 4XH 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 25931264 MOAD: ic50=40.19uM
    PDBbind: -logKd/Ki=4.40, IC50=40.19uM
    17187 5ai8:A (1.85) BS01 K2T 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 25931264 MOAD: ic50=125.6uM
    PDBbind: -logKd/Ki=3.90, IC50=125.6uM
    17188 5ai9:A (1.8) BS01 K78 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 25931264 MOAD: ic50=0.244uM
    PDBbind: -logKd/Ki=6.61, IC50=0.244uM
    17189 5aia:A (2.26) BS01 KWB 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 25931264 MOAD: ic50=6.268uM
    PDBbind: -logKd/Ki=5.20, IC50=6.268uM
    17190 5aib:A (1.95) BS01 KJU 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 25931264 MOAD: ic50=160uM
    PDBbind: -logKd/Ki=3.80, IC50=160uM
    17191 5aic:A (1.89) BS01 TGX 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 25931264 MOAD: ic50=49.6uM
    PDBbind: -logKd/Ki=4.30, IC50=49.6uM
    BindingDB: IC50=49600nM
    17192 5aip:A (2.3) BS01 4HP ? GO:0003677 ... Q7DD70 27105075 PDBbind: -logKd/Ki=2.82, Kd=1.5mM
    17193 5aip:B (2.3) BS01 4HP ? GO:0003677 ... Q7DD70 27105075 MOAD: Kd=1.5mM
    PDBbind: -logKd/Ki=2.82, Kd=1.5mM
    17194 5ais:A (1.85) BS01 CWC 2.5.1.18
    5.3.99.2    		 GO:0000287 ... O60760 25978964 MOAD: Kd=0.57uM
    PDBbind: -logKd/Ki=6.24, Kd=0.57uM
    BindingDB: Kd=570nM, IC50=820nM
    17195 5aiv:A (2.04) BS01 M1W 2.5.1.18
    5.3.99.2    		 GO:0000287 ... O60760 25978964 MOAD: Kd=0.65uM
    PDBbind: -logKd/Ki=6.19, Kd=0.65uM
    BindingDB: IC50=170nM, Kd=650nM
    17196 5aix:B (2.1) BS02 KRX 2.5.1.18
    5.3.99.2    		 GO:0000287 ... O60760 25978964 MOAD: Kd=0.012uM
    PDBbind: -logKd/Ki=7.92, Kd=0.012uM
    BindingDB: IC50=60nM, EC50=130nM, Kd=44nM
    17197 5ajc:C (1.7) BS01 SIA ? GO:0030246 ... A0A0S4TLR1 27198630 PDBbind: -logKd/Ki=4.24, Kd=58uM
    17198 5ajc:C (1.7) BS02 FUC ? GO:0030246 ... A0A0S4TLR1 27198630 PDBbind: -logKd/Ki=4.24, Kd=58uM
    17199 5ajc:C (1.7) BS04 FUC ? GO:0030246 ... A0A0S4TLR1 27198630 PDBbind: -logKd/Ki=4.24, Kd=58uM
    17200 5ajv:B (3.01) BS01 8R2 2.7.1.105
    3.1.3.46    		 GO:0003824 ... Q16875 25849762 PDBbind: -logKd/Ki=6.24, IC50=0.575uM
    BindingDB: IC50=>30000nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218