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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    45001 6qh0:A (2.436) BS01 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=99.46nM
    45002 6qh0:A (2.436) BS02 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=99.46nM
    45003 6qh0:B (2.436) BS01 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=99.46nM
    45004 6qh0:B (2.436) BS02 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=99.46nM
    45005 6qh0:C (2.436) BS01 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=99.46nM
    45006 6qh0:C (2.436) BS02 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=99.46nM
    45007 6qh0:D (2.436) BS01 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=99.46nM
    45008 6qh0:D (2.436) BS02 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=99.46nM
    45009 6qh9:A (2.27) BS01 J2N 3.4.21.- GO:0001533 ... Q92876 30691925 PDBbind: -logKd/Ki=5.00, IC50=10uM
    45010 6qha:A (1.82) BS01 J2Q 3.4.21.- GO:0001533 ... Q92876 30691925 PDBbind: -logKd/Ki=5.30, IC50=5.01uM
    45011 6qhb:A (1.84) BS01 J2W 3.4.21.- GO:0001533 ... Q92876 30691925 PDBbind: -logKd/Ki=6.30, IC50=0.50uM
    45012 6qhd:A (2.85) BS01 dna ? GO:0003677 ... P40763 31170499 PDBbind: Kd=20nM
    45013 6qhd:A (2.85) BS02 dna ? GO:0003677 ... P40763 31170499 PDBbind: Kd=20nM
    45014 6qhd:B (2.85) BS01 dna ? GO:0003677 ... P40763 31170499 PDBbind: Kd=20nM
    45015 6qhd:B (2.85) BS02 dna ? GO:0003677 ... P40763 31170499 PDBbind: Kd=20nM
    45016 6qhg:A (1.483) BS01 MGT 2.7.7.48
    3.1.-.-    		 N/A A2SZS3 31136637 MOAD: Kd=737uM
    PDBbind: -logKd/Ki=3.13, Kd=737uM
    45017 6qhg:B (1.483) BS01 MGT 2.7.7.48
    3.1.-.-    		 N/A A2SZS3 31136637 MOAD: Kd=737uM
    45018 6qho:A (2.7) BS01 J3H 2.7.12.2 GO:0004672 ... O14733 31083997 PDBbind: -logKd/Ki=6.20, IC50=631nM
    45019 6qhr:A (2.52) BS01 J3N 2.7.12.2 GO:0004672 ... O14733 31083997 PDBbind: -logKd/Ki=7.72, IC50=19nM
    45020 6qi4:B (1.78) BS04 FKW ? GO:0005245 ... P62166 31243268 MOAD: Kd=43uM
    PDBbind: -logKd/Ki=4.37, Kd=43uM
    45021 6qil:A (2.0) BS01 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=49.32nM
    45022 6qil:A (2.0) BS02 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=49.32nM
    45023 6qil:B (2.0) BS01 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=49.32nM
    45024 6qil:B (2.0) BS02 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=49.32nM
    45025 6qil:C (2.0) BS01 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=49.32nM
    45026 6qil:C (2.0) BS02 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=49.32nM
    45027 6qil:D (2.0) BS01 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=49.32nM
    45028 6qil:D (2.0) BS02 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=49.32nM
    45029 6qj5:A (2.0) BS01 H8R ? GO:0003677 ... P37231 33142057 MOAD: Kd=30.1nM
    45030 6ql1:A (1.42) BS02 V50 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 31481705 MOAD: Kd=15nM
    PDBbind: -logKd/Ki=6.48, Kd=330nM
    BindingDB: Kd=10.0nM
    45031 6ql1:A (1.42) BS03 V50 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 31481705 MOAD: Kd=15nM
    PDBbind: -logKd/Ki=6.48, Kd=330nM
    BindingDB: Kd=10.0nM
    45032 6ql2:A (1.3) BS02 EZL 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 31481705 MOAD: Kd=1.1nM
    PDBbind: -logKd/Ki=7.77, Kd=17nM
    BindingDB: Ki=8nM, IC50=3nM, Kd=0.71nM
    45033 6ql3:A (1.35) BS02 V14 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 31481705 MOAD: Kd=4.5nM
    PDBbind: -logKd/Ki=7.00, Kd=100nM
    BindingDB: Kd=60nM
    45034 6qln:A (1.0) BS01 J5Q ? GO:0030246 ... P17931 31246331 MOAD: Kd=88uM
    PDBbind: -logKd/Ki=4.66, Kd=22uM
    BindingDB: Kd=22000nM
    45035 6qlo:A (1.18) BS01 J5E ? GO:0030246 ... P17931 31246331 MOAD: Kd=92uM
    PDBbind: -logKd/Ki=5.06, Kd=8.8uM
    BindingDB: Kd=8800nM
    45036 6qlp:A (1.081) BS01 J3Q ? GO:0030246 ... P17931 31246331 MOAD: Kd=22uM
    PDBbind: -logKd/Ki=5.28, Kd=5.2uM
    BindingDB: Kd=5200nM
    45037 6qlq:B (1.079) BS01 J4E ? GO:0030246 ... P17931 31246331 MOAD: Kd=31uM
    PDBbind: -logKd/Ki=4.51, Kd=31uM
    BindingDB: Kd=31000nM
    45038 6qlr:A (0.97) BS01 J4N ? GO:0030246 ... P17931 31246331 MOAD: Kd=8.8uM
    PDBbind: -logKd/Ki=4.82, Kd=15uM
    BindingDB: Kd=15000nM
    45039 6qls:A (1.047) BS01 HRK ? GO:0030246 ... P17931 31246331 MOAD: Kd=15uM
    PDBbind: -logKd/Ki=5.35, Kd=4.5uM
    45040 6qlt:A (1.15) BS01 J5W ? GO:0030246 ... P17931 31246331 MOAD: Kd=23uM
    PDBbind: -logKd/Ki=4.04, Kd=92uM
    BindingDB: Kd=92000nM
    45041 6qlu:A (1.1) BS01 J62 ? GO:0030246 ... P17931 31246331 MOAD: Kd=5.2uM
    PDBbind: -logKd/Ki=4.64, Kd=23uM
    BindingDB: Kd=23000nM
    45042 6qm7:L (2.8) BS01 J6E 3.4.25.1 GO:0000502 ... A4IDD6 30962368 PDBbind: -logKd/Ki=6.80, IC50=0.16uM
    45043 6qmd:A (1.94) BS01 J6N ? N/A Q9Z2X8 30973731 MOAD: ic50=170uM
    PDBbind: -logKd/Ki=3.77, IC50=170uM
    45044 6qmd:A (1.94) BS02 J6N ? N/A Q9Z2X8 30973731 MOAD: ic50=170uM
    PDBbind: -logKd/Ki=3.77, IC50=170uM
    45045 6qme:A (1.81) BS01 J6Q ? N/A Q9Z2X8 30973731 MOAD: ic50=44uM
    PDBbind: -logKd/Ki=4.36, IC50=44uM
    45046 6qmj:A (1.86) BS01 J6K ? N/A Q9Z2X8 30973731 MOAD: ic50=0.069uM
    PDBbind: -logKd/Ki=7.36, Kd=0.044uM
    45047 6qmk:A (1.72) BS01 J8H ? N/A Q9Z2X8 30973731 MOAD: ic50=0.047uM
    PDBbind: -logKd/Ki=7.46, Kd=0.035uM
    45048 6qmr:A (2.0) BS01 J6T 3.4.21.46 GO:0004252 ... P00746 30995036 MOAD: ic50=0.012uM
    PDBbind: -logKd/Ki=7.92, IC50=0.012uM
    BindingDB: IC50=12nM
    45049 6qmr:B (2.0) BS01 J6T 3.4.21.46 GO:0004252 ... P00746 30995036 MOAD: ic50=0.012uM
    BindingDB: IC50=12nM
    45050 6qmr:C (2.0) BS01 J6T 3.4.21.46 GO:0004252 ... P00746 30995036 MOAD: ic50=0.012uM
    BindingDB: IC50=12nM
    45051 6qmr:D (2.0) BS01 J6T 3.4.21.46 GO:0004252 ... P00746 30995036 MOAD: ic50=0.012uM
    BindingDB: IC50=12nM
    45052 6qmr:E (2.0) BS01 J6T 3.4.21.46 GO:0004252 ... P00746 30995036 MOAD: ic50=0.012uM
    BindingDB: IC50=12nM
    45053 6qmr:F (2.0) BS01 J6T 3.4.21.46 GO:0004252 ... P00746 30995036 MOAD: ic50=0.012uM
    BindingDB: IC50=12nM
    45054 6qmt:A (1.8) BS01 J7B 3.4.21.46 GO:0004252 ... P00746 30995036 MOAD: ic50=0.12uM
    PDBbind: -logKd/Ki=6.92, IC50=0.120uM
    BindingDB: IC50=120nM
    45055 6qmt:B (1.8) BS01 J7B 3.4.21.46 GO:0004252 ... P00746 30995036 MOAD: ic50=0.12uM
    BindingDB: IC50=120nM
    45056 6qmu:A (1.98) BS01 ZCQ ? GO:0005506 ... P80188 31390134 PDBbind: -logKd/Ki=5.32, Kd=4.8uM
    45057 6qn0:A (1.89) BS02 J8Q 4.2.1.1 GO:0004089 ... O43570 31740053 BindingDB: Kd=0.003000nM
    45058 6qn0:B (1.89) BS02 J8Q 4.2.1.1 GO:0004089 ... O43570 31740053 BindingDB: Kd=0.003000nM
    45059 6qn0:C (1.89) BS02 J8Q 4.2.1.1 GO:0004089 ... O43570 31740053 BindingDB: Kd=0.003000nM
    45060 6qn0:D (1.89) BS02 J8Q 4.2.1.1 GO:0004089 ... O43570 31740053 BindingDB: Kd=0.003000nM
    45061 6qn2:A (1.95) BS02 J92 4.2.1.1 GO:0004089 ... Q16790 31740053 BindingDB: Kd=2.0nM
    45062 6qn2:B (1.95) BS02 J92 4.2.1.1 GO:0004089 ... Q16790 31740053 BindingDB: Kd=2.0nM
    45063 6qn2:C (1.95) BS02 J92 4.2.1.1 GO:0004089 ... Q16790 31740053 BindingDB: Kd=2.0nM
    45064 6qn2:D (1.95) BS02 J92 4.2.1.1 GO:0004089 ... Q16790 31740053 BindingDB: Kd=2.0nM
    45065 6qn5:A (1.96) BS02 J8N 4.2.1.1 GO:0004089 ... Q16790 31740053 BindingDB: Kd=2.0nM
    45066 6qn5:B (1.96) BS02 J8N 4.2.1.1 GO:0004089 ... Q16790 31740053 BindingDB: Kd=2.0nM
    45067 6qn5:C (1.96) BS02 J8N 4.2.1.1 GO:0004089 ... Q16790 31740053 BindingDB: Kd=2.0nM
    45068 6qn5:D (1.96) BS02 J8N 4.2.1.1 GO:0004089 ... Q16790 31740053 BindingDB: Kd=2.0nM
    45069 6qn6:A (2.25) BS02 J8Q 4.2.1.1 GO:0004089 ... Q16790 31740053 BindingDB: Kd=1.3nM
    45070 6qn6:B (2.25) BS02 J8Q 4.2.1.1 GO:0004089 ... Q16790 31740053 BindingDB: Kd=1.3nM
    45071 6qn6:C (2.25) BS02 J8Q 4.2.1.1 GO:0004089 ... Q16790 31740053 BindingDB: Kd=1.3nM
    45072 6qn6:D (2.25) BS02 J8Q 4.2.1.1 GO:0004089 ... Q16790 31740053 BindingDB: Kd=1.3nM
    45073 6qng:A (1.67) BS02 J95 4.2.1.1 GO:0004089 ... O43570 N/A BindingDB: Kd=10000nM
    45074 6qng:B (1.67) BS02 J95 4.2.1.1 GO:0004089 ... O43570 N/A BindingDB: Kd=10000nM
    45075 6qng:C (1.67) BS02 J95 4.2.1.1 GO:0004089 ... O43570 N/A BindingDB: Kd=10000nM
    45076 6qng:D (1.67) BS02 J95 4.2.1.1 GO:0004089 ... O43570 N/A BindingDB: Kd=10000nM
    45077 6qnl:A (1.53) BS02 J92 4.2.1.1 GO:0004089 ... O43570 31740053 BindingDB: Kd=0.005000nM
    45078 6qnl:B (1.53) BS02 J92 4.2.1.1 GO:0004089 ... O43570 31740053 BindingDB: Kd=0.005000nM
    45079 6qnl:C (1.53) BS02 J92 4.2.1.1 GO:0004089 ... O43570 31740053 BindingDB: Kd=0.005000nM
    45080 6qnl:D (1.53) BS02 J92 4.2.1.1 GO:0004089 ... O43570 31740053 BindingDB: Kd=0.005000nM
    45081 6qot:A (1.62) BS01 6SD 2.1.1.228 GO:0002939 ... B1MDI3 32602532 MOAD: Kd=0.17mM
    45082 6qot:B (1.62) BS01 6SD 2.1.1.228 GO:0002939 ... B1MDI3 32602532 MOAD: Kd=0.17mM
    45083 6qou:A (1.56) BS01 JB8 2.1.1.228 GO:0002939 ... B1MDI3 32602532 MOAD: Kd=0.26mM
    45084 6qou:B (1.56) BS01 JB8 2.1.1.228 GO:0002939 ... B1MDI3 32602532 MOAD: Kd=0.26mM
    45085 6qp0:A (2.409) BS01 ADP ? N/A G0SHI1 30916349 MOAD: Kd=1uM
    45086 6qpl:B (1.6) BS01 JC5 ? GO:0007276 ... Q9Y657 31260300 MOAD: ic50=77nM
    PDBbind: -logKd/Ki=7.04, Kd=91nM
    BindingDB: IC50=77nM, Kd=91nM
    45087 6qqq:A (1.85) BS01 JDE 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=6.7uM
    PDBbind: -logKd/Ki=5.17, Kd=6.7uM
    45088 6qqq:B (1.85) BS01 JDE 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=6.7uM
    PDBbind: -logKd/Ki=5.17, Kd=6.7uM
    45089 6qqs:A (1.76) BS01 JCZ 2.1.1.228 GO:0002939 ... B1MDI3 32602532 MOAD: Kd=110uM
    45090 6qqs:B (1.76) BS01 JCZ 2.1.1.228 GO:0002939 ... B1MDI3 32602532 MOAD: Kd=110uM
    45091 6qqt:A (1.673) BS01 JCH 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=59uM
    PDBbind: -logKd/Ki=4.23, Kd=59uM
    45092 6qqt:B (1.673) BS01 JCH 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=59uM
    PDBbind: -logKd/Ki=4.23, Kd=59uM
    45093 6qqu:A (1.59) BS01 JF8 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=5uM
    PDBbind: -logKd/Ki=5.30, Kd=5.0uM
    45094 6qqu:B (1.59) BS01 JF8 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=5uM
    PDBbind: -logKd/Ki=5.30, Kd=5.0uM
    45095 6qqv:A (1.712) BS01 JEW 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=12uM
    PDBbind: -logKd/Ki=4.92, Kd=12uM
    45096 6qqv:B (1.712) BS01 JEW 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=12uM
    PDBbind: -logKd/Ki=4.92, Kd=12uM
    45097 6qqw:A (1.8) BS01 JDQ 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=19uM
    PDBbind: -logKd/Ki=4.72, Kd=19uM
    45098 6qqw:B (1.8) BS01 JDQ 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=19uM
    PDBbind: -logKd/Ki=4.72, Kd=19uM
    45099 6qqy:A (1.49) BS01 JD2 2.1.1.228 GO:0002939 ... B1MDI3 32602532 MOAD: Kd=0.5uM
    45100 6qqy:B (1.49) BS01 JD2 2.1.1.228 GO:0002939 ... B1MDI3 32602532 MOAD: Kd=0.5uM
    45101 6qqz:A (1.702) BS01 JEB 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=0.18uM
    PDBbind: -logKd/Ki=6.74, Kd=0.18uM
    45102 6qqz:B (1.702) BS01 JEB 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=0.18uM
    PDBbind: -logKd/Ki=6.74, Kd=0.18uM
    45103 6qr0:A (1.59) BS01 JFB 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=0.12uM
    PDBbind: -logKd/Ki=6.92, Kd=0.12uM
    45104 6qr0:B (1.59) BS01 JFB 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=0.12uM
    PDBbind: -logKd/Ki=6.92, Kd=0.12uM
    45105 6qr1:A (1.67) BS01 JFT 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=8.5uM
    PDBbind: -logKd/Ki=5.07, Kd=8.5uM
    45106 6qr1:B (1.67) BS01 JFT 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=8.5uM
    PDBbind: -logKd/Ki=5.07, Kd=8.5uM
    45107 6qr2:A (1.55) BS01 JQB 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=3.2uM
    PDBbind: -logKd/Ki=5.49, Kd=3.2uM
    45108 6qr2:B (1.55) BS01 JQB 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=3.2uM
    PDBbind: -logKd/Ki=5.49, Kd=3.2uM
    45109 6qr3:A (1.614) BS01 JE8 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=0.36uM
    PDBbind: -logKd/Ki=6.44, Kd=0.36uM
    45110 6qr3:B (1.614) BS01 JE8 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=0.36uM
    PDBbind: -logKd/Ki=6.44, Kd=0.36uM
    45111 6qr4:A (1.52) BS01 JD8 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=0.59uM
    PDBbind: -logKd/Ki=6.23, Kd=0.59uM
    45112 6qr4:B (1.52) BS01 JD8 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=0.59uM
    PDBbind: -logKd/Ki=6.23, Kd=0.59uM
    45113 6qr5:A (1.81) BS01 JFH 2.1.1.228 GO:0002939 ... B1MDI3 32602532 MOAD: Kd=0.49uM
    45114 6qr5:B (1.81) BS01 JFH 2.1.1.228 GO:0002939 ... B1MDI3 32602532 MOAD: Kd=0.49uM
    45115 6qr6:A (1.71) BS01 JCK 2.1.1.228 GO:0002939 ... B1MDI3 32602532 MOAD: Kd=0.027uM
    45116 6qr6:B (1.71) BS01 JCK 2.1.1.228 GO:0002939 ... B1MDI3 32602532 MOAD: Kd=0.027uM
    45117 6qr7:A (2.03) BS01 JEK 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=70nM
    PDBbind: -logKd/Ki=7.15, Kd=70nM
    45118 6qr7:B (2.03) BS01 JEK 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=70nM
    PDBbind: -logKd/Ki=7.15, Kd=70nM
    45119 6qr8:A (2.15) BS01 JDH 2.1.1.228 GO:0002939 ... B1MDI3 32602532 MOAD: Kd=0.073uM
    45120 6qr8:B (2.15) BS01 JDH 2.1.1.228 GO:0002939 ... B1MDI3 32602532 MOAD: Kd=0.073uM
    45121 6qr9:A (2.42) BS01 JEE 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=190nM
    PDBbind: -logKd/Ki=6.72, Kd=190nM
    45122 6qr9:B (2.42) BS01 JEE 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=190nM
    PDBbind: -logKd/Ki=6.72, Kd=190nM
    45123 6qra:A (1.71) BS01 JDK 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=710nM
    PDBbind: -logKd/Ki=6.15, Kd=710nM
    45124 6qra:B (1.71) BS01 JDK 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=710nM
    PDBbind: -logKd/Ki=6.15, Kd=710nM
    45125 6qrb:A (1.66) BS01 JEQ 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=27nM
    45126 6qrb:A (1.66) BS02 JEQ 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=27nM
    45127 6qrb:B (1.66) BS01 JEQ 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=27nM
    45128 6qrc:A (1.73) BS01 JFE 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=13uM
    PDBbind: -logKd/Ki=4.89, Kd=13uM
    45129 6qrc:B (1.73) BS01 JFE 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=13uM
    PDBbind: -logKd/Ki=4.89, Kd=13uM
    45130 6qrd:A (1.75) BS01 JEH 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=100nM
    PDBbind: -logKd/Ki=7.00, Kd=100nM
    45131 6qrd:B (1.75) BS01 JEH 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=100nM
    PDBbind: -logKd/Ki=7.00, Kd=100nM
    45132 6qre:A (1.93) BS01 JCQ 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=14uM
    PDBbind: -logKd/Ki=4.85, Kd=14uM
    45133 6qre:A (1.93) BS02 JCQ 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=14uM
    PDBbind: -logKd/Ki=4.85, Kd=14uM
    45134 6qre:A (1.93) BS03 JCQ 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=14uM
    PDBbind: -logKd/Ki=4.85, Kd=14uM
    45135 6qre:B (1.93) BS01 JCQ 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=14uM
    PDBbind: -logKd/Ki=4.85, Kd=14uM
    45136 6qre:B (1.93) BS02 JCQ 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=14uM
    PDBbind: -logKd/Ki=4.85, Kd=14uM
    45137 6qre:B (1.93) BS03 JCQ 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=14uM
    PDBbind: -logKd/Ki=4.85, Kd=14uM
    45138 6qrf:A (1.86) BS01 JF5 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=33uM
    PDBbind: -logKd/Ki=4.48, Kd=33uM
    45139 6qrf:A (1.86) BS02 JF5 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=33uM
    PDBbind: -logKd/Ki=4.48, Kd=33uM
    45140 6qrf:A (1.86) BS03 JF5 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=33uM
    PDBbind: -logKd/Ki=4.48, Kd=33uM
    45141 6qrf:B (1.86) BS01 JF5 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=33uM
    PDBbind: -logKd/Ki=4.48, Kd=33uM
    45142 6qrf:B (1.86) BS02 JF5 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=33uM
    PDBbind: -logKd/Ki=4.48, Kd=33uM
    45143 6qrf:B (1.86) BS03 JF5 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=33uM
    PDBbind: -logKd/Ki=4.48, Kd=33uM
    45144 6qrg:A (1.84) BS01 JET 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=10uM
    PDBbind: -logKd/Ki=5.00, Kd=10uM
    45145 6qrg:B (1.84) BS01 JET 2.1.1.228 GO:0002939 ... B1MDI3 31282680 MOAD: Kd=10uM
    PDBbind: -logKd/Ki=5.00, Kd=10uM
    45146 6qri:B (2.4) BS02 CV9 3.6.4.- GO:0000287 ... P68135 31260301 PDBbind: -logKd/Ki=4.82, IC50=15.21uM
    45147 6qri:B (2.4) BS03 CV9 3.6.4.- GO:0000287 ... P68135 31260301 PDBbind: -logKd/Ki=4.82, IC50=15.21uM
    45148 6qrl:A (1.84) BS01 C2E 2.7.13.3 GO:0000160 ... Q9ABT2 31882446 MOAD: Kd=1.5uM
    45149 6qrl:A (1.84) BS02 C2E 2.7.13.3 GO:0000160 ... Q9ABT2 31882446 MOAD: Kd=1.5uM
    45150 6qrl:B (1.84) BS01 C2E 2.7.13.3 GO:0000160 ... Q9ABT2 31882446 MOAD: Kd=1.5uM
    45151 6qs5:A (1.961) BS01 JGB 2.7.11.1 GO:0004672 ... P28523 22794353 MOAD: ic50=0.57uM
    PDBbind: -logKd/Ki=6.24, IC50=0.57uM
    45152 6qsw:AAA (1.64) BS01 JGT 3.4.21.47 GO:0004252 ... P00751 30926668 BindingDB: IC50=6600nM, Kd=10000nM
    45153 6qsw:BBB (1.64) BS01 JGT 3.4.21.47 GO:0004252 ... P00751 30926668 BindingDB: IC50=6600nM, Kd=10000nM
    45154 6qsw:CCC (1.64) BS01 JGT 3.4.21.47 GO:0004252 ... P00751 30926668 BindingDB: IC50=6600nM, Kd=10000nM
    45155 6qsx:AAA (1.77) BS01 JGN 3.4.21.47 GO:0004252 ... P00751 30926668 BindingDB: IC50=3350nM
    45156 6qsx:BBB (1.77) BS01 JGN 3.4.21.47 GO:0004252 ... P00751 30926668 BindingDB: IC50=3350nM
    45157 6qtg:A (2.7) BS01 JH8 2.7.11.22
    2.7.11.23    		 GO:0004672 ... P49336 32024684 BindingDB: Kd=0.770000nM
    45158 6qtj:A (2.48) BS01 JHK 2.7.11.22
    2.7.11.23    		 GO:0004672 ... P49336 32024684 MOAD: ic50=1.8nM
    45159 6qu7:A (1.52) BS02 JJE 1.3.5.2 GO:0004151 ... Q02127 30940908 BindingDB: IC50=4.17nM
    45160 6qua:A (2.681) BS01 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=177.55nM
    45161 6qua:A (2.681) BS02 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=177.55nM
    45162 6qua:B (2.681) BS01 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=177.55nM
    45163 6qua:B (2.681) BS02 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=177.55nM
    45164 6qua:C (2.681) BS01 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=177.55nM
    45165 6qua:C (2.681) BS02 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=177.55nM
    45166 6qua:D (2.681) BS01 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=177.55nM
    45167 6qua:D (2.681) BS02 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=177.55nM
    45168 6qut:A (1.96) BS02 J8N 4.2.1.1 GO:0004089 ... Q16790 31740053 BindingDB: Kd=2.0nM
    45169 6qut:B (1.96) BS02 J8N 4.2.1.1 GO:0004089 ... Q16790 31740053 BindingDB: Kd=2.0nM
    45170 6qut:C (1.96) BS02 J8N 4.2.1.1 GO:0004089 ... Q16790 31740053 BindingDB: Kd=2.0nM
    45171 6qut:C (1.96) BS03 J8N 4.2.1.1 GO:0004089 ... Q16790 31740053 BindingDB: Kd=2.0nM
    45172 6qut:D (1.96) BS01 J8N 4.2.1.1 GO:0004089 ... Q16790 31740053 BindingDB: Kd=2.0nM
    45173 6qut:D (1.96) BS03 J8N 4.2.1.1 GO:0004089 ... Q16790 31740053 BindingDB: Kd=2.0nM
    45174 6qut:D (1.96) BS04 J8N 4.2.1.1 GO:0004089 ... Q16790 31740053 BindingDB: Kd=2.0nM
    45175 6quv:B (1.475) BS01 JJN 3.6.5.2 GO:0003924 ... P01116 31231840 MOAD: Kd=1mM
    PDBbind: -logKd/Ki=3.00, Kd=1mM
    45176 6quw:B (1.242) BS02 JJQ 3.6.5.2 GO:0003924 ... P01116 31231840 PDBbind: -logKd/Ki=2.82, Kd>1.5mM
    45177 6qux:B (1.62) BS02 JJN 3.6.5.2 GO:0003924 ... P01116 31231840 MOAD: Kd=1mM
    45178 6qva:A (2.05) BS01 9PI ? N/A Q8KE09 31133615 MOAD: ic50~1uM
    45179 6qw7:B (1.78) BS01 MK7 3.5.2.6 GO:0008800 ... Q9RBQ1 31383664 MOAD: ic50=470nM
    PDBbind: -logKd/Ki=6.33, IC50=470nM
    45180 6qw8:A (1.1) BS01 MK7 3.5.2.6 GO:0008800 ... G3G192 31383664 PDBbind: -logKd/Ki=6.40, IC50=400nM
    45181 6qw9:A (1.04) BS01 MK7 3.5.2.6 GO:0008800 ... Q9F663 31383664 PDBbind: -logKd/Ki=6.64, IC50=230nM
    45182 6qwa:A (1.06) BS01 MK7 3.5.2.6 GO:0008800 ... Q9F663 31383664 PDBbind: -logKd/Ki=6.59, IC50=260nM
    45183 6qwb:A (1.04) BS02 MK7 3.5.2.6 GO:0008800 ... Q9F663 31383664 PDBbind: -logKd/Ki=6.04, IC50=910nM
    45184 6qwi:A (2.85) BS01 JJW 3.2.1.21 GO:0004553 ... P22073 31226649 PDBbind: -logKd/Ki=4.29, Ki=51uM
    45185 6qxa:A (3.41) BS08 GQB 7.2.3.1 GO:0000287 ... Q9S5X0 31131322 PDBbind: -logKd/Ki=5.77, IC50=1.7uM
    45186 6qxa:A (3.41) BS09 GQB 7.2.3.1 GO:0000287 ... Q9S5X0 31131322 PDBbind: -logKd/Ki=5.77, IC50=1.7uM
    45187 6qxd:A (2.317) BS03 JKB ? GO:0016491 ... B2ZB02 31202126 MOAD: ic50=0.96uM
    PDBbind: -logKd/Ki=6.02, IC50=0.96uM
    45188 6qxg:A (2.08) BS01 UFP 2.1.1.45 GO:0000900 ... P04818 30935102 MOAD: Ki=1.1nM
    BindingDB: Ki=14nM
    45189 6qxg:A (2.08) BS02 UFP 2.1.1.45 GO:0000900 ... P04818 30935102 MOAD: Ki=1.1nM
    BindingDB: Ki=14nM
    45190 6qxg:B (2.08) BS01 UFP 2.1.1.45 GO:0000900 ... P04818 30935102 MOAD: Ki=1.1nM
    BindingDB: Ki=14nM
    45191 6qxg:B (2.08) BS02 UFP 2.1.1.45 GO:0000900 ... P04818 30935102 MOAD: Ki=1.1nM
    BindingDB: Ki=14nM
    45192 6qxg:C (2.08) BS01 UFP 2.1.1.45 GO:0000900 ... P04818 30935102 MOAD: Ki=1.1nM
    BindingDB: Ki=14nM
    45193 6qxj:A (1.7) BS03 JKQ ? GO:0005515 ... P0AEX9
    Q07820    		 31339316 PDBbind: -logKd/Ki=4.79, Kd=16.4uM
    45194 6qxs:A (2.88) BS01 UFP 2.1.1.45 GO:0004799 ... Q834R3 30935102 PDBbind: -logKd/Ki=7.13, Ki=74nM
    45195 6qxs:B (2.88) BS01 UFP 2.1.1.45 GO:0004799 ... Q834R3 30935102 PDBbind: -logKd/Ki=7.13, Ki=74nM
    45196 6qxu:A (1.2) BS01 JKN 2.4.2.-
    2.4.2.30    		 GO:0003950 ... O95271 31381853 MOAD: ic50=7nM
    PDBbind: -logKd/Ki=8.15, IC50=7.0nM
    BindingDB: IC50=10.0nM
    45197 6qyk:A (2.3) BS03 JLB ? GO:0005515 ... P0AEX9
    Q07820    		 31339316 PDBbind: -logKd/Ki=5.55, Ki=2.8uM
    45198 6qyl:A (2.2) BS03 JLE ? GO:0005515 ... P0AEX9
    Q07820    		 31339316 PDBbind: -logKd/Ki=6.08, Kd=0.83uM
    45199 6qyn:A (2.5) BS03 JL8 ? GO:0005515 ... P0AEX9
    Q07820    		 31339316 PDBbind: -logKd/Ki=7.62, Kd=0.024uM
    45200 6qyo:A (2.1) BS03 JLH ? GO:0005515 ... P0AEX9
    Q07820    		 31339316 PDBbind: -logKd/Ki=7.52, Kd=0.030uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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