Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    9401 2qnz:B (2.3) BS01 DFD 2.3.1.301 GO:0000062 ... P9WNG3 18420147 PDBbind: -logKd/Ki=5.42, IC50=3.8uM
    9402 2qo1:A (2.6) BS01 VZZ 2.3.1.301 GO:0000062 ... P9WNG3 18420147 PDBbind: -logKd/Ki=5.57, IC50=2.7uM
    9403 2qo8:A (1.4) BS02 3CC 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 18161740 MOAD: Ki=3.4nM
    PDBbind: -logKd/Ki=8.47, Ki=3.4nM
    BindingDB: Ki=0.9nM
    9404 2qoa:A (1.6) BS02 MAJ 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 18161740 MOAD: Ki=52nM
    PDBbind: -logKd/Ki=7.28, Ki=52nM
    BindingDB: Ki=52nM
    9405 2qoa:A (1.6) BS03 MAJ 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 18161740 MOAD: Ki=52nM
    PDBbind: -logKd/Ki=7.28, Ki=52nM
    BindingDB: Ki=52nM
    9406 2qoe:A (2.3) BS01 448 3.4.14.5 GO:0001618 ... P27487 17827003 MOAD: ic50=25nM
    PDBbind: -logKd/Ki=7.60, IC50=25nM
    BindingDB: IC50=25nM
    9407 2qoe:B (2.3) BS01 448 3.4.14.5 GO:0001618 ... P27487 17827003 MOAD: ic50=25nM
    BindingDB: IC50=25nM
    9408 2qoh:A (1.95) BS01 P3Y 2.7.10.2 GO:0004672 ... P00520 17718712 PDBbind: -logKd/Ki=7.70, IC50=20nM
    9409 2qp6:A (1.45) BS02 MB1 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 18481843 MOAD: Ki=208nM
    PDBbind: -logKd/Ki=6.68, Ki=208nM
    9410 2qp8:A (1.5) BS01 SC7 3.4.23.46 GO:0004190 ... P56817 18023580 MOAD: ic50=8nM
    PDBbind: -logKd/Ki=8.10, IC50=8nM
    BindingDB: IC50=106nM
    9411 2qp8:B (1.5) BS01 SC7 3.4.23.46 GO:0004190 ... P56817 18023580 MOAD: ic50=8nM
    BindingDB: IC50=106nM
    9412 2qpj:A (2.05) BS02 I20 3.4.24.11 GO:0001786 ... P08473 17704566 PDBbind: -logKd/Ki=6.35, IC50=0.45uM
    9413 2qpk:A (2.34) BS03 SHA 1.11.1.7 GO:0004601 ... P80025 27986533 BindingDB: IC50=4.0e+2nM
    9414 2qpl:A (2.1) BS01 BTY 2.4.2.1 GO:0003824 ... P55859 17927987 MOAD: ic50=18.9uM
    9415 2qpm:A (1.85) BS02 246 1.5.99.12 GO:0003824 ... Q9T0N8 20478354 MOAD: ic50=42uM
    9416 2qpu:A (1.7) BS04 QPU 3.2.1.1 GO:0004556 ... P00693 17803687 PDBbind: -logKd/Ki=3.60, Kd=0.25mM
    9417 2qpu:A (1.7) BS05 QPU 3.2.1.1 GO:0004556 ... P00693 17803687 PDBbind: -logKd/Ki=3.60, Kd=0.25mM
    9418 2qpy:A (2.5) BS02 DHT ? N/A P19091 17911242 BindingDB: EC50=3.98nM, IC50=1.000000nM
    9419 2qq7:A (2.38) BS01 SR2 2.7.10.2 GO:0004672 ... P00523 18316192 PDBbind: -logKd/Ki=5.24, IC50=5.71uM
    BindingDB: IC50=>27000nM
    9420 2qq7:B (2.38) BS01 SR2 2.7.10.2 GO:0004672 ... P00523 18316192 BindingDB: IC50=>27000nM
    9421 2qqg:A (2.05) BS04 NCA 2.3.1.286 GO:0017136 ... P53686 17289592 BindingDB: IC50=91000nM
    9422 2qrg:A (1.85) BS01 M07 2.4.1.1 GO:0000166 ... P00489 19781947 MOAD: Ki=6.6uM
    PDBbind: -logKd/Ki=5.18, Ki=6.6uM
    BindingDB: Ki=6600nM
    9423 2qrh:A (1.83) BS01 M08 2.4.1.1 GO:0000166 ... P00489 19781947 MOAD: Ki=19.6uM
    PDBbind: -logKd/Ki=4.71, Ki=19.6uM
    BindingDB: Ki=19600nM
    9424 2qrk:A (1.75) BS01 AMP 1.5.1.7 GO:0003729 ... P38998 17939687 MOAD: Ki=55uM
    PDBbind: -logKd/Ki=4.26, Ki=55uM
    9425 2qrm:A (1.9) BS01 M09 2.4.1.1 GO:0000166 ... P00489 19781947 MOAD: Ki=92.5uM
    PDBbind: -logKd/Ki=4.03, Ki=92.5uM
    9426 2qrp:A (1.86) BS01 S06 2.4.1.1 GO:0000166 ... P00489 19781947 MOAD: Ki=0.63uM
    PDBbind: -logKd/Ki=6.20, Ki=0.63uM
    9427 2qrq:A (1.8) BS01 S13 2.4.1.1 GO:0000166 ... P00489 19781947 MOAD: Ki=7.9uM
    PDBbind: -logKd/Ki=5.10, Ki=7.9uM
    9428 2qrv:A (2.89) BS01 SAH 2.1.1.-
    2.1.1.37    		 GO:0008168 ... Q9Y6K1 17713477 BindingDB: IC50=>50000nM
    9429 2qrv:D (2.89) BS01 SAH 2.1.1.-
    2.1.1.37    		 GO:0008168 ... Q9Y6K1 17713477 BindingDB: IC50=>50000nM
    9430 2qrv:E (2.89) BS01 SAH 2.1.1.-
    2.1.1.37    		 GO:0008168 ... Q9Y6K1 17713477 BindingDB: IC50=>50000nM
    9431 2qrv:H (2.89) BS01 SAH 2.1.1.-
    2.1.1.37    		 GO:0008168 ... Q9Y6K1 17713477 BindingDB: IC50=>50000nM
    9432 2qry:A (2.25) BS01 TPS ? GO:0015888 ... P31550 18177053 MOAD: Kd=2.3nM
    PDBbind: -logKd/Ki=8.64, Kd=2.3nM
    BindingDB: Kd=2.3nM
    9433 2qry:B (2.25) BS01 TPS ? GO:0015888 ... P31550 18177053 MOAD: Kd=2.3nM
    BindingDB: Kd=2.3nM
    9434 2qry:C (2.25) BS01 TPS ? GO:0015888 ... P31550 18177053 MOAD: Kd=2.3nM
    BindingDB: Kd=2.3nM
    9435 2qry:D (2.25) BS01 TPS ? GO:0015888 ... P31550 18177053 MOAD: Kd=2.3nM
    BindingDB: Kd=2.3nM
    9436 2qs1:A (1.8) BS01 UB1 ? GO:0015276 ... P22756 20558186 MOAD: Kd=33nM
    BindingDB: Kd=10nM
    9437 2qs1:B (1.8) BS01 UB1 ? GO:0015276 ... P22756 20558186 MOAD: Kd=33nM
    BindingDB: Kd=10nM
    9438 2qs2:A (1.8) BS01 UBF ? GO:0015276 ... P22756 20558186 MOAD: Kd=186nM
    BindingDB: Kd=25nM
    9439 2qs2:B (1.8) BS01 UBF ? GO:0015276 ... P22756 20558186 MOAD: Kd=186nM
    BindingDB: Kd=25nM
    9440 2qs3:A (1.76) BS01 UBE ? GO:0015276 ... P22756 18789344 MOAD: Kd=1.4nM
    BindingDB: Kd=12nM
    9441 2qs3:B (1.76) BS01 UBE ? GO:0015276 ... P22756 18789344 MOAD: Kd=1.4nM
    BindingDB: Kd=12nM
    9442 2qs4:A (1.58) BS01 LY5 ? GO:0015276 ... P22756 20558186 MOAD: Kd=38nM
    9443 2qs4:B (1.58) BS01 LY5 ? GO:0015276 ... P22756 20558186 MOAD: Kd=38nM
    9444 2qs4:C (1.58) BS01 LY5 ? GO:0015276 ... P22756 20558186 MOAD: Kd=38nM
    9445 2qs4:D (1.58) BS01 LY5 ? GO:0015276 ... P22756 20558186 MOAD: Kd=38nM
    9446 2qt9:A (2.1) BS01 524 3.4.14.5 GO:0001618 ... P27487 17851076 MOAD: ic50=0.0023uM
    PDBbind: -logKd/Ki=8.64, IC50=2.3nM
    BindingDB: IC50=2.3nM
    9447 2qt9:B (2.1) BS01 524 3.4.14.5 GO:0001618 ... P27487 17851076 MOAD: ic50=0.0023uM
    BindingDB: IC50=2.3nM
    9448 2qtb:A (2.25) BS01 474 3.4.14.5 GO:0001618 ... P27487 17851076 MOAD: ic50=4.8nM
    PDBbind: -logKd/Ki=8.32, IC50=4.8nM
    BindingDB: IC50=4.8nM
    9449 2qtb:B (2.25) BS01 474 3.4.14.5 GO:0001618 ... P27487 17851076 MOAD: ic50=4.8nM
    BindingDB: IC50=4.8nM
    9450 2qtg:A (1.84) BS01 MTH 3.2.2.16 GO:0000003 ... Q9T0I8 18342331 MOAD: Ki=8.3uM
    PDBbind: -logKd/Ki=5.08, Ki=8.3uM
    9451 2qtg:B (1.84) BS01 MTH 3.2.2.16 GO:0000003 ... Q9T0I8 18342331 MOAD: Ki=8.3uM
    PDBbind: -logKd/Ki=5.08, Ki=8.3uM
    9452 2qtn:B (2.4) BS01 NCN N/A GO:0003824 ... N/A 18977360 PDBbind: -logKd/Ki=3.42, Kd=382uM
    9453 2qtr:A (1.7) BS01 DND 2.7.7.18 GO:0003824 ... C3L5T6 18977360 MOAD: Kd=3.2uM
    9454 2qtr:B (1.7) BS01 DND 2.7.7.18 GO:0003824 ... C3L5T6 18977360 MOAD: Kd=3.2uM
    9455 2qtr:C (1.7) BS01 DND 2.7.7.18 GO:0003824 ... C3L5T6 18977360 MOAD: Kd=3.2uM
    9456 2qtt:B (1.93) BS01 FMC 3.2.2.16 GO:0000003 ... Q9T0I8 18342331 MOAD: Ki=48uM
    PDBbind: -logKd/Ki=4.32, Ki=48uM
    9457 2qtu:A (2.53) BS01 3AS ? GO:0003677 ... Q92731 17804226 PDBbind: -logKd/Ki=9.28, Ki=0.53nM
    BindingDB: Ki=0.53nM
    9458 2qtu:B (2.53) BS01 3AS ? GO:0003677 ... Q92731 17804226 BindingDB: Ki=0.53nM
    9459 2qtz:A (1.9) BS02 NAP 1.16.1.8 GO:0016491 ... Q9UBK8 17892308 MOAD: Kd=35.1uM
    9460 2qu2:A (2.6) BS01 251 3.4.23.46 GO:0004190 ... P56817 17761418 PDBbind: -logKd/Ki=5.43, IC50=3.7uM
    BindingDB: IC50=3700nM
    9461 2qu3:A (2.0) BS01 462 3.4.23.46 GO:0004190 ... P56817 17761418 MOAD: ic50=0.59uM
    PDBbind: -logKd/Ki=6.23, IC50=0.59uM
    BindingDB: IC50=590nM
    9462 2qu5:A (2.95) BS01 276 2.7.10.1 GO:0004672 ... P35968 17696416 PDBbind: -logKd/Ki=8.06, Ki=8.7nM
    BindingDB: Ki=9nM
    9463 2qu6:A (2.1) BS01 857 2.7.10.1 GO:0004672 ... P35968 17696416 MOAD: Ki=3nM
    PDBbind: -logKd/Ki=8.52, Ki=3nM
    BindingDB: IC50=4.6nM, Ki=2.8nM
    9464 2qu6:B (2.1) BS01 857 2.7.10.1 GO:0004672 ... P35968 17696416 MOAD: Ki=3nM
    BindingDB: IC50=4.6nM, Ki=2.8nM
    9465 2qv7:A (2.3) BS02 ADP 2.7.1.107 GO:0004143 ... Q6GFF9 18611377 PDBbind: -logKd/Ki=3.66, Kd=219uM
    9466 2qvd:A (1.93) BS01 BER 3.1.1.4 GO:0004623 ... P59071 21420512 MOAD: Kd=0.000000064M
    9467 2qve:A (2.0) BS01 247 4.3.1.23
    5.4.3.6    		 GO:0003824 ... Q8GMG0 18078753 PDBbind: -logKd/Ki=2.32, IC50=4.8mM
    9468 2qve:A (2.0) BS02 247 4.3.1.23
    5.4.3.6    		 GO:0003824 ... Q8GMG0 18078753 PDBbind: -logKd/Ki=2.32, IC50=4.8mM
    9469 2qve:B (2.0) BS01 247 4.3.1.23
    5.4.3.6    		 GO:0003824 ... Q8GMG0 18078753 PDBbind: -logKd/Ki=2.32, IC50=4.8mM
    9470 2qve:B (2.0) BS02 247 4.3.1.23
    5.4.3.6    		 GO:0003824 ... Q8GMG0 18078753 PDBbind: -logKd/Ki=2.32, IC50=4.8mM
    9471 2qvu:A (1.5) BS01 FDP 3.1.3.11 GO:0005737 ... P00636 17933867 MOAD: Kd=0.36uM
    9472 2qvu:B (1.5) BS01 FDP 3.1.3.11 GO:0005737 ... P00636 17933867 MOAD: Kd=0.36uM
    9473 2qw1:A (1.7) BS01 3MG ? GO:0005509 ... P0AEE5 19348466 MOAD: Ki=125uM
    PDBbind: -logKd/Ki=3.90, Ki=125uM
    9474 2qwb:A (2.0) BS01 SIA 3.2.1.18 GO:0004308 ... P03472 9655825 MOAD: Ki=1820uM
    PDBbind: -logKd/Ki=2.74, Ki=1820uM
    9475 2qwb:A (2.0) BS02 SIA 3.2.1.18 GO:0004308 ... P03472 9655825 MOAD: Ki=1820uM
    PDBbind: -logKd/Ki=2.74, Ki=1820uM
    9476 2qwc:A (1.6) BS02 DAN 3.2.1.18 GO:0004308 ... P03472 9655825 MOAD: Ki=280uM
    PDBbind: -logKd/Ki=3.55, Ki=280uM
    BindingDB: IC50=13000nM
    9477 2qwd:A (2.0) BS02 4AM 3.2.1.18 GO:0004308 ... P03472 9655825 MOAD: Ki=14uM
    PDBbind: -logKd/Ki=4.85, Ki=14uM
    9478 2qwe:A (2.0) BS02 ZMR 3.2.1.18 GO:0004308 ... P03472 9655825 MOAD: Ki=0.033uM
    9479 2qwf:A (1.9) BS02 G20 3.2.1.18 GO:0004308 ... P03472 9655825 MOAD: Ki=2.16uM
    PDBbind: -logKd/Ki=5.67, Ki=2.160uM
    9480 2qwg:A (1.8) BS02 G28 3.2.1.18 GO:0004308 ... P03472 9655825 MOAD: ic50=230uM
    PDBbind: -logKd/Ki=3.64, IC50=230uM
    9481 2qwh:A (1.8) BS01 G39 3.2.1.18 GO:0004308 ... P03472 9655825 MOAD: ic50=13uM
    9482 2qwi:A (2.0) BS02 G20 3.2.1.18 GO:0004308 ... P03472 9655825 MOAD: Ki=2.16uM
    9483 2qwj:A (2.0) BS02 G28 3.2.1.18 GO:0004308 ... P03472 9655825 MOAD: ic50=0.23uM
    9484 2qwk:A (1.8) BS01 G39 3.2.1.18 GO:0004308 ... P03472 9655825 MOAD: ic50=0.002uM
    9485 2qwx:A (1.5) BS03 ML1 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=1.4uM
    BindingDB: IC50=11300nM, Ki=57nM
    9486 2qwx:A (1.5) BS04 ML1 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=1.4uM
    BindingDB: IC50=11300nM, Ki=57nM
    9487 2qwx:B (1.5) BS01 ML1 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=1.4uM
    BindingDB: IC50=11300nM, Ki=57nM
    9488 2qwx:B (1.5) BS04 ML1 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=1.4uM
    BindingDB: IC50=11300nM, Ki=57nM
    9489 2qx0:A (1.8) BS04 PH2 2.7.6.3 GO:0003848 ... A0A5P8YCA3 18007032 MOAD: Kd=0.78uM
    PDBbind: -logKd/Ki=6.11, Kd=0.78uM
    9490 2qx0:B (1.8) BS04 PH2 2.7.6.3 GO:0003848 ... A0A5P8YCA3 18007032 MOAD: Kd=0.78uM
    PDBbind: -logKd/Ki=6.11, Kd=0.78uM
    9491 2qx4:A (1.65) BS02 ML1 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=1.4uM
    BindingDB: IC50=11300nM, Ki=57nM
    9492 2qx4:B (1.65) BS01 ML1 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=1.4uM
    BindingDB: IC50=11300nM, Ki=57nM
    9493 2qx4:B (1.65) BS03 ML1 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=1.4uM
    BindingDB: IC50=11300nM, Ki=57nM
    9494 2qx6:A (1.75) BS02 ML1 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=1.4uM
    BindingDB: IC50=11300nM, Ki=57nM
    9495 2qx6:A (1.75) BS04 ML1 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=1.4uM
    BindingDB: IC50=11300nM, Ki=57nM
    9496 2qx6:B (1.75) BS01 ML1 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=1.4uM
    BindingDB: IC50=11300nM, Ki=57nM
    9497 2qx6:B (1.75) BS03 ML1 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=1.4uM
    BindingDB: IC50=11300nM, Ki=57nM
    9498 2qx8:A (1.6) BS02 ML2 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=0.7uM
    BindingDB: IC50=1100nM, Ki=6.5nM
    9499 2qx8:B (1.6) BS02 ML2 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=0.7uM
    BindingDB: IC50=1100nM, Ki=6.5nM
    9500 2qx9:A (2.31) BS02 ML2 1.10.5.1 GO:0001512 ... P16083 18254726 MOAD: Kd=0.7uM
    BindingDB: IC50=1100nM, Ki=6.5nM
    9501 2qx9:B (2.31) BS01 ML2 1.10.5.1 GO:0001512 ... P16083 18254726 BindingDB: IC50=1100nM, Ki=6.5nM
    9502 2qx9:B (2.31) BS02 ML2 1.10.5.1 GO:0001512 ... P16083 18254726 BindingDB: IC50=1100nM, Ki=6.5nM
    9503 2qxs:A (1.7) BS01 RAL ? N/A P03372 20924370 BindingDB: IC50=1.8nM, EC50=2.4nM, Ki=0.37nM
    9504 2qxs:B (1.7) BS01 RAL ? N/A P03372 20924370 BindingDB: IC50=1.8nM, EC50=2.4nM, Ki=0.37nM
    9505 2qxw:A (0.8) BS02 LDT 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 18250329 BindingDB: IC50=30nM
    9506 2qyk:A (2.1) BS01 NPV 3.1.4.53 GO:0004114 ... P27815 17727341 MOAD: ic50=3.3uM
    PDBbind: -logKd/Ki=5.48, IC50=3.3uM
    BindingDB: IC50=3300nM, EC50=20nM
    9507 2qyk:B (2.1) BS01 NPV 3.1.4.53 GO:0004114 ... P27815 17727341 MOAD: ic50=3.3uM
    BindingDB: IC50=3300nM, EC50=20nM
    9508 2qyl:A (1.95) BS03 NPV 3.1.4.53 GO:0004114 ... Q07343 17727341 MOAD: ic50=0.65uM
    PDBbind: -logKd/Ki=6.19, IC50=0.65uM
    BindingDB: IC50=650nM
    9509 2qyn:A (1.57) BS01 NPV 3.1.4.53 GO:0004114 ... Q08499 17727341 MOAD: ic50=0.57uM
    PDBbind: -logKd/Ki=6.24, IC50=0.57uM
    BindingDB: IC50=1nM
    9510 2qyn:B (1.57) BS01 NPV 3.1.4.53 GO:0004114 ... Q08499 17727341 MOAD: ic50=0.57uM
    BindingDB: IC50=1nM
    9511 2qzk:A (1.8) BS01 I21 3.4.23.46 GO:0004190 ... P56817 17827011 MOAD: ic50=27nM
    PDBbind: -logKd/Ki=7.57, IC50=27nM
    9512 2qzl:A (1.8) BS01 IXS 3.4.23.46 GO:0004190 ... P56817 16690314 MOAD: ic50=8nM
    PDBbind: -logKd/Ki=8.10, IC50=8nM
    BindingDB: IC50=8nM
    9513 2qzo:A (1.72) BS02 KN1 ? N/A P03372 20924370 BindingDB: IC50=1300nM
    9514 2qzo:B (1.72) BS02 KN1 ? N/A P03372 20924370 BindingDB: IC50=1300nM
    9515 2qzr:A (1.95) BS02 S79 2.4.2.29 GO:0002099 ... P28720 17902085 MOAD: Ki=55nM
    PDBbind: -logKd/Ki=7.26, Ki=55nM
    9516 2qzz:A (1.6) BS02 EMF 1.1.1.318 GO:0000166 ... Q15GI4 17912370 MOAD: Ki=0.8mM
    9517 2qzz:B (1.6) BS02 EMF 1.1.1.318 GO:0000166 ... Q15GI4 17912370 MOAD: Ki=0.8mM
    9518 2r0u:A (1.9) BS01 M54 2.7.11.1 GO:0000077 ... O14757 17900896 MOAD: ic50=1nM
    PDBbind: -logKd/Ki=9.00, IC50=1.0nM
    BindingDB: IC50=1nM
    9519 2r14:A (1.4) BS02 TXD ? GO:0000166 ... Q51990 17939663 MOAD: Kd=0.63mM
    9520 2r1x:A (1.6) BS01 KDA ? GO:0046872 ... Q52L64 18272175 PDBbind: -logKd/Ki=4.80, Kd=16uM
    9521 2r1x:B (1.6) BS01 KDA ? GO:0002250 ... A2NU21 18272175 PDBbind: -logKd/Ki=4.80, Kd=16uM
    9522 2r1y:A (1.6) BS01 KDO ? GO:0046872 ... Q52L64 18272175 PDBbind: -logKd/Ki=4.51, Kd=31uM
    9523 2r1y:B (1.6) BS02 KDO ? GO:0002250 ... A2NU21 18272175 PDBbind: -logKd/Ki=4.51, Kd=31uM
    9524 2r24:A (1.752) BS02 LDT 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 18250329 BindingDB: IC50=30nM
    9525 2r2l:B (2.23) BS03 PB9 2.5.1.58 GO:0003824 ... Q02293 17606674 MOAD: ic50=0.58nM
    PDBbind: -logKd/Ki=9.00, IC50=1nM
    9526 2r2m:B (2.1) BS03 I50 3.4.21.5 GO:0004252 ... P00734 17889527 MOAD: Ki=47.1nM
    PDBbind: -logKd/Ki=7.33, Ki=47.1nM
    9527 2r2w:U (2.01) BS01 4PG 3.4.21.73 GO:0004252 ... P00749 17905583 MOAD: Ki=34uM
    PDBbind: -logKd/Ki=4.47, Ki=34uM
    9528 2r38:A (1.81) BS01 G4G 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04587 18692068 PDBbind: -logKd/Ki=7.44, Ki=0.036uM
    9529 2r38:B (1.81) BS01 G4G 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04587 18692068 MOAD: Ki=0.036uM
    PDBbind: -logKd/Ki=7.44, Ki=0.036uM
    9530 2r3f:A (1.5) BS01 SC8 2.7.11.22 GO:0000082 ... P24941 17937404 MOAD: ic50=500nM
    PDBbind: -logKd/Ki=6.30, IC50=500nM
    9531 2r3g:A (1.55) BS01 SC9 2.7.11.22 GO:0000082 ... P24941 17937404 MOAD: ic50=800nM
    PDBbind: -logKd/Ki=6.10, IC50=800nM
    9532 2r3h:A (1.5) BS01 SCE 2.7.11.22 GO:0000082 ... P24941 17937404 MOAD: ic50=20000nM
    PDBbind: -logKd/Ki=4.70, IC50=20uM
    9533 2r3i:A (1.28) BS01 SCF 2.7.11.22 GO:0000082 ... P24941 17937404 MOAD: ic50=1000nM
    PDBbind: -logKd/Ki=6.00, IC50=1uM
    9534 2r3j:A (1.65) BS01 SCJ 2.7.11.22 GO:0000082 ... P24941 17937404 MOAD: ic50=10nM
    PDBbind: -logKd/Ki=8.00, IC50=10nM
    9535 2r3k:A (1.7) BS01 SCQ 2.7.11.22 GO:0000082 ... P24941 17937404 MOAD: ic50=100nM
    PDBbind: -logKd/Ki=7.00, IC50=100nM
    9536 2r3l:A (1.65) BS01 SCW 2.7.11.22 GO:0000082 ... P24941 17937404 MOAD: ic50=100nM
    PDBbind: -logKd/Ki=7.00, IC50=100nM
    9537 2r3m:A (1.7) BS01 SCX 2.7.11.22 GO:0000082 ... P24941 17937404 MOAD: ic50=10nM
    PDBbind: -logKd/Ki=8.00, IC50=10nM
    9538 2r3n:A (1.63) BS01 SCZ 2.7.11.22 GO:0000082 ... P24941 17937404 MOAD: ic50=70nM
    PDBbind: -logKd/Ki=7.15, IC50=70nM
    9539 2r3o:A (1.8) BS01 2SC 2.7.11.22 GO:0000082 ... P24941 17937404 MOAD: ic50=600nM
    PDBbind: -logKd/Ki=6.22, IC50=600nM
    9540 2r3p:A (1.66) BS01 3SC 2.7.11.22 GO:0000082 ... P24941 17937404 MOAD: ic50=900nM
    PDBbind: -logKd/Ki=6.05, IC50=900nM
    9541 2r3r:A (1.47) BS01 6SC 2.7.11.22 GO:0000082 ... P24941 17937404 BindingDB: IC50=20nM
    9542 2r3t:A (1.8) BS01 G4G 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04587 18692068 PDBbind: -logKd/Ki=5.85, Ki=1.4uM
    9543 2r3t:B (1.8) BS01 G4G 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04587 18692068 MOAD: Ki=1.4uM
    PDBbind: -logKd/Ki=5.85, Ki=1.4uM
    9544 2r3w:A (1.92) BS01 G3G 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04587 18692068 MOAD: Ki=0.128uM
    PDBbind: -logKd/Ki=6.89, Ki=0.128uM
    9545 2r3w:B (1.92) BS01 G3G 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04587 18692068 PDBbind: -logKd/Ki=6.89, Ki=0.128uM
    9546 2r43:A (1.58) BS01 G3G 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 18692068 PDBbind: -logKd/Ki=6.00, Ki=1uM
    9547 2r43:B (1.58) BS01 G3G 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 18692068 MOAD: Ki=1uM
    PDBbind: -logKd/Ki=6.00, Ki=1uM
    9548 2r4b:A (2.4) BS01 GW7 2.7.10.1 GO:0004672 ... Q15303 18287036 PDBbind: -logKd/Ki=7.18, IC50=66nM
    9549 2r4f:A (1.7) BS01 RIE 1.1.1.34 GO:0004420 ... P04035 18072721 MOAD: ic50=1.5nM
    PDBbind: -logKd/Ki=8.82, IC50=1.5nM
    9550 2r4f:A (1.7) BS02 RIE 1.1.1.34 GO:0004420 ... P04035 18072721 MOAD: ic50=1.5nM
    PDBbind: -logKd/Ki=8.82, IC50=1.5nM
    9551 2r4f:B (1.7) BS01 RIE 1.1.1.34 GO:0004420 ... P04035 18072721 MOAD: ic50=1.5nM
    PDBbind: -logKd/Ki=8.82, IC50=1.5nM
    9552 2r4f:B (1.7) BS02 RIE 1.1.1.34 GO:0004420 ... P04035 18072721 MOAD: ic50=1.5nM
    PDBbind: -logKd/Ki=8.82, IC50=1.5nM
    9553 2r4f:C (1.7) BS01 RIE 1.1.1.34 GO:0004420 ... P04035 18072721 MOAD: ic50=1.5nM
    9554 2r4f:C (1.7) BS02 RIE 1.1.1.34 GO:0004420 ... P04035 18072721 MOAD: ic50=1.5nM
    9555 2r4f:D (1.7) BS01 RIE 1.1.1.34 GO:0004420 ... P04035 18072721 MOAD: ic50=1.5nM
    9556 2r4f:D (1.7) BS02 RIE 1.1.1.34 GO:0004420 ... P04035 18072721 MOAD: ic50=1.5nM
    9557 2r58:A (2.0) BS01 MLY ? GO:0005634 ... Q9VHA0 17932512 PDBbind: -logKd/Ki=2.00, Kd=10mM
    9558 2r59:A (1.89) BS02 PH0 3.3.2.6
    3.4.11.4    		 GO:0003723 ... P09960 18804029 MOAD: Ki=6.5nM
    PDBbind: -logKd/Ki=8.19, Ki=6.5nM
    9559 2r5a:A (2.3) BS01 MLZ ? GO:0005634 ... Q9VHA0 17932512 MOAD: Kd=2500uM
    PDBbind: -logKd/Ki=2.60, Kd=2.5mM
    9560 2r5n:A (1.6) BS01 R5P 2.2.1.1 GO:0000287 ... P27302 17914867 MOAD: Kd=700uM
    9561 2r5p:A (2.3) BS01 MK1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... O12158 18092815 PDBbind: -logKd/Ki=8.48, Ki=3.3nM
    9562 2r5p:B (2.3) BS01 MK1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... O12158 18092815 MOAD: Ki=3.3nM
    PDBbind: -logKd/Ki=8.48, Ki=3.3nM
    9563 2r5p:D (2.3) BS01 MK1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... O12158 18092815 MOAD: Ki=3.3nM
    9564 2r5q:A (2.3) BS01 1UN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... O12158 18092815 PDBbind: -logKd/Ki=8.57, Ki=2.7nM
    9565 2r5q:B (2.3) BS01 1UN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... O12158 18092815 MOAD: Ki=2.7nM
    PDBbind: -logKd/Ki=8.57, Ki=2.7nM
    9566 2r5q:D (2.3) BS01 1UN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... O12158 18092815 MOAD: Ki=2.7nM
    9567 2r5y:A (2.6) BS01 dna ? GO:0000981 ... P09077 17981120 PDBbind: Kd=10.3nM
    9568 2r5y:A (2.6) BS02 dna ? GO:0000981 ... P09077 17981120 PDBbind: Kd=10.3nM
    9569 2r5y:B (2.6) BS01 dna ? GO:0000981 ... P40427 17981120 PDBbind: Kd=10.3nM
    9570 2r5y:B (2.6) BS02 dna ? GO:0000981 ... P40427 17981120 PDBbind: Kd=10.3nM
    9571 2r5z:A (2.6) BS01 dna ? GO:0000981 ... P09077 17981120 PDBbind: Kd=8.63nM
    9572 2r5z:A (2.6) BS02 dna ? GO:0000981 ... P09077 17981120 PDBbind: Kd=8.63nM
    9573 2r5z:B (2.6) BS01 dna ? GO:0000981 ... P40427 17981120 PDBbind: Kd=8.63nM
    9574 2r5z:B (2.6) BS02 dna ? GO:0000981 ... P40427 17981120 PDBbind: Kd=8.63nM
    9575 2r64:A (2.3) BS01 740 2.7.11.22 GO:0000082 ... P24941 18353638 MOAD: ic50=0.03uM
    PDBbind: -logKd/Ki=7.52, IC50=0.03uM
    BindingDB: IC50=30nM
    9576 2r6f:A (3.2) BS01 ADP ? GO:0003677 ... Q5KVB6 18158267 PDBbind: -logKd/Ki=8.00, Kd=10nM
    9577 2r6f:A (3.2) BS02 ADP ? GO:0003677 ... Q5KVB6 18158267 PDBbind: -logKd/Ki=8.00, Kd=10nM
    9578 2r6n:A (1.95) BS01 CKE 3.4.22.38 GO:0006508 ... P43235 17911019 PDBbind: -logKd/Ki=9.00, IC50=1nM
    9579 2r6w:A (2.0) BS01 LLB ? N/A P03372 18474858 MOAD: Ki=0.44nM
    PDBbind: -logKd/Ki=9.36, Ki=0.44nM
    9580 2r6w:B (2.0) BS01 LLB ? N/A P03372 18474858 MOAD: Ki=0.44nM
    9581 2r6y:A (2.0) BS01 LLC ? N/A P03372 18474858 MOAD: Ki=0.32nM
    PDBbind: -logKd/Ki=9.49, Ki=0.32nM
    BindingDB: IC50=120nM
    9582 2r6y:B (2.0) BS01 LLC ? N/A P03372 18474858 MOAD: Ki=0.32nM
    BindingDB: IC50=120nM
    9583 2r75:1 (1.402) BS01 01G ? GO:0000917 ... O66809 18291323 MOAD: Kd=714nM
    PDBbind: -logKd/Ki=6.15, Kd=714nM
    9584 2r7b:A (2.7) BS02 253 2.7.11.1 GO:0004672 ... O15530 17941624 PDBbind: -logKd/Ki=7.22, IC50=0.06uM
    BindingDB: IC50=60nM
    9585 2r8q:A (1.5) BS02 IBM 3.1.4.- GO:0004114 ... Q6S996 17944832 MOAD: ic50=580uM
    PDBbind: -logKd/Ki=3.24, IC50=580uM
    BindingDB: IC50=580000nM
    9586 2r8s:H (1.95) BS01 rna N/A N/A N/A 18162543 PDBbind: Kd=51nM
    9587 2r8s:L (1.95) BS01 rna N/A N/A N/A 18162543 PDBbind: Kd=51nM
    9588 2r9m:A (1.97) BS01 Y11 3.4.22.27 GO:0006508 ... P25774 N/A PDBbind: -logKd/Ki=8.82, IC50=1.5nM
    BindingDB: IC50=1.5nM
    9589 2r9m:B (1.97) BS01 Y11 3.4.22.27 GO:0006508 ... P25774 N/A BindingDB: IC50=1.5nM
    9590 2r9s:A (2.4) BS01 255 2.7.11.24 GO:0004672 ... P53779 17911023 MOAD: ic50=0.15uM
    PDBbind: -logKd/Ki=6.82, IC50=0.15uM
    BindingDB: IC50=150nM
    9591 2r9s:B (2.4) BS01 255 2.7.11.24 GO:0004672 ... P53779 17911023 MOAD: ic50=0.15uM
    BindingDB: IC50=150nM
    9592 2r9w:A (1.8) BS01 23C 3.5.2.6 GO:0008800 ... P00811 18333608 MOAD: Ki=8uM
    PDBbind: -logKd/Ki=5.10, Ki=8uM
    BindingDB: Ki=5000nM
    9593 2r9w:B (1.8) BS01 23C 3.5.2.6 GO:0008800 ... P00811 18333608 MOAD: Ki=8uM
    BindingDB: Ki=5000nM
    9594 2r9x:A (1.9) BS01 WH6 3.5.2.6 GO:0008800 ... P00811 18333608 MOAD: Ki=14uM
    PDBbind: -logKd/Ki=4.85, Ki=14uM
    9595 2r9x:B (1.9) BS01 WH6 3.5.2.6 GO:0008800 ... P00811 18333608 MOAD: Ki=14uM
    9596 2ra0:A (2.3) BS01 JNJ 3.4.21.6 GO:0004252 ... P00742 18159923 MOAD: Ki=15.9nM
    PDBbind: -logKd/Ki=7.80, Ki=15.9nM
    BindingDB: Ki=15.9nM
    9597 2ra6:A (1.5) BS02 ETY ? GO:0005576 ... Q29147 17685895 PDBbind: -logKd/Ki=4.52, Kd=30uM
    9598 2rah:A (2.0) BS01 11P 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 N/A BindingDB: IC50=629.5nM
    9599 2rar:A (1.52) BS02 VN4 ? GO:0000287 ... Q8A090 18398008 MOAD: Ki=700uM
    9600 2rav:A (1.07) BS02 WO6 ? GO:0000287 ... Q8A090 18398008 MOAD: Ki=26uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218