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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    3401 1p6n:A (2.5) BS03 DP9 1.14.13.39 GO:0004517 ... P29473 14718923 MOAD: Ki=110uM
    BindingDB: IC50=29000nM, Ki=128000nM
    3402 1p6n:B (2.5) BS05 DP9 1.14.13.39 GO:0004517 ... P29473 14718923 MOAD: Ki=110uM
    BindingDB: IC50=29000nM, Ki=128000nM
    3403 1p71:A (1.9) BS01 dna ? GO:0003677 ... P05514 12853489 PDBbind: Kd=3.5nM
    3404 1p71:A (1.9) BS02 dna ? GO:0003677 ... P05514 12853489 PDBbind: Kd=3.5nM
    3405 1p71:B (1.9) BS01 dna ? GO:0003677 ... P05514 12853489 PDBbind: Kd=3.5nM
    3406 1p71:B (1.9) BS02 dna ? GO:0003677 ... P05514 12853489 PDBbind: Kd=3.5nM
    3407 1p78:A (2.25) BS01 dna ? GO:0003677 ... P05514 12853489 PDBbind: Kd=3.5nM
    3408 1p78:A (2.25) BS02 dna ? GO:0003677 ... P05514 12853489 PDBbind: Kd=3.5nM
    3409 1p78:B (2.25) BS01 dna ? GO:0003677 ... P05514 12853489 PDBbind: Kd=3.5nM
    3410 1p78:B (2.25) BS02 dna ? GO:0003677 ... P05514 12853489 PDBbind: Kd=3.5nM
    3411 1p7h:L (2.6) BS01 dna ? GO:0003677 ... Q13469 12949493 PDBbind: Kd=20nM
    3412 1p7h:L (2.6) BS02 dna ? GO:0003677 ... Q13469 12949493 PDBbind: Kd=20nM
    3413 1p7h:M (2.6) BS01 dna ? GO:0003677 ... Q13469 12949493 PDBbind: Kd=20nM
    3414 1p7h:M (2.6) BS02 dna ? GO:0003677 ... Q13469 12949493 PDBbind: Kd=20nM
    3415 1p7h:N (2.6) BS01 dna ? GO:0003677 ... Q13469 12949493 PDBbind: Kd=20nM
    3416 1p7h:N (2.6) BS02 dna ? GO:0003677 ... Q13469 12949493 PDBbind: Kd=20nM
    3417 1p7h:O (2.6) BS01 dna ? GO:0003677 ... Q13469 12949493 PDBbind: Kd=20nM
    3418 1p7h:O (2.6) BS02 dna ? GO:0003677 ... Q13469 12949493 PDBbind: Kd=20nM
    3419 1p7m:A (-1.00) BS02 ADK 3.2.2.20 GO:0003824 ... P05100 13129925 PDBbind: -logKd/Ki=4.38, Kd=42uM
    BindingDB: IC50=1500000nM
    3420 1p7t:A (1.95) BS03 PYR 2.3.3.9 GO:0000287 ... P37330 12930982 MOAD: Ki=1mM
    3421 1p7t:B (1.95) BS03 PYR 2.3.3.9 GO:0000287 ... P37330 12930982 MOAD: Ki=1mM
    3422 1p8d:A (2.8) BS02 CO1 ? GO:0003677 ... P55055 12736258 BindingDB: EC50=286nM
    3423 1p8d:B (2.8) BS02 CO1 ? GO:0003677 ... P55055 12736258 BindingDB: EC50=286nM
    3424 1p8k:Z (2.6) BS01 dna 3.1.-.- GO:0004519 ... P03880 14633971 PDBbind: Kd=11nM
    3425 1p8k:Z (2.6) BS02 dna 3.1.-.- GO:0004519 ... P03880 14633971 PDBbind: Kd=11nM
    3426 1p8k:Z (2.6) BS03 dna 3.1.-.- GO:0004519 ... P03880 14633971 PDBbind: Kd=11nM
    3427 1p8k:Z (2.6) BS04 dna 3.1.-.- GO:0004519 ... P03880 14633971 PDBbind: Kd=11nM
    3428 1p93:A (2.7) BS03 DEX ? N/A P04150 12686538 PDBbind: -logKd/Ki=7.72, Kd=19nM
    BindingDB: EC50=2.5nM, Ki=1.2nM, IC50=5nM, Kd=19nM
    3429 1p93:B (2.7) BS02 DEX ? N/A P04150 12686538 BindingDB: EC50=2.5nM, Ki=1.2nM, IC50=5nM, Kd=19nM
    3430 1p93:C (2.7) BS03 DEX ? N/A P04150 12686538 BindingDB: EC50=2.5nM, Ki=1.2nM, IC50=5nM, Kd=19nM
    3431 1p93:D (2.7) BS02 DEX ? N/A P04150 12686538 BindingDB: EC50=2.5nM, Ki=1.2nM, IC50=5nM, Kd=19nM
    3432 1p9p:A (2.5) BS01 SAH 2.1.1.228 GO:0000287 ... P0A873 14583191 MOAD: Kd=68nM
    3433 1pa9:A (2.0) BS01 CSN 3.1.3.48 GO:0004725 ... P15273 12810712 MOAD: Ki=25uM
    PDBbind: -logKd/Ki=4.60, Ki=25uM
    3434 1pb7:A (1.35) BS01 GLY ? GO:0015276 ... P35439 12805203 BindingDB: IC50=6200nM
    3435 1pb8:A (1.45) BS01 DSN ? GO:0015276 ... P35439 12805203 MOAD: Ki=7.02uM
    PDBbind: -logKd/Ki=5.15, Ki=7.02uM
    BindingDB: IC50=670.0nM
    3436 1pb9:A (1.6) BS01 4AX ? GO:0015276 ... P35439 12805203 MOAD: Ki=241uM
    PDBbind: -logKd/Ki=3.62, Ki=241uM
    3437 1pbk:A (2.5) BS01 RAP 5.2.1.8 GO:0003755 ... Q00688 N/A MOAD: Ki=0.9nM
    PDBbind: -logKd/Ki=9.05, Ki=0.9nM
    3438 1pbq:A (1.9) BS01 DK1 ? GO:0015276 ... P35439 12805203 MOAD: Ki=0.54uM
    PDBbind: -logKd/Ki=6.27, Ki=0.54uM
    BindingDB: Ki=40nM, EC50=330nM, IC50=860nM
    3439 1pbq:B (1.9) BS01 DK1 ? GO:0015276 ... P35439 12805203 MOAD: Ki=0.54uM
    BindingDB: Ki=40nM, EC50=330nM, IC50=860nM
    3440 1pcg:A (2.7) BS02 EST ? N/A P03372 13679575 BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    3441 1pcg:B (2.7) BS02 EST ? N/A P03372 13679575 BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    3442 1pdz:A (2.2) BS01 PGA 4.2.1.11 GO:0000015 ... P56252 7547999 MOAD: Ki=0.2mM
    PDBbind: -logKd/Ki=3.70, Ki=0.2mM
    3443 1pf7:E (2.6) BS01 IMH 2.4.2.1 GO:0000255 ... P00491 13679061 PDBbind: -logKd/Ki=10.14, Ki=72pM
    3444 1pf8:A (2.51) BS01 SU9 2.7.11.22 GO:0000082 ... P24941 14550307 PDBbind: -logKd/Ki=7.51, Ki=0.031uM
    BindingDB: IC50=22nM
    3445 1pfu:A (1.91) BS02 MPJ 6.1.1.10 GO:0000166 ... P00959 12946347 MOAD: Kd=1900uM
    PDBbind: -logKd/Ki=2.72, Kd=1900uM
    3446 1pfy:A (1.93) BS02 MSP 6.1.1.10 GO:0000166 ... P00959 12946347 MOAD: ic50~7nM
    PDBbind: -logKd/Ki=8.15, IC50=7nM
    3447 1pg0:A (1.9) BS01 MOD 6.1.1.10 GO:0000166 ... P00959 12946347 MOAD: Kd~1uM
    3448 1pg2:A (1.75) BS02 MET 6.1.1.10 GO:0000166 ... P00959 12946347 PDBbind: -logKd/Ki=4.96, Kd=11uM
    3449 1pge:A (3.5) BS02 ISF 1.14.99.1 GO:0001516 ... P05979 8652509 BindingDB: IC50=1000nM
    3450 1pge:B (3.5) BS02 ISF 1.14.99.1 GO:0001516 ... P05979 8652509 BindingDB: IC50=1000nM
    3451 1pgf:A (4.5) BS02 IMM 1.14.99.1 GO:0001516 ... P05979 8652509 BindingDB: IC50=780nM
    3452 1pgf:B (4.5) BS02 IMM 1.14.99.1 GO:0001516 ... P05979 8652509 BindingDB: IC50=780nM
    3453 1pgg:A (4.5) BS02 IMM 1.14.99.1 GO:0001516 ... P05979 8652509 BindingDB: IC50=780nM
    3454 1pgg:B (4.5) BS02 IMM 1.14.99.1 GO:0001516 ... P05979 8652509 BindingDB: IC50=780nM
    3455 1pgp:A (2.5) BS01 6PG 1.1.1.44 GO:0004616 ... P00349 7922042 MOAD: Kd=2uM
    PDBbind: -logKd/Ki=5.70, Kd=2uM
    3456 1ph0:A (2.2) BS01 418 3.1.3.48 GO:0004725 ... P18031 12877578 PDBbind: -logKd/Ki=6.92, Ki=120nM
    BindingDB: Ki=120nM
    3457 1phw:A (2.36) BS01 N 2.5.1.55 GO:0005737 ... P0A715 16023668 MOAD: Ki=0.5mM
    PDBbind: -logKd/Ki=3.30, Ki=0.5mM
    3458 1pi4:A (1.39) BS01 SM3 3.5.2.6 GO:0008800 ... P00811 14661960 MOAD: Ki=37nM
    PDBbind: -logKd/Ki=7.43, Ki=37nM
    3459 1pi4:B (1.39) BS01 SM3 3.5.2.6 GO:0008800 ... P00811 14661960 MOAD: Ki=37nM
    3460 1pi5:A (1.49) BS01 SM2 3.5.2.6 GO:0008800 ... P00811 14661960 MOAD: Ki=17nM
    PDBbind: -logKd/Ki=7.77, Ki=17nM
    3461 1pi5:B (1.49) BS01 SM2 3.5.2.6 GO:0008800 ... P00811 14661960 MOAD: Ki=17nM
    3462 1pi5:B (1.49) BS02 SM2 3.5.2.6 GO:0008800 ... P00811 14661960 MOAD: Ki=17nM
    3463 1pig:A (2.2) BS01 GLC 3.2.1.1 GO:0003824 ... P00690 8757803 PDBbind: -logKd/Ki=9.15, IC50=0.7nM
    3464 1pig:A (2.2) BS02 AGL 3.2.1.1 GO:0003824 ... P00690 8757803 PDBbind: -logKd/Ki=9.15, IC50=0.7nM
    3465 1pig:A (2.2) BS03 GLC 3.2.1.1 GO:0003824 ... P00690 8757803 PDBbind: -logKd/Ki=9.15, IC50=0.7nM
    3466 1pig:A (2.2) BS04 AGL 3.2.1.1 GO:0003824 ... P00690 8757803 PDBbind: -logKd/Ki=9.15, IC50=0.7nM
    3467 1pig:A (2.2) BS05 GLC 3.2.1.1 GO:0003824 ... P00690 8757803 PDBbind: -logKd/Ki=9.15, IC50=0.7nM
    3468 1pig:A (2.2) BS06 GLC 3.2.1.1 GO:0003824 ... P00690 8757803 PDBbind: -logKd/Ki=9.15, IC50=0.7nM
    3469 1pig:A (2.2) BS07 GLC 3.2.1.1 GO:0003824 ... P00690 8757803 PDBbind: -logKd/Ki=9.15, IC50=0.7nM
    3470 1pig:A (2.2) BS08 BGC 3.2.1.1 GO:0003824 ... P00690 8757803 PDBbind: -logKd/Ki=9.15, IC50=0.7nM
    3471 1pig:A (2.2) BS09 HMC 3.2.1.1 GO:0003824 ... P00690 8757803 PDBbind: -logKd/Ki=9.15, IC50=0.7nM
    3472 1pig:A (2.2) BS10 BGC 3.2.1.1 GO:0003824 ... P00690 8757803 PDBbind: -logKd/Ki=9.15, IC50=0.7nM
    3473 1pk0:A (3.3) BS01 EMA 4.6.1.1 GO:0005576 ... P40136 14978283 PDBbind: -logKd/Ki=7.57, Ki=27nM
    3474 1pk8:A (2.1) BS02 ATP ? GO:0005524 ... P09951 14688264 MOAD: Kd=120nM
    3475 1pk8:B (2.1) BS02 ATP ? GO:0005524 ... P09951 14688264 MOAD: Kd=120nM
    3476 1pk8:C (2.1) BS02 ATP ? GO:0005524 ... P09951 14688264 MOAD: Kd=120nM
    3477 1pk8:D (2.1) BS02 ATP ? GO:0005524 ... P09951 14688264 MOAD: Kd=120nM
    3478 1pk8:E (2.1) BS02 ATP ? GO:0005524 ... P09951 14688264 MOAD: Kd=120nM
    3479 1pk8:F (2.1) BS02 ATP ? GO:0005524 ... P09951 14688264 MOAD: Kd=120nM
    3480 1pk8:G (2.1) BS02 ATP ? GO:0005524 ... P09951 14688264 MOAD: Kd=120nM
    3481 1pk8:H (2.1) BS02 ATP ? GO:0005524 ... P09951 14688264 MOAD: Kd=120nM
    3482 1pkd:A (2.3) BS01 UCN 2.7.11.22 GO:0000082 ... P24941 N/A BindingDB: Ki=30nM
    3483 1pkd:C (2.3) BS01 UCN 2.7.11.22 GO:0000082 ... P24941 N/A BindingDB: Ki=30nM
    3484 1pkx:A (1.9) BS01 XMP 2.1.2.3
    3.5.4.10    		 GO:0003360 ... P31939 14756553 MOAD: Ki=0.12uM
    PDBbind: -logKd/Ki=6.92, Ki=0.12uM
    3485 1pkx:C (1.9) BS01 XMP 2.1.2.3
    3.5.4.10    		 GO:0003360 ... P31939 14756553 MOAD: Ki=0.12uM
    3486 1pl0:A (2.6) BS03 BW2 2.1.2.3
    3.5.4.10    		 GO:0003360 ... P31939 14966129 PDBbind: -logKd/Ki=8.22, Ki=6nM
    BindingDB: Ki=6.0nM, IC50=1000nM
    3487 1pl0:B (2.6) BS02 BW2 2.1.2.3
    3.5.4.10    		 GO:0003360 ... P31939 14966129 PDBbind: -logKd/Ki=8.22, Ki=6nM
    BindingDB: Ki=6.0nM, IC50=1000nM
    3488 1pl0:C (2.6) BS04 BW2 2.1.2.3
    3.5.4.10    		 GO:0003360 ... P31939 14966129 BindingDB: Ki=6.0nM, IC50=1000nM
    3489 1pl0:D (2.6) BS03 BW2 2.1.2.3
    3.5.4.10    		 GO:0003360 ... P31939 14966129 BindingDB: Ki=6.0nM, IC50=1000nM
    3490 1pl6:A (2.0) BS03 572 1.1.1.-
    1.1.1.14
    1.1.1.4
    1.1.1.56
    1.1.1.9    		 GO:0000721 ... Q00796 12962626 MOAD: Ki=154nM
    BindingDB: IC50=246nM
    3491 1pl6:B (2.0) BS03 572 1.1.1.-
    1.1.1.14
    1.1.1.4
    1.1.1.56
    1.1.1.9    		 GO:0000721 ... Q00796 12962626 MOAD: Ki=154nM
    BindingDB: IC50=246nM
    3492 1pl6:C (2.0) BS03 572 1.1.1.-
    1.1.1.14
    1.1.1.4
    1.1.1.56
    1.1.1.9    		 GO:0000721 ... Q00796 12962626 MOAD: Ki=154nM
    BindingDB: IC50=246nM
    3493 1pl6:D (2.0) BS03 572 1.1.1.-
    1.1.1.14
    1.1.1.4
    1.1.1.56
    1.1.1.9    		 GO:0000721 ... Q00796 12962626 MOAD: Ki=154nM
    BindingDB: IC50=246nM
    3494 1pme:A (2.0) BS01 SB2 2.7.11.24 GO:0000165 ... P28482 9827991 MOAD: Ki=0.76nM
    PDBbind: -logKd/Ki=9.40, Ki=0.4nM
    3495 1pmn:A (2.2) BS01 984 2.7.11.24 GO:0004672 ... P53779 12954329 MOAD: ic50=7.1nM
    PDBbind: -logKd/Ki=8.15, IC50=7.1nM
    BindingDB: IC50=1.6nM
    3496 1pmu:A (2.7) BS01 9HP 2.7.11.24 GO:0004672 ... P53779 12954329 PDBbind: -logKd/Ki=6.23, IC50=590nM
    BindingDB: IC50=590nM
    3497 1pmv:A (2.5) BS01 537 2.7.11.24 GO:0004672 ... P53779 12954329 MOAD: ic50=150nM
    PDBbind: -logKd/Ki=6.82, IC50=150nM
    BindingDB: IC50=190nM, Kd=22nM
    3498 1po6:A (2.1) BS01 dna ? GO:0003676 ... P09651 12904298 PDBbind: Kd=157nM
    3499 1pot:A (1.8) BS01 SPD ? GO:0015846 ... P0AFK9 8897598 MOAD: Kd=3.2uM
    PDBbind: -logKd/Ki=5.49, Kd=3.2uM
    3500 1poy:1 (2.5) BS01 SPD ? GO:0015846 ... P0AFK9 8621624 MOAD: Kd=3.2uM
    3501 1poy:2 (2.5) BS01 SPD ? GO:0015846 ... P0AFK9 8621624 MOAD: Kd=3.2uM
    3502 1poy:3 (2.5) BS01 SPD ? GO:0015846 ... P0AFK9 8621624 MOAD: Kd=3.2uM
    3503 1poy:4 (2.5) BS01 SPD ? GO:0015846 ... P0AFK9 8621624 MOAD: Kd=3.2uM
    3504 1pp8:F (3.05) BS01 dna ? N/A Q95VR4 14622596 PDBbind: Kd=190nM
    3505 1pp8:F (3.05) BS02 dna ? N/A Q95VR4 14622596 PDBbind: Kd=190nM
    3506 1pp8:M (3.05) BS01 dna ? N/A Q95VR4 14622596 PDBbind: Kd=190nM
    3507 1pp8:M (3.05) BS02 dna ? N/A Q95VR4 14622596 PDBbind: Kd=190nM
    3508 1pp8:P (3.05) BS01 dna ? N/A Q95VR4 14622596 PDBbind: Kd=190nM
    3509 1pp8:P (3.05) BS02 dna ? N/A Q95VR4 14622596 PDBbind: Kd=190nM
    3510 1pp8:U (3.05) BS01 dna ? N/A Q95VR4 14622596 PDBbind: Kd=190nM
    3511 1pp8:U (3.05) BS02 dna ? N/A Q95VR4 14622596 PDBbind: Kd=190nM
    3512 1ppc:E (1.8) BS01 MID 3.4.21.4 GO:0004175 ... P00760 2226434 MOAD: Ki=0.69uM
    PDBbind: -logKd/Ki=6.16, Ki=0.69uM
    BindingDB: Ki=325nM
    3513 1pph:E (1.9) BS02 0ZG 3.4.21.4 GO:0004175 ... P00760 1879520 MOAD: Ki=1.2uM
    PDBbind: -logKd/Ki=5.92, Ki=1.2uM
    BindingDB: Ki=99999999999999nM
    3514 1ppi:A (2.2) BS01 GLC 3.2.1.1 GO:0003824 ... P00690 8193143 PDBbind: -logKd/Ki=5.01, Ki=9.7uM
    3515 1ppi:A (2.2) BS02 GLC 3.2.1.1 GO:0003824 ... P00690 8193143 PDBbind: -logKd/Ki=5.01, Ki=9.7uM
    3516 1ppi:A (2.2) BS03 BGC 3.2.1.1 GO:0003824 ... P00690 8193143 PDBbind: -logKd/Ki=5.01, Ki=9.7uM
    3517 1ppi:A (2.2) BS04 DAF 3.2.1.1 GO:0003824 ... P00690 8193143 PDBbind: -logKd/Ki=5.01, Ki=9.7uM
    3518 1ppk:E (1.8) BS01 IVV 3.4.23.20 GO:0004190 ... P00798 1606144 MOAD: Ki=22nM
    PDBbind: -logKd/Ki=7.66, Ki=22nM
    3519 1ppl:E (1.7) BS01 1Z7 3.4.23.20 GO:0004190 ... P00798 1606144 MOAD: Ki=2.8nM
    PDBbind: -logKd/Ki=8.55, Ki=2.8nM
    3520 1ppm:E (1.7) BS01 0P1 3.4.23.20 GO:0004190 ... P00798 1606144 MOAD: Ki=1600nM
    PDBbind: -logKd/Ki=5.80, Ki=1600nM
    3521 1ppw:A (2.21) BS03 EIP 5.3.3.2 GO:0000287 ... Q46822 15643873 MOAD: ic50~50uM
    PDBbind: -logKd/Ki=4.30, IC50=50uM
    3522 1ppw:B (2.21) BS03 EIP 5.3.3.2 GO:0000287 ... Q46822 15643873 MOAD: ic50~50uM
    3523 1pq3:A (2.7) BS03 S2C 3.5.3.1 GO:0004053 ... P78540 12859189 PDBbind: -logKd/Ki=7.52, Ki=30nM
    3524 1pq6:A (2.4) BS01 965 ? GO:0003677 ... P55055 12819202 PDBbind: -logKd/Ki=8.10, IC50=7.94nM
    BindingDB: EC50=40.0nM, IC50=23nM, Ki=2.2nM
    3525 1pq6:B (2.4) BS01 965 ? GO:0003677 ... P55055 12819202 BindingDB: EC50=40.0nM, IC50=23nM, Ki=2.2nM
    3526 1pq6:D (2.4) BS01 965 ? GO:0003677 ... P55055 12819202 BindingDB: EC50=40.0nM, IC50=23nM, Ki=2.2nM
    3527 1pqc:A (2.8) BS01 444 ? GO:0003677 ... P55055 12819202 PDBbind: -logKd/Ki=7.00, IC50=0.1uM
    BindingDB: IC50=9nM, EC50=170nM, Ki=41nM, Kd=103nM
    3528 1pqc:B (2.8) BS01 444 ? GO:0003677 ... P55055 12819202 BindingDB: IC50=9nM, EC50=170nM, Ki=41nM, Kd=103nM
    3529 1pqc:C (2.8) BS01 444 ? GO:0003677 ... P55055 12819202 BindingDB: IC50=9nM, EC50=170nM, Ki=41nM, Kd=103nM
    3530 1pqc:D (2.8) BS01 444 ? GO:0003677 ... P55055 12819202 BindingDB: IC50=9nM, EC50=170nM, Ki=41nM, Kd=103nM
    3531 1pr1:A (2.3) BS02 FMB 2.4.2.1 GO:0003824 ... P0ABP9 12937174 MOAD: Ki=5uM
    PDBbind: -logKd/Ki=5.30, Ki=5uM
    3532 1pr1:B (2.3) BS02 FMB 2.4.2.1 GO:0003824 ... P0ABP9 12937174 MOAD: Ki=5uM
    3533 1pr1:C (2.3) BS02 FMB 2.4.2.1 GO:0003824 ... P0ABP9 12937174 MOAD: Ki=5uM
    3534 1pr5:A (2.5) BS02 TBN 2.4.2.1 GO:0003824 ... P0ABP9 12937174 MOAD: Ki=120uM
    PDBbind: -logKd/Ki=3.92, Ki=120uM
    3535 1pr5:B (2.5) BS02 TBN 2.4.2.1 GO:0003824 ... P0ABP9 12937174 MOAD: Ki=120uM
    3536 1pr5:C (2.5) BS02 TBN 2.4.2.1 GO:0003824 ... P0ABP9 12937174 MOAD: Ki=120uM
    3537 1pro:A (1.8) BS01 A88 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P12499 8558507 MOAD: Ki=5pM
    PDBbind: -logKd/Ki=11.30, Ki=5pM
    3538 1pro:B (1.8) BS01 A88 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P12499 8558507 PDBbind: -logKd/Ki=11.30, Ki=5pM
    3539 1ps3:A (1.8) BS02 KIF 3.2.1.114 GO:0000139 ... Q24451 14636047 MOAD: Ki=5.2mM
    PDBbind: -logKd/Ki=2.28, Ki=5.2mM
    3540 1pu7:A (1.93) BS01 39A ? GO:0003824 ... O25323 14517230 MOAD: Ki=0.8mM
    PDBbind: -logKd/Ki=3.10, Ki=0.8mM
    3541 1pu7:B (1.93) BS01 39A ? GO:0003824 ... O25323 14517230 MOAD: Ki=0.8mM
    3542 1pu8:A (2.13) BS01 EA1 ? GO:0003824 ... O25323 14517230 MOAD: Ki=0.8mM
    PDBbind: -logKd/Ki=3.10, Ki=0.8mM
    3543 1pu8:B (2.13) BS01 EA1 ? GO:0003824 ... O25323 14517230 MOAD: Ki=0.8mM
    3544 1puf:A (1.9) BS01 dna ? GO:0000981 ... P09631 12923056 PDBbind: Kd=0.23uM
    3545 1puf:A (1.9) BS02 dna ? GO:0000981 ... P09631 12923056 PDBbind: Kd=0.23uM
    3546 1puf:B (1.9) BS01 dna ? GO:0000981 ... P40424 12923056 PDBbind: Kd=0.23uM
    3547 1puf:B (1.9) BS02 dna ? GO:0000981 ... P40424 12923056 PDBbind: Kd=0.23uM
    3548 1pun:A (-1.00) BS02 8OG 3.6.1.55 GO:0000287 ... P08337 12939141 PDBbind: -logKd/Ki=7.28, Kd=52nM
    3549 1puq:A (-1.00) BS02 8OG 3.6.1.55 GO:0000287 ... P08337 12939141 PDBbind: -logKd/Ki=7.28, Kd=52nM
    3550 1pus:A (-1.00) BS02 8OG 3.6.1.55 GO:0000287 ... P08337 12939141 PDBbind: -logKd/Ki=7.28, Kd=52nM
    3551 1pvn:A (2.0) BS01 MZP 1.1.1.205 GO:0003824 ... P50097 12549902 MOAD: Ki=0.15nM
    PDBbind: -logKd/Ki=9.82, Ki=0.15nM
    3552 1pvn:B (2.0) BS01 MZP 1.1.1.205 GO:0003824 ... P50097 12549902 MOAD: Ki=0.15nM
    PDBbind: -logKd/Ki=9.82, Ki=0.15nM
    3553 1pvn:C (2.0) BS01 MZP 1.1.1.205 GO:0003824 ... P50097 12549902 MOAD: Ki=0.15nM
    3554 1pvn:D (2.0) BS01 MZP 1.1.1.205 GO:0003824 ... P50097 12549902 MOAD: Ki=0.15nM
    3555 1pw6:A (2.6) BS01 FRB ? GO:0002250 ... P60568 14664558 BindingDB: Kd=55nM
    3556 1pw6:B (2.6) BS01 FRB ? GO:0002250 ... P60568 14664558 BindingDB: Kd=55nM
    3557 1pwl:A (1.1) BS01 BFI 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 15146479 BindingDB: IC50=25nM, Kd=5.5nM
    3558 1pwm:A (0.92) BS02 FID 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 15146479 BindingDB: IC50=35nM, Kd=16nM
    3559 1pwp:A (2.9) BS02 NSC 3.4.24.83 GO:0003824 ... P15917 14718925 PDBbind: -logKd/Ki=6.30, Ki=0.5uM
    BindingDB: Ki=500nM, IC50=3200nM
    3560 1pwp:B (2.9) BS02 NSC 3.4.24.83 GO:0003824 ... P15917 14718925 BindingDB: Ki=500nM, IC50=3200nM
    3561 1pwq:A (3.52) BS02 SD2 3.4.24.83 GO:0003824 ... P15917 14718924 PDBbind: -logKd/Ki=4.96, Ki=11uM
    3562 1pwu:A (2.7) BS02 GM6 3.4.24.83 GO:0003824 ... P15917 14718924 PDBbind: -logKd/Ki=5.68, Ki=2.1uM
    3563 1pwy:E (2.8) BS01 AC2 2.4.2.1 GO:0000255 ... P00491 12914786 PDBbind: -logKd/Ki=4.05, Ki=90uM
    BindingDB: Ki=180000nM
    3564 1px2:A (2.23) BS02 ATP ? GO:0005524 ... P09951 14688264 MOAD: Kd=120nM
    3565 1px2:B (2.23) BS02 ATP ? GO:0005524 ... P09951 14688264 MOAD: Kd=120nM
    3566 1px4:A (1.6) BS03 IPT 3.2.1.23 GO:0000287 ... P00722 14621996 MOAD: Ki=0.59mM
    PDBbind: -logKd/Ki=3.23, Ki=0.59mM
    BindingDB: Ki=7.6e+4nM
    3567 1px4:B (1.6) BS03 IPT 3.2.1.23 GO:0000287 ... P00722 14621996 MOAD: Ki=0.59mM
    BindingDB: Ki=7.6e+4nM
    3568 1px4:C (1.6) BS03 IPT 3.2.1.23 GO:0000287 ... P00722 14621996 MOAD: Ki=0.59mM
    BindingDB: Ki=7.6e+4nM
    3569 1px4:D (1.6) BS03 IPT 3.2.1.23 GO:0000287 ... P00722 14621996 MOAD: Ki=0.59mM
    PDBbind: -logKd/Ki=3.23, Ki=0.59mM
    BindingDB: Ki=7.6e+4nM
    3570 1pxd:A (1.8) BS02 SFP ? GO:0005575 ... P18670 14747704 MOAD: Ka=6500M^-1
    3571 1pxh:A (2.15) BS01 SNA 3.1.3.48 GO:0004725 ... P18031 12547827 PDBbind: -logKd/Ki=8.74, Ki=1.8nM
    3572 1pxi:A (1.95) BS01 CK1 2.7.11.22 GO:0000082 ... P24941 12679018 PDBbind: -logKd/Ki=4.77, IC50=17uM
    3573 1pxj:A (2.3) BS01 CK2 2.7.11.22 GO:0000082 ... P24941 12679018 PDBbind: -logKd/Ki=4.89, IC50=13uM
    BindingDB: Ki=6500nM, Kd=30300nM, IC50=6.50e+3nM, kon=8.22E+04M-1-s-1, koff=1.42E+00s-1
    3574 1pxk:A (2.8) BS01 CK3 2.7.11.22 GO:0000082 ... P24941 12679018 PDBbind: -logKd/Ki=5.66, IC50=2.2uM
    3575 1pxl:A (2.5) BS01 CK4 2.7.11.22 GO:0000082 ... P24941 12679018 PDBbind: -logKd/Ki=6.05, IC50=0.9uM
    BindingDB: IC50=2.9e+2nM, Ki=290nM
    3576 1pxm:A (2.53) BS01 CK5 2.7.11.22 GO:0000082 ... P24941 15027857 PDBbind: -logKd/Ki=7.22, Ki=0.06uM
    BindingDB: Ki=60nM
    3577 1pxn:A (2.5) BS01 CK6 2.7.11.22 GO:0000082 ... P24941 15027857 MOAD: Ki=0.07uM
    PDBbind: -logKd/Ki=7.15, Ki=0.07uM
    BindingDB: Ki=70nM
    3578 1pxo:A (1.96) BS01 CK7 2.7.11.22 GO:0000082 ... P24941 15027857 MOAD: Ki=2nM
    PDBbind: -logKd/Ki=8.70, Ki=2.0nM
    BindingDB: IC50=10.0nM, Ki=2nM
    3579 1pxp:A (2.3) BS01 CK8 2.7.11.22 GO:0000082 ... P24941 15027857 MOAD: Ki=0.22uM
    PDBbind: -logKd/Ki=6.66, Ki=0.22uM
    BindingDB: IC50=2.2e+2nM, Ki=220nM
    3580 1pxx:A (2.9) BS02 DIF 1.14.99.1 GO:0004601 ... Q05769 12925531 BindingDB: IC50=22nM
    3581 1pxx:B (2.9) BS02 DIF 1.14.99.1 GO:0004601 ... Q05769 12925531 BindingDB: IC50=22nM
    3582 1pxx:C (2.9) BS02 DIF 1.14.99.1 GO:0004601 ... Q05769 12925531 BindingDB: IC50=22nM
    3583 1pxx:D (2.9) BS02 DIF 1.14.99.1 GO:0004601 ... Q05769 12925531 BindingDB: IC50=22nM
    3584 1py2:A (2.8) BS01 FRH ? GO:0002250 ... P60568 14664558 PDBbind: -logKd/Ki=7.22, IC50=0.06uM
    3585 1py5:A (2.3) BS01 PY1 2.7.11.30 GO:0004672 ... P36897 15177479 MOAD: ic50=51nM
    PDBbind: -logKd/Ki=7.29, IC50=51nM
    BindingDB: IC50=51nM, Kd=5nM
    3586 1pye:A (2.0) BS01 PM1 2.7.11.22 GO:0000082 ... P24941 14749470 MOAD: Ki=386nM
    PDBbind: -logKd/Ki=6.41, Ki=386nM
    BindingDB: IC50=324nM
    3587 1pyg:A (2.87) BS01 AMP 2.4.1.1 GO:0000166 ... P00489 1962195 PDBbind: -logKd/Ki=5.52, Kd=3uM
    3588 1pyg:A (2.87) BS03 AMP 2.4.1.1 GO:0000166 ... P00489 1962195 PDBbind: -logKd/Ki=5.52, Kd=3uM
    3589 1pyg:B (2.87) BS01 AMP 2.4.1.1 GO:0000166 ... P00489 1962195 PDBbind: -logKd/Ki=5.52, Kd=3uM
    3590 1pyg:B (2.87) BS02 AMP 2.4.1.1 GO:0000166 ... P00489 1962195 PDBbind: -logKd/Ki=5.52, Kd=3uM
    3591 1pyn:A (2.2) BS01 941 3.1.3.48 GO:0004725 ... P18031 12951078 MOAD: Ki=3.2uM
    PDBbind: -logKd/Ki=5.49, Ki=3.2uM
    BindingDB: Ki=3200nM
    3592 1pzg:A (1.6) BS02 A3D 1.1.1.27 GO:0000166 ... P90613 14744130 MOAD: Ki=25mM
    3593 1pzg:B (1.6) BS02 A3D 1.1.1.27 GO:0000166 ... P90613 14744130 MOAD: Ki=25mM
    3594 1pzg:C (1.6) BS02 A3D 1.1.1.27 GO:0000166 ... P90613 14744130 MOAD: Ki=25mM
    3595 1pzg:D (1.6) BS02 A3D 1.1.1.27 GO:0000166 ... P90613 14744130 MOAD: Ki=25mM
    3596 1pzi:D (1.99) BS01 1DM ? GO:0005576 ... P32890 14980603 MOAD: Kd=60uM
    PDBbind: -logKd/Ki=4.22, Kd=60uM
    3597 1pzi:E (1.99) BS01 1DM ? GO:0005576 ... P32890 14980603 MOAD: Kd=60uM
    PDBbind: -logKd/Ki=4.22, Kd=60uM
    3598 1pzi:F (1.99) BS01 1DM ? GO:0005576 ... P32890 14980603 MOAD: Kd=60uM
    3599 1pzi:G (1.99) BS01 1DM ? GO:0005576 ... P32890 14980603 MOAD: Kd=60uM
    3600 1pzi:H (1.99) BS01 1DM ? GO:0005576 ... P32890 14980603 MOAD: Kd=60uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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