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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    13401 3eoc:A (3.2) BS01 T2A 2.7.11.22 GO:0000082 ... P24941 18929484 PDBbind: -logKd/Ki=6.64, IC50=0.23uM
    BindingDB: IC50=230nM
    13402 3eoc:C (3.2) BS01 T2A 2.7.11.22 GO:0000082 ... P24941 18929484 BindingDB: IC50=230nM
    13403 3eor:A (2.9) BS02 CFV 4.6.1.12 GO:0005515 ... P62617 19320487 PDBbind: -logKd/Ki=1.40, Kd=40mM
    13404 3eos:A (1.78) BS02 PK2 2.4.2.29 GO:0002099 ... P28720 19894214 MOAD: Ki=4nM
    PDBbind: -logKd/Ki=8.40, Ki=4nM
    13405 3eou:A (1.93) BS02 PK3 2.4.2.29 GO:0002099 ... P28720 19894214 MOAD: Ki=97nM
    PDBbind: -logKd/Ki=7.01, Ki=97nM
    13406 3epa:A (2.1) BS02 PUT 4.1.1.50 GO:0004014 ... P17707 19053272 MOAD: Ka=2000M^-1
    13407 3epw:A (1.3) BS02 JMQ 3.2.2.1 GO:0006139 ... Q9GPQ4 19281874 MOAD: Ki=4.4nM
    13408 3epw:B (1.3) BS02 JMQ 3.2.2.1 GO:0006139 ... Q9GPQ4 19281874 MOAD: Ki=4.4nM
    13409 3epx:A (1.85) BS02 IMQ 3.2.2.1 GO:0006139 ... Q9GPQ4 19281874 MOAD: Ki=10.8nM
    13410 3epx:B (1.85) BS02 IMQ 3.2.2.1 GO:0006139 ... Q9GPQ4 19281874 MOAD: Ki=10.8nM
    13411 3eq0:H (1.53) BS03 2TS 3.4.21.5 GO:0004252 ... P00734 N/A BindingDB: Ki=0.290000nM
    13412 3eq7:A (2.89) BS01 X99 3.4.21.26 GO:0004252 ... P23687 19006380 PDBbind: -logKd/Ki=9.09, IC50=0.81nM
    13413 3eq8:A (2.73) BS01 X98 3.4.21.26 GO:0004252 ... P23687 19006380 PDBbind: -logKd/Ki=9.06, IC50=0.88nM
    13414 3eq9:A (2.47) BS01 X97 3.4.21.26 GO:0004252 ... P23687 19006380 MOAD: ic50=41nM
    PDBbind: -logKd/Ki=7.39, IC50=41nM
    13415 3eqb:A (2.62) BS03 LUG 2.7.12.2 GO:0004672 ... Q02750 18951019 PDBbind: -logKd/Ki=1.82, IC50=15mM
    13416 3eqg:A (2.5) BS04 4BM 2.7.12.2 GO:0000165 ... Q02750 19161339 BindingDB: IC50=15nM, Kd=31nM
    13417 3eql:C (2.7) BS01 MXP 2.7.7.6 GO:0000428 ... Q8RQE9 18946472 PDBbind: -logKd/Ki=5.30, IC50=4.99uM
    13418 3eql:D (2.7) BS03 MXP 2.7.7.6 GO:0000287 ... Q8RQE8 18946472 PDBbind: -logKd/Ki=5.30, IC50=4.99uM
    13419 3eqm:A (2.9) BS02 ASD 1.14.14.14 GO:0002677 ... P11511 19129847 BindingDB: IC50=300nM, Ki=20nM
    13420 3eqr:A (2.0) BS01 T74 2.7.10.2
    2.7.11.1    		 GO:0004672 ... Q07912 18993068 MOAD: Ki=0.002uM
    PDBbind: -logKd/Ki=8.70, Ki=2nM
    BindingDB: IC50=20nM, Ki=2nM
    13421 3eqr:B (2.0) BS01 T74 2.7.10.2
    2.7.11.1    		 GO:0004672 ... Q07912 18993068 MOAD: Ki=0.002uM
    BindingDB: IC50=20nM, Ki=2nM
    13422 3eqt:A (2.0) BS01 rna 3.6.4.13 N/A Q96C10 19278996 PDBbind: Kd=105nM
    13423 3eqt:A (2.0) BS02 rna 3.6.4.13 N/A Q96C10 19278996 PDBbind: Kd=105nM
    13424 3eqt:B (2.0) BS01 rna 3.6.4.13 N/A Q96C10 19278996 PDBbind: Kd=105nM
    13425 3eqt:B (2.0) BS02 rna 3.6.4.13 N/A Q96C10 19278996 PDBbind: Kd=105nM
    13426 3er3:E (2.0) BS01 0EL 3.4.23.22 GO:0004190 ... P11838 6381096 MOAD: Ki=81nM
    PDBbind: -logKd/Ki=7.09, Ki=81nM
    13427 3erd:A (2.03) BS02 DES ? N/A P03372 9875847 PDBbind: -logKd/Ki=9.90, Ki=0.126nM
    BindingDB: Ki=0.128000nM, IC50=0.330000nM, EC50=0.110000nM
    13428 3erd:B (2.03) BS03 DES ? N/A P03372 9875847 BindingDB: Ki=0.128000nM, IC50=0.330000nM, EC50=0.110000nM
    13429 3erk:A (2.1) BS01 SB4 2.7.11.24 GO:0000165 ... P63086 9753691 MOAD: ic50=18uM
    PDBbind: -logKd/Ki=4.74, IC50=18uM
    BindingDB: IC50=18000nM
    13430 3ern:A (2.1) BS02 CAR 4.6.1.12 GO:0005515 ... P62617 19320487 MOAD: Kd=18.91mM
    PDBbind: -logKd/Ki=1.72, Kd=18.91mM
    BindingDB: Kd=18910000nM
    13431 3ern:B (2.1) BS01 CAR 4.6.1.12 GO:0005515 ... P62617 19320487 MOAD: Kd=18.91mM
    BindingDB: Kd=18910000nM
    13432 3ern:C (2.1) BS02 CAR 4.6.1.12 GO:0005515 ... P62617 19320487 MOAD: Kd=18.91mM
    PDBbind: -logKd/Ki=1.72, Kd=18.91mM
    BindingDB: Kd=18910000nM
    13433 3ern:D (2.1) BS02 CAR 4.6.1.12 GO:0005515 ... P62617 19320487 MOAD: Kd=18.91mM
    BindingDB: Kd=18910000nM
    13434 3ern:E (2.1) BS01 CAR 4.6.1.12 GO:0005515 ... P62617 19320487 MOAD: Kd=18.91mM
    BindingDB: Kd=18910000nM
    13435 3ert:A (1.9) BS01 OHT ? N/A P03372 9875847 PDBbind: -logKd/Ki=9.60, Ki=0.249nM
    BindingDB: IC50=0.790000nM, EC50=10.3nM, Ki=5.7nM
    13436 3esj:A (2.7) BS02 CC7 4.6.1.12 GO:0005515 ... P62617 19320487 PDBbind: -logKd/Ki=3.03, Kd=0.925mM
    13437 3ess:A (1.191) BS01 18N 2.4.2.36 GO:0047286 ... Q5EK40 19793133 MOAD: ic50=411nM
    PDBbind: -logKd/Ki=6.39, IC50=411nM
    13438 3et7:A (2.7) BS01 349 2.7.10.2 GO:0004672 ... Q14289 18951788 PDBbind: -logKd/Ki=7.77, IC50=17nM
    13439 3eta:A (2.6) BS01 351 2.7.10.1 GO:0004672 ... P06213 19394223 PDBbind: -logKd/Ki=7.85, IC50=14nM
    13440 3etd:A (2.5) BS04 B1T 1.4.1.3 GO:0004352 ... P00366 19531491 MOAD: ic50=4.8uM
    13441 3etd:A (2.5) BS05 B1T 1.4.1.3 GO:0004352 ... P00366 19531491 MOAD: ic50=4.8uM
    13442 3etd:B (2.5) BS04 B1T 1.4.1.3 GO:0004352 ... P00366 19531491 MOAD: ic50=4.8uM
    13443 3etd:C (2.5) BS04 B1T 1.4.1.3 GO:0004352 ... P00366 19531491 MOAD: ic50=4.8uM
    13444 3etd:D (2.5) BS04 B1T 1.4.1.3 GO:0004352 ... P00366 19531491 MOAD: ic50=4.8uM
    13445 3etd:E (2.5) BS01 B1T 1.4.1.3 GO:0004352 ... P00366 19531491 MOAD: ic50=4.8uM
    13446 3etd:F (2.5) BS04 B1T 1.4.1.3 GO:0004352 ... P00366 19531491 MOAD: ic50=4.8uM
    13447 3etg:A (2.5) BS04 GWD 1.4.1.3 GO:0004352 ... P00366 19531491 MOAD: ic50=1.5uM
    13448 3etg:B (2.5) BS04 GWD 1.4.1.3 GO:0004352 ... P00366 19531491 MOAD: ic50=1.5uM
    13449 3etg:C (2.5) BS04 GWD 1.4.1.3 GO:0004352 ... P00366 19531491 MOAD: ic50=1.5uM
    13450 3etg:D (2.5) BS04 GWD 1.4.1.3 GO:0004352 ... P00366 19531491 MOAD: ic50=1.5uM
    13451 3etg:E (2.5) BS04 GWD 1.4.1.3 GO:0004352 ... P00366 19531491 MOAD: ic50=1.5uM
    13452 3etg:F (2.5) BS04 GWD 1.4.1.3 GO:0004352 ... P00366 19531491 MOAD: ic50=1.5uM
    13453 3etq:A (1.9) BS01 CMP ? N/A O88703 19525958 Manual survey: Kd=920+-240nM (19525958)
    13454 3etq:B (1.9) BS01 CMP ? N/A O88703 19525958 Manual survey: Kd=920+-240nM (19525958)
    13455 3eu5:A (2.8) BS01 GBO 2.5.1.58
    2.5.1.59    		 GO:0004659 ... Q04631 19219049 PDBbind: -logKd/Ki=7.49, Kd=32nM
    13456 3eu5:B (2.8) BS02 GBO 2.5.1.58 GO:0003824 ... Q02293 19219049 PDBbind: -logKd/Ki=7.49, Kd=32nM
    13457 3euf:A (1.9) BS01 BAU 2.4.2.3 GO:0003824 ... Q16831 19291308 BindingDB: Kd=1200nM
    13458 3euf:A (1.9) BS03 BAU 2.4.2.3 GO:0003824 ... Q16831 19291308 BindingDB: Kd=1200nM
    13459 3euf:B (1.9) BS01 BAU 2.4.2.3 GO:0003824 ... Q16831 19291308 BindingDB: Kd=1200nM
    13460 3euf:B (1.9) BS02 BAU 2.4.2.3 GO:0003824 ... Q16831 19291308 BindingDB: Kd=1200nM
    13461 3euf:C (1.9) BS01 BAU 2.4.2.3 GO:0003824 ... Q16831 19291308 BindingDB: Kd=1200nM
    13462 3euf:C (1.9) BS03 BAU 2.4.2.3 GO:0003824 ... Q16831 19291308 BindingDB: Kd=1200nM
    13463 3euf:D (1.9) BS01 BAU 2.4.2.3 GO:0003824 ... Q16831 19291308 BindingDB: Kd=1200nM
    13464 3euf:D (1.9) BS02 BAU 2.4.2.3 GO:0003824 ... Q16831 19291308 BindingDB: Kd=1200nM
    13465 3evc:A (1.6) BS02 GTP 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13    		 GO:0004482 ... P03314 19101564 PDBbind: -logKd/Ki=6.91, Kd=124nM
    13466 3evd:A (1.5) BS01 GTP 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13    		 GO:0004482 ... P03314 19101564 PDBbind: -logKd/Ki=6.91, Kd=124nM
    13467 3evd:A (1.5) BS02 GTP 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13    		 GO:0004482 ... P03314 19101564 PDBbind: -logKd/Ki=6.91, Kd=124nM
    13468 3evf:A (1.45) BS01 GTA 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13    		 GO:0004482 ... P03314 19101564 PDBbind: -logKd/Ki=6.77, Ki=170nM
    13469 3evf:A (1.45) BS02 GTA 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13    		 GO:0004482 ... P03314 19101564 PDBbind: -logKd/Ki=6.77, Ki=170nM
    13470 3ew2:A (2.3) BS01 BTN ? GO:0005576 ... Q8KKW2 19111749 PDBbind: -logKd/Ki=6.67, Kd=215nM
    13471 3ew2:B (2.3) BS01 BTN ? GO:0005576 ... Q8KKW2 19111749 PDBbind: -logKd/Ki=6.67, Kd=215nM
    13472 3ewc:A (2.11) BS02 MCF 3.5.4.31
    3.5.4.4    		 GO:0004000 ... A5KE01 19728741 MOAD: Ki=20nM
    PDBbind: -logKd/Ki=7.70, Ki=20nM
    13473 3ewd:A (1.9) BS02 MCF 3.5.4.31
    3.5.4.4    		 GO:0004000 ... A5KE01 19728741 MOAD: Ki=4100nM
    13474 3ewh:A (1.6) BS01 K11 2.7.10.1 GO:0004672 ... P35968 19062275 MOAD: ic50=69nM
    PDBbind: -logKd/Ki=7.16, IC50=69nM
    BindingDB: IC50=70nM
    13475 3ewj:B (1.8) BS02 642 3.4.24.86 GO:0004222 ... P78536 19054672 MOAD: Ki=143nM
    13476 3ewu:A (1.6) BS01 UEP 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 19472232 PDBbind: -logKd/Ki=4.62, IC50=24uM
    13477 3ewu:A (1.6) BS02 UEP 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 19472232 PDBbind: -logKd/Ki=4.62, IC50=24uM
    13478 3ewu:B (1.6) BS01 UEP 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 19472232 PDBbind: -logKd/Ki=4.62, IC50=24uM
    13479 3ewu:B (1.6) BS02 UEP 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 19472232 PDBbind: -logKd/Ki=4.62, IC50=24uM
    13480 3ewz:A (1.4) BS01 CNU 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 19472232 PDBbind: -logKd/Ki=4.10, IC50=79uM
    13481 3ewz:A (1.4) BS02 CNU 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 19472232 PDBbind: -logKd/Ki=4.10, IC50=79uM
    13482 3ewz:B (1.4) BS01 CNU 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 19472232 MOAD: ic50=79uM
    PDBbind: -logKd/Ki=4.10, IC50=79uM
    13483 3ewz:B (1.4) BS02 CNU 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 19472232 MOAD: ic50=79uM
    PDBbind: -logKd/Ki=4.10, IC50=79uM
    13484 3ex2:A (1.55) BS01 6CN 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 19472232 MOAD: ic50~200uM
    PDBbind: -logKd/Ki=3.70, IC50=200uM
    13485 3ex2:A (1.55) BS02 6CN 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 19472232 MOAD: ic50~200uM
    PDBbind: -logKd/Ki=3.70, IC50=200uM
    13486 3ex2:B (1.55) BS01 6CN 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 19472232 MOAD: ic50~200uM
    PDBbind: -logKd/Ki=3.70, IC50=200uM
    13487 3ex2:B (1.55) BS02 6CN 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 19472232 MOAD: ic50~200uM
    PDBbind: -logKd/Ki=3.70, IC50=200uM
    13488 3ex3:A (1.45) BS01 U5P 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 19472232 PDBbind: -logKd/Ki=4.44, IC50=36uM
    13489 3ex3:A (1.45) BS02 U5P 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 19472232 PDBbind: -logKd/Ki=4.44, IC50=36uM
    13490 3ex3:B (1.45) BS01 U5P 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 19472232 PDBbind: -logKd/Ki=4.44, IC50=36uM
    13491 3ex3:B (1.45) BS02 U5P 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 19472232 PDBbind: -logKd/Ki=4.44, IC50=36uM
    13492 3ex6:A (1.3) BS01 U5P 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 19472232 PDBbind: -logKd/Ki=3.66, Ki=220uM
    13493 3ex6:B (1.3) BS01 U5P 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 19472232 PDBbind: -logKd/Ki=3.66, Ki=220uM
    13494 3exf:A (2.998) BS02 TPP 1.2.4.1 GO:0004738 ... P08559 19081061 PDBbind: -logKd/Ki=6.54, Kd=0.29uM
    13495 3exf:B (2.998) BS01 TPP 1.2.4.1 GO:0003824 ... P11177 19081061 PDBbind: -logKd/Ki=6.54, Kd=0.29uM
    13496 3exf:D (2.998) BS01 TPP 1.2.4.1 GO:0003824 ... P11177 19081061 PDBbind: -logKd/Ki=6.54, Kd=0.29uM
    13497 3exh:A (2.444) BS02 TPP 1.2.4.1 GO:0004738 ... P08559 19081061 PDBbind: -logKd/Ki=4.88, Kd=13.1uM
    13498 3exh:B (2.444) BS01 TPP 1.2.4.1 GO:0003824 ... P11177 19081061 PDBbind: -logKd/Ki=4.88, Kd=13.1uM
    13499 3exh:D (2.444) BS01 TPP 1.2.4.1 GO:0003824 ... P11177 19081061 PDBbind: -logKd/Ki=4.88, Kd=13.1uM
    13500 3exo:A (2.1) BS01 5MS 3.4.23.46 GO:0004190 ... P56817 19036583 MOAD: ic50=24uM
    PDBbind: -logKd/Ki=4.62, IC50=24uM
    BindingDB: IC50=24000nM
    13501 3ey4:A (3.0) BS02 352 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 N/A BindingDB: Ki=35nM, IC50=34nM
    13502 3ey4:B (3.0) BS02 352 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 N/A BindingDB: Ki=35nM, IC50=34nM
    13503 3ey4:C (3.0) BS02 352 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 N/A BindingDB: Ki=35nM, IC50=34nM
    13504 3ey4:D (3.0) BS02 352 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 N/A BindingDB: Ki=35nM, IC50=34nM
    13505 3eyd:A (2.3) BS04 BE8 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0006508 ... P26664 19022670 PDBbind: -logKd/Ki=9.70, Ki=0.2nM
    13506 3eyg:A (1.9) BS01 MI1 2.7.10.2 GO:0004672 ... P23458 19361440 MOAD: ic50=1.6nM
    PDBbind: -logKd/Ki=8.80, IC50=1.6nM
    BindingDB: IC50=15nM, EC50=53nM, Kd=>10000nM, Ki=0.700000nM
    13507 3eyh:A (2.0) BS01 IZA 2.7.10.2 GO:0004672 ... P23458 19361440 MOAD: ic50=20nM
    PDBbind: -logKd/Ki=7.70, IC50=20nM
    BindingDB: IC50=5.2nM
    13508 3eyl:A (3.0) BS02 SMK 2.3.2.27 N/A P98170 18992220 PDBbind: -logKd/Ki=6.60, IC50=250nM
    BindingDB: IC50=86nM
    13509 3eyl:B (3.0) BS02 SMK 2.3.2.27 N/A P98170 18992220 BindingDB: IC50=86nM
    13510 3ezr:A (1.9) BS01 EZR 2.7.11.22 GO:0000082 ... P24941 19097791 PDBbind: -logKd/Ki=5.00, IC50=10uM
    BindingDB: IC50=10000nM
    13511 3ezr:A (1.9) BS02 EZR 2.7.11.22 GO:0000082 ... P24941 19097791 PDBbind: -logKd/Ki=5.00, IC50=10uM
    BindingDB: IC50=10000nM
    13512 3ezv:A (1.99) BS01 EZV 2.7.11.22 GO:0000082 ... P24941 19097791 PDBbind: -logKd/Ki=5.98, IC50=1.04uM
    13513 3f07:A (3.3) BS03 AGE 3.5.1.-
    3.5.1.98    		 GO:0000118 ... Q9BY41 19053282 PDBbind: -logKd/Ki=5.54, IC50=2.9uM
    13514 3f0b:X (2.1) BS02 53R N/A GO:0004146 ... N/A 19249312 MOAD: ic50=0.061uM
    13515 3f0q:X (2.08) BS02 52V N/A GO:0004146 ... N/A 20643959 MOAD: Ki=10nM
    13516 3f0r:A (2.54) BS02 TSN 3.5.1.-
    3.5.1.98    		 GO:0000118 ... Q9BY41 19053282 PDBbind: -logKd/Ki=6.89, Ki=130nM
    BindingDB: IC50=90nM, Ki=45nM, Kd=3.9e+2nM
    13517 3f0r:A (2.54) BS03 TSN 3.5.1.-
    3.5.1.98    		 GO:0000118 ... Q9BY41 19053282 PDBbind: -logKd/Ki=6.89, Ki=130nM
    BindingDB: IC50=90nM, Ki=45nM, Kd=3.9e+2nM
    13518 3f0r:B (2.54) BS02 TSN 3.5.1.-
    3.5.1.98    		 GO:0000118 ... Q9BY41 19053282 BindingDB: IC50=90nM, Ki=45nM, Kd=3.9e+2nM
    13519 3f0r:B (2.54) BS03 TSN 3.5.1.-
    3.5.1.98    		 GO:0000118 ... Q9BY41 19053282 BindingDB: IC50=90nM, Ki=45nM, Kd=3.9e+2nM
    13520 3f0r:C (2.54) BS02 TSN 3.5.1.-
    3.5.1.98    		 GO:0000118 ... Q9BY41 19053282 BindingDB: IC50=90nM, Ki=45nM, Kd=3.9e+2nM
    13521 3f0r:C (2.54) BS03 TSN 3.5.1.-
    3.5.1.98    		 GO:0000118 ... Q9BY41 19053282 BindingDB: IC50=90nM, Ki=45nM, Kd=3.9e+2nM
    13522 3f0u:X (1.6) BS02 53R N/A GO:0004146 ... N/A 19249312 MOAD: ic50=0.19uM
    13523 3f15:A (1.7) BS06 HS1 3.4.24.65 GO:0004222 ... P39900 17269766 MOAD: Kd=7.88nM
    PDBbind: -logKd/Ki=8.10, Kd=7.88nM
    13524 3f16:A (1.16) BS06 HS3 3.4.24.65 GO:0004222 ... P39900 17269766 MOAD: Kd=5.91nM
    PDBbind: -logKd/Ki=8.23, Kd=5.91nM
    13525 3f17:A (1.1) BS06 HS4 3.4.24.65 GO:0004222 ... P39900 17269766 MOAD: Kd=2.36nM
    PDBbind: -logKd/Ki=8.63, Kd=2.36nM
    BindingDB: Ki=2.0nM
    13526 3f18:A (1.13) BS06 HS5 3.4.24.65 GO:0004222 ... P39900 17269766 MOAD: Kd=39.5nM
    PDBbind: -logKd/Ki=7.40, Kd=39.5nM
    13527 3f19:A (1.13) BS06 HS6 3.4.24.65 GO:0004222 ... P39900 17269766 MOAD: Kd=65.1nM
    PDBbind: -logKd/Ki=7.19, Kd=65.1nM
    13528 3f1a:A (1.25) BS06 HS7 3.4.24.65 GO:0004222 ... P39900 17269766 MOAD: Kd=61.1nM
    PDBbind: -logKd/Ki=7.21, Kd=61.1nM
    13529 3f1q:A (2.0) BS02 BCE 1.3.5.2 GO:0004151 ... Q02127 19351152 MOAD: ic50=0.117uM
    13530 3f27:D (2.75) BS01 dna ? N/A Q61473 19328208 PDBbind: Kd=2.6nM
    13531 3f27:D (2.75) BS02 dna ? N/A Q61473 19328208 PDBbind: Kd=2.6nM
    13532 3f2a:A (1.9) BS01 985 2.7.11.1 GO:0004672 ... P11309 19256503 MOAD: ic50=57nM
    PDBbind: -logKd/Ki=7.24, IC50=57nM
    BindingDB: IC50=57nM
    13533 3f33:A (1.7) BS01 PFL ? GO:0005506 ... P02791 19605349 MOAD: Kd=0.46mM
    PDBbind: -logKd/Ki=3.34, Kd=0.46mM
    13534 3f34:A (1.68) BS01 DIE ? GO:0005506 ... P02791 19605349 MOAD: Kd=0.69mM
    PDBbind: -logKd/Ki=3.16, Kd=0.69mM
    13535 3f35:A (1.92) BS01 DIE ? GO:0005506 ... P02791 19605349 MOAD: Kd=0.69mM
    PDBbind: -logKd/Ki=3.16, Kd=0.69mM
    13536 3f36:A (1.7) BS01 IP0 ? GO:0005506 ... P02791 19605349 MOAD: Kd=1.3mM
    PDBbind: -logKd/Ki=2.89, Kd=1.3mM
    13537 3f37:A (1.54) BS01 2MY ? GO:0005506 ... P02791 19605349 MOAD: Kd=2.4mM
    PDBbind: -logKd/Ki=2.62, Kd=2.4mM
    13538 3f38:A (1.75) BS01 2MY ? GO:0005506 ... P02791 19605349 MOAD: Kd=2.4mM
    PDBbind: -logKd/Ki=2.62, Kd=2.4mM
    13539 3f3a:A (2.0) BS01 TRP ? GO:0005886 ... O67854 19074341 MOAD: Ki=64800nM
    PDBbind: -logKd/Ki=4.19, Ki=64.8uM
    13540 3f3a:A (2.0) BS02 TRP ? GO:0005886 ... O67854 19074341 MOAD: Ki=64800nM
    PDBbind: -logKd/Ki=4.19, Ki=64.8uM
    13541 3f3a:A (2.0) BS03 TRP ? GO:0005886 ... O67854 19074341 MOAD: Ki=64800nM
    PDBbind: -logKd/Ki=4.19, Ki=64.8uM
    13542 3f3a:A (2.0) BS04 TRP ? GO:0005886 ... O67854 19074341 MOAD: Ki=64800nM
    PDBbind: -logKd/Ki=4.19, Ki=64.8uM
    13543 3f3c:A (2.1) BS01 PFF ? GO:0005886 ... O67854 19074341 MOAD: Ki=950nM
    PDBbind: -logKd/Ki=6.02, Ki=950nM
    13544 3f3d:A (2.3) BS03 MET ? GO:0005886 ... O67854 19074341 MOAD: Kd=69nM
    PDBbind: -logKd/Ki=7.16, Kd=69nM
    13545 3f3e:A (1.8) BS01 LEU ? GO:0005886 ... O67854 19074341 MOAD: Kd=20nM
    PDBbind: -logKd/Ki=7.70, Kd=20nM
    13546 3f3t:A (2.5) BS01 1AU 2.7.10.2 GO:0004672 ... P00523 19396179 MOAD: Kd=26uM
    PDBbind: -logKd/Ki=4.59, Kd=26uM
    BindingDB: IC50=6.41e+4nM
    13547 3f3t:A (2.5) BS02 1AU 2.7.10.2 GO:0004672 ... P00523 19396179 MOAD: Kd=26uM
    PDBbind: -logKd/Ki=4.59, Kd=26uM
    BindingDB: IC50=6.41e+4nM
    13548 3f3u:A (2.5) BS01 1AW 2.7.10.2 GO:0004672 ... P00523 19396179 MOAD: Kd=18uM
    PDBbind: -logKd/Ki=4.74, Kd=18uM
    13549 3f3u:A (2.5) BS02 1AW 2.7.10.2 GO:0004672 ... P00523 19396179 MOAD: Kd=18uM
    PDBbind: -logKd/Ki=4.74, Kd=18uM
    13550 3f3u:B (2.5) BS01 1AW 2.7.10.2 GO:0004672 ... P00523 19396179 MOAD: Kd=18uM
    13551 3f3v:A (2.6) BS01 1BU 2.7.10.2 GO:0004672 ... P00523 19462975 PDBbind: -logKd/Ki=7.14, Kd=73nM
    BindingDB: IC50=21nM, Kd=73nM
    13552 3f3v:B (2.6) BS01 1BU 2.7.10.2 GO:0004672 ... P00523 19462975 BindingDB: IC50=21nM, Kd=73nM
    13553 3f3w:A (2.6) BS01 1BU 2.7.10.2 GO:0004672 ... P00523 19462975 PDBbind: -logKd/Ki=7.47, IC50=34nM
    BindingDB: IC50=21nM, Kd=73nM
    13554 3f3w:B (2.6) BS01 1BU 2.7.10.2 GO:0004672 ... P00523 19462975 BindingDB: IC50=21nM, Kd=73nM
    13555 3f48:A (1.9) BS03 ALA ? GO:0005886 ... O67854 19074341 MOAD: Kd=512nM
    PDBbind: -logKd/Ki=6.29, Kd=512nM
    13556 3f4j:A (2.15) BS01 GLY ? GO:0005886 ... O67854 19074341 MOAD: Ki=322000nM
    13557 3f4x:A (1.9) BS02 KLT 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19115843 MOAD: Ki=138nM
    BindingDB: Ki=138nM
    13558 3f5p:A (2.9) BS01 741 2.7.10.1 GO:0004672 ... P08069 19041240 PDBbind: -logKd/Ki=6.85, IC50=0.140uM
    BindingDB: IC50=140nM
    13559 3f5p:B (2.9) BS01 741 2.7.10.1 GO:0004672 ... P08069 19041240 BindingDB: IC50=140nM
    13560 3f5p:C (2.9) BS01 741 2.7.10.1 GO:0004672 ... P08069 19041240 BindingDB: IC50=140nM
    13561 3f5p:D (2.9) BS01 741 2.7.10.1 GO:0004672 ... P08069 19041240 BindingDB: IC50=140nM
    13562 3f5p:E (2.9) BS01 741 2.7.10.1 GO:0004672 ... P08069 19041240 BindingDB: IC50=140nM
    13563 3f5p:F (2.9) BS01 741 2.7.10.1 GO:0004672 ... P08069 19041240 BindingDB: IC50=140nM
    13564 3f5p:G (2.9) BS01 741 2.7.10.1 GO:0004672 ... P08069 19041240 BindingDB: IC50=140nM
    13565 3f5p:H (2.9) BS01 741 2.7.10.1 GO:0004672 ... P08069 19041240 BindingDB: IC50=140nM
    13566 3f5p:I (2.9) BS01 741 2.7.10.1 GO:0004672 ... P08069 19041240 BindingDB: IC50=140nM
    13567 3f5p:J (2.9) BS01 741 2.7.10.1 GO:0004672 ... P08069 19041240 BindingDB: IC50=140nM
    13568 3f5p:K (2.9) BS01 741 2.7.10.1 GO:0004672 ... P08069 19041240 BindingDB: IC50=140nM
    13569 3f5p:L (2.9) BS01 741 2.7.10.1 GO:0004672 ... P08069 19041240 BindingDB: IC50=140nM
    13570 3f5p:M (2.9) BS01 741 2.7.10.1 GO:0004672 ... P08069 19041240 BindingDB: IC50=140nM
    13571 3f5p:R (2.9) BS01 741 2.7.10.1 GO:0004672 ... P08069 19041240 BindingDB: IC50=140nM
    13572 3f5p:S (2.9) BS01 741 2.7.10.1 GO:0004672 ... P08069 19041240 BindingDB: IC50=140nM
    13573 3f5p:T (2.9) BS01 741 2.7.10.1 GO:0004672 ... P08069 19041240 BindingDB: IC50=140nM
    13574 3f5x:A (2.4) BS01 EZV 2.7.11.22 GO:0000082 ... P24941 19097791 MOAD: ic50=1040nM
    13575 3f5x:C (2.4) BS01 EZV 2.7.11.22 GO:0000082 ... P24941 19097791 MOAD: ic50=1040nM
    13576 3f66:A (1.4) BS01 IHX 2.7.10.1 GO:0004672 ... P08581 19059779 MOAD: ic50=0.9uM
    PDBbind: -logKd/Ki=6.05, IC50=0.9uM
    BindingDB: IC50=900nM
    13577 3f66:B (1.4) BS01 IHX 2.7.10.1 GO:0004672 ... P08581 19059779 MOAD: ic50=0.9uM
    BindingDB: IC50=900nM
    13578 3f68:H (1.75) BS03 91U 3.4.21.5 GO:0004252 ... P00734 19520086 MOAD: Ki=8.7uM
    PDBbind: -logKd/Ki=5.06, Ki=8.7uM
    13579 3f69:A (2.8) BS01 XDR 2.7.11.1 GO:0004672 ... P9WI81 19008858 PDBbind: -logKd/Ki=6.00, IC50=1uM
    13580 3f69:B (2.8) BS01 XDR 2.7.11.1 GO:0004672 ... P9WI81 19008858 PDBbind: -logKd/Ki=6.00, IC50=1uM
    13581 3f6e:X (1.34) BS01 8PA 4.1.1.7 GO:0000287 ... P20906 19140682 PDBbind: -logKd/Ki=2.38, Kd=4.14mM
    13582 3f6g:A (2.0) BS01 ILE 2.3.3.21 GO:0003852 ... Q8F3Q1 19351325 PDBbind: -logKd/Ki=4.72, Ki=19uM
    13583 3f6g:A (2.0) BS02 ILE 2.3.3.21 GO:0003852 ... Q8F3Q1 19351325 PDBbind: -logKd/Ki=4.72, Ki=19uM
    13584 3f6g:B (2.0) BS01 ILE 2.3.3.21 GO:0003852 ... Q8F3Q1 19351325 PDBbind: -logKd/Ki=4.72, Ki=19uM
    13585 3f6g:B (2.0) BS02 ILE 2.3.3.21 GO:0003852 ... Q8F3Q1 19351325 PDBbind: -logKd/Ki=4.72, Ki=19uM
    13586 3f6h:A (2.7) BS01 ILE 2.3.3.21 GO:0003852 ... Q8F3Q1 19351325 PDBbind: -logKd/Ki=4.72, Ki=19uM
    13587 3f70:A (2.1) BS01 MLZ ? GO:0005634 ... Q969R5 19233876 MOAD: Kd=14uM
    PDBbind: -logKd/Ki=4.85, Kd=14uM
    13588 3f70:B (2.1) BS01 MLZ ? GO:0005634 ... Q969R5 19233876 MOAD: Kd=14uM
    13589 3f78:A (1.6) BS01 ICF ? N/A P20701 19332643 PDBbind: -logKd/Ki=3.10, Kd=800uM
    13590 3f7b:A (2.05) BS02 AG5 4.2.1.1 GO:0004089 ... P22748 20363633 MOAD: ic50=64nM
    PDBbind: -logKd/Ki=7.19, IC50=64nM
    BindingDB: IC50=64nM
    13591 3f7b:B (2.05) BS02 AG5 4.2.1.1 GO:0004089 ... P22748 20363633 MOAD: ic50=64nM
    BindingDB: IC50=64nM
    13592 3f7g:E (2.3) BS01 389 2.3.2.27 N/A Q96CA5 19228017 PDBbind: -logKd/Ki=7.37, Ki=43nM
    13593 3f7h:A (1.8) BS02 419 2.3.2.27 N/A Q96CA5 19228017 PDBbind: -logKd/Ki=7.09, Ki=82nM
    13594 3f7i:A (1.9) BS02 G13 2.3.2.27 N/A Q96CA5 19228017 PDBbind: -logKd/Ki=7.34, Ki=46nM
    13595 3f7u:A (2.0) BS02 AG4 4.2.1.1 GO:0004089 ... P22748 20363633 MOAD: ic50=246nM
    PDBbind: -logKd/Ki=6.61, IC50=246nM
    BindingDB: IC50=246nM
    13596 3f7u:B (2.0) BS02 AG4 4.2.1.1 GO:0004089 ... P22748 20363633 MOAD: ic50=246nM
    BindingDB: IC50=246nM
    13597 3f7u:C (2.0) BS02 AG4 4.2.1.1 GO:0004089 ... P22748 20363633 MOAD: ic50=246nM
    BindingDB: IC50=246nM
    13598 3f7u:D (2.0) BS02 AG4 4.2.1.1 GO:0004089 ... P22748 20363633 MOAD: ic50=246nM
    BindingDB: IC50=246nM
    13599 3f7z:A (2.4) BS01 34O 2.7.11.1
    2.7.11.26    		 GO:0004672 ... P49841 19200745 MOAD: ic50=65nM
    PDBbind: -logKd/Ki=7.19, IC50=65nM
    BindingDB: IC50=65nM
    13600 3f7z:B (2.4) BS01 34O 2.7.11.1
    2.7.11.26    		 GO:0004672 ... P49841 19200745 MOAD: ic50=65nM
    BindingDB: IC50=65nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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