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I-TASSER results for job id S804953

(Click on S804953_results.tar.bz2 to download the tarball file including all modeling results listed on this page. Click on Annotation of I-TASSER Output to read the instructions for how to interpret the results on this page. Model results are kept on the server for 60 days, there is no way to retrieve the modeling data older than 2 months)

Submitted Sequence in FASTA format

>protein
MGRRRLLVWLCAVAALLSGAQARGTPLLARPAPPGASRYSLYTTGWRPRLRPGPHKALCA
YVVHRNVTCILQEGAESYVKAEYRQCRWGPKCPGTVTYRTVLRPKYKVGYKTVTDLAWRC
CPGFTGKRCPEHLTDHGAASPQLEPEPQIPSGQLDPGPRPPSYSRAAPSPHGRKGPGLFG
ERLERLEGDVQRLAQTYGTLSGLVASHEDPNRMTGGPRAPAVPVGFGVIPEGLVGPGDRA
RGPLTPPLDEILSKVTEVSNTLQTKVQLLDKVHGLALGHEAHLQRLREAPPSPLTSLALL
EEYVDRRLHRLWGSLLDGFEQKLQGVQSECDLRVQEVRRQCEEGQAASRRLHQSLDGREL
ALRQELSQLGSQLQGLSVSGRGSCCGQLALINARMDGLERALQAVTETQRGPGAPAGDEL
TRLSAAMLEGGVDGLLEGLETLNGTEGGARGCCLRLDMGGWGVGGFGTMLEERVQSLEER
LATLAGELSHDSASPGRSARPLVQTELAVLEQRLVSLETSCTPSTTSAILDSLVAEVKAW
QSRSEALLRQVASHAALLQQLNGTVAEVQGQLAEGTGSSLQGEITLLKVNLNSVSKSLTG
LSDSVSQYSDAFLAANTSLDERERKVEAEVQAIQEQVSSQGSRLQAGHRQVLNLRGELEQ
LKAGVAKVASGLSRCQDTAQKLQHTVGHFDQRVAQVEGACRRLGLLAAGLDSLPTEPLRP
REGLWSHVDQLNRTLAQHTQDIARLRDDLLDCQAQLAEQVRPGQAN

Predicted Secondary Structure

Sequence	20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 680 700 720 740 760 \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| MGRRRLLVWLCAVAALLSGAQARGTPLLARPAPPGASRYSLYTTGWRPRLRPGPHKALCAYVVHRNVTCILQEGAESYVKAEYRQCRWGPKCPGTVTYRTVLRPKYKVGYKTVTDLAWRCCPGFTGKRCPEHLTDHGAASPQLEPEPQIPSGQLDPGPRPPSYSRAAPSPHGRKGPGLFGERLERLEGDVQRLAQTYGTLSGLVASHEDPNRMTGGPRAPAVPVGFGVIPEGLVGPGDRARGPLTPPLDEILSKVTEVSNTLQTKVQLLDKVHGLALGHEAHLQRLREAPPSPLTSLALLEEYVDRRLHRLWGSLLDGFEQKLQGVQSECDLRVQEVRRQCEEGQAASRRLHQSLDGRELALRQELSQLGSQLQGLSVSGRGSCCGQLALINARMDGLERALQAVTETQRGPGAPAGDELTRLSAAMLEGGVDGLLEGLETLNGTEGGARGCCLRLDMGGWGVGGFGTMLEERVQSLEERLATLAGELSHDSASPGRSARPLVQTELAVLEQRLVSLETSCTPSTTSAILDSLVAEVKAWQSRSEALLRQVASHAALLQQLNGTVAEVQGQLAEGTGSSLQGEITLLKVNLNSVSKSLTGLSDSVSQYSDAFLAANTSLDERERKVEAEVQAIQEQVSSQGSRLQAGHRQVLNLRGELEQLKAGVAKVASGLSRCQDTAQKLQHTVGHFDQRVAQVEGACRRLGLLAAGLDSLPTEPLRPREGLWSHVDQLNRTLAQHTQDIARLRDDLLDCQAQLAEQVRPGQAN
Prediction	CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Conf.Score	9830578899998531201247899888998887666678888888988899999988724004750258777952131478778968999998663210038744114311066210179999988852122222334767788866402134767775442100102777767788767999999999999999999999999878888777647767677677887877765788999988887777887999999999999999999999999999999999999997998999999999999999999999999999999999999999999999999999999999999999999999999999999999999889889999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999998767799998999999999999999999999999879999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999963632689
	H:Helix; S:Strand; C:Coil

Predicted Solvent Accessibility

Sequence	20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 680 700 720 740 760 \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| MGRRRLLVWLCAVAALLSGAQARGTPLLARPAPPGASRYSLYTTGWRPRLRPGPHKALCAYVVHRNVTCILQEGAESYVKAEYRQCRWGPKCPGTVTYRTVLRPKYKVGYKTVTDLAWRCCPGFTGKRCPEHLTDHGAASPQLEPEPQIPSGQLDPGPRPPSYSRAAPSPHGRKGPGLFGERLERLEGDVQRLAQTYGTLSGLVASHEDPNRMTGGPRAPAVPVGFGVIPEGLVGPGDRARGPLTPPLDEILSKVTEVSNTLQTKVQLLDKVHGLALGHEAHLQRLREAPPSPLTSLALLEEYVDRRLHRLWGSLLDGFEQKLQGVQSECDLRVQEVRRQCEEGQAASRRLHQSLDGRELALRQELSQLGSQLQGLSVSGRGSCCGQLALINARMDGLERALQAVTETQRGPGAPAGDELTRLSAAMLEGGVDGLLEGLETLNGTEGGARGCCLRLDMGGWGVGGFGTMLEERVQSLEERLATLAGELSHDSASPGRSARPLVQTELAVLEQRLVSLETSCTPSTTSAILDSLVAEVKAWQSRSEALLRQVASHAALLQQLNGTVAEVQGQLAEGTGSSLQGEITLLKVNLNSVSKSLTGLSDSVSQYSDAFLAANTSLDERERKVEAEVQAIQEQVSSQGSRLQAGHRQVLNLRGELEQLKAGVAKVASGLSRCQDTAQKLQHTVGHFDQRVAQVEGACRRLGLLAAGLDSLPTEPLRPREGLWSHVDQLNRTLAQHTQDIARLRDDLLDCQAQLAEQVRPGQAN
Prediction	7333200000000000001021221121221221123334232334424434343210001112130103123433313345344031436112302021112030303333134230201012216304332433433344344334434343443434333344433442342243233324303421440453254045314534433433534434333333233223233323433221343242233204402530441353045045314534532442354255435414413440443245113401540354045125404531440354245335424403540552254145315403532463444344524642540453154035414414443541444245234424444245404512541541444254145324404442541452254045214402540450354245444542443354045315403530440344244543443155035314503543440354345145314503541442344345542540352154035414403642540353045135404513540453154045315403541451453145035314503530451354254045415403541450353254045204403531540453154045325404532540352054035404514542450363045135404633464668
	Values range from 0 (buried residue) to 9 (highly exposed residue)

Predicted normalized B-factor

(B-factor is a value to indicate the extent of the inherent thermal mobility of residues/atoms in proteins. In I-TASSER, this value is deduced from threading template proteins from the PDB in combination with the sequence profiles derived from sequence databases. The reported B-factor profile in the figure below corresponds to the normalized B-factor of the target protein, defined by B=(B'-u)/s, where B' is the raw B-factor value, u and s are respectively the mean and standard deviation of the raw B-factors along the sequence. Click here to read more about predicted normalized B-factor)

Top 10 threading templates used by I-TASSER

(I-TASSER modeling starts from the structure templates identified by LOMETS from the PDB library. LOMETS is a meta-server threading approach containing multiple threading programs, where each threading program can generate tens of thousands of template alignments. I-TASSER only uses the templates of the highest significance in the threading alignments, the significance of which are measured by the Z-score, i.e. the difference between the raw and average scores in the unit of standard deviation. The templates in this section are the 10 best templates selected from the LOMETS threading programs. Usually, one template of the highest Z-score is selected from each threading program, where the threading programs are sorted by the average performance in the large-scale benchmark test experiments.)

Rank

PDB
Hit

Iden1

Iden2

Cov

Norm.
Z-score

Download
Align.

                  20                  40                  60                  80                 100                 120                 140                 160                 180                 200                 220                 240                 260                 280                 300                 320                 340                 360                 380                 400                 420                 440                 460                 480                 500                 520                 540                 560                 580                 600                 620                 640                 660                 680                 700                 720                 740                 760
                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |      

Sec.Str
Seq

CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
MGRRRLLVWLCAVAALLSGAQARGTPLLARPAPPGASRYSLYTTGWRPRLRPGPHKALCAYVVHRNVTCILQEGAESYVKAEYRQCRWGPKCPGTVTYRTVLRPKYKVGYKTVTDLAWRCCPGFTGKRCPEHLTDHGAASPQLEPEPQIPSGQLDPGPRPPSYSRAAPSPHGRKGPGLFGERLERLEGDVQRLAQTYGTLSGLVASHEDPNRMTGGPRAPAVPVGFGVIPEGLVGPGDRARGPLTPPLDEILSKVTEVSNTLQTKVQLLDKVHGLALGHEAHLQRLREAPPSPLTSLALLEEYVDRRLHRLWGSLLDGFEQKLQGVQSECDLRVQEVRRQCEEGQAASRRLHQSLDGRELALRQELSQLGSQLQGLSVSGRGSCCGQLALINARMDGLERALQAVTETQRGPGAPAGDELTRLSAAMLEGGVDGLLEGLETLNGTEGGARGCCLRLDMGGWGVGGFGTMLEERVQSLEERLATLAGELSHDSASPGRSARPLVQTELAVLEQRLVSLETSCTPSTTSAILDSLVAEVKAWQSRSEALLRQVASHAALLQQLNGTVAEVQGQLAEGTGSSLQGEITLLKVNLNSVSKSLTGLSDSVSQYSDAFLAANTSLDERERKVEAEVQAIQEQVSSQGSRLQAGHRQVLNLRGELEQLKAGVAKVASGLSRCQDTAQKLQHTVGHFDQRVAQVEGACRRLGLLAAGLDSLPTEPLRPREGLWSHVDQLNRTLAQHTQDIARLRDDLLDCQAQLAEQVRPGQAN

6r9tA

0.11

0.19

1.00

2.01

Download

EDRAQVVSNLKGISMSSSKLLLAAKALSTDPAAPNLKSQLAAAARATMCTQQAPGQKECDNALRETVRELLENPVQPINDMSYFGCMENSKVLGEAMTGISQNAKNGNLPELVGVSDPNSQAGQQGLVEPTQFARANQAIQMACQSLGEPQAQVLSAATIVAKHTSALCNSCRLASARTPTAKRQFVQSAKEVANSTANLVKTIKALENRAQCRAATAPLLEAVDNLSAFASNPEFSPEGRAAMEPIVISAKTMLESAGGLIQTARALAVNPPPSWSVLAGHSRTVSDSIKKLITSMRDKAQLECETAIAALNSCLRDLDQASLAAVSQQEALHTQMLTAVQEISHLIEPLANAARAEASQLGHKVSQMAQYFEPLTLAAVGAASKSHPQQMALLDQTKTLAESALQLLYTAKEAGNPKQAAHTQEALEEAVQMMTEAVEDLTTTLNEAASAAGVVGGMVDSITQAINQLDEGFVDYQTTMVRTAKAIAVTVQEMVTKSNTSPEELGPLANQLTSDYGRLASEAKPAAVAAENEEIGSHIKHRVQELGHGCAALVTKAGALQCSPSAYTKKELIECARRVSEKVSHVLAALQAGNQACITAASAVSGIIADLDTTIMFATAGTETFADHREGILKTAKVLVEDTKVLVQNAAGSQEKLAQAAQSSVATITRLADVVKLGAASPETQVVLINAVKDVAKALGDLISATKAADPAVWQLKNSAKVMVTNVTSLLKTVKAVEDEATKGTRALEATTEHIRQELAVFCSP

7wb4B

0.09

0.17

0.75

1.50

Download

-------------------------------------------------------------------------------------------------------------------------------------QQNRHIGFSWGPGDLLLYETLYQKQGNSETRCPFMYLVRSDE---------------DIYSPVLRKLFNESHSIFVGLQKSAEE------ASGKSRKAQLVQVSRNYRSVLRACMEEMHTLSESTRETAQKYISQISILSAMELSWNLCEILFIESAPAG--------PLLILLLEWVRLHEVDNIVQDVLRSEK--PTEHEKFWDGVTGYVLQMNEARQLLAKEASTSASARSMCRVLDDLLKKMPMLHGTQTLTEFELKWQHWREECERHLQNGTFSSNVHMEAVCRVLL-GDEEVLLEKRDLMTTW------YHFLVSRLLFKHPTVKP---------TELHFYAQSSLDMFLAGDSCPEPLDNILLAAFEFDIHQVIKEFSIVWFVAHLTDLLDHANMREFLLLDYASGLFSHWQLGVDYFDYCPNLGREYLKLHMERTEKKALKALRICEQQMT--EQVRSICKTMAMQSLCNLGSALSWSIRAAAFATLISDRFLKEYCERLDLIDNLGSAMLLS--DRLTFLGKYREFHRMYSQ--EQFSEAASLLLSLMTALTLLLDALPLLEEQTYELMRCLEDRMAAKLESTSPDEIQKQDSSIDNTKVEMLRLALARNLARAIVTEG-----

7kog

0.13

0.20

0.75

1.71

Download

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------EEEM-RKLEELVATTQAALEKEEKARKEVLRNLEGIQEKAAKLQAQKSDLES--------QLMDTERLQQ--EEDNRNKLEQEVGGLKKDIEDLEHQIRNLNDEIAHQDELINKLNKKKMQHTKTAEELQA-SEDKVNHLTKVK-AKLEQTLDELEDKVEGDLKLTQEAVADLEREIASLTAKLEDEQSKTQKQIKELQSRIEELEEVERGKAEKQRADLARELEELGERLEEAGGAQIELNKKREAEMSK-----LRRDLEESNIQHETLANLRKKHNDAVSEMGEQLNATEKIAKQLQHQVNEIQGKLEEAESQVSQLSRLADLGKFRNLEHDLDNIREQLEEEAEGKADWRTKYESELEEAKRKALEKTKQRLATEVEDLQLEVDRATGAYEEAQEQLEVRRMKKLEADINELEIALDHANKANSEAQKTIKKYQQQLKDVQTALEEEANALQNELEESRTLLEQAEQELGDAHEQINKLEGELQTLHADLDELLNEAKELQIRLDEGKKAIAKLEQRVRELENELDGEQRRHADAQKNLRKSERRIKELSFQADEDRKNHERMQDLVDKLQQKIKTYKRQIEEAEEIAALN

7kog

0.13

0.20

0.83

1.32

Download

---------------------------------------------------------------------------------------------------------------------------------EEEMRKLEELVATTQAALEKENAKLIQEKTDLLRNLEGTQQQEEDNRNQMFQQKKKLEQEVGGLKKDIEDLELSLQKSDQDKASKDHQKEKKMQGEHTQKTAEELQASEDKVNHLTKVKAKLEQTLDELQEAVADLERNKKELEQTIQRKDKEIASLTAKIKELQSRIEELEEDLARELEELGERLMSKLRRDLEESNIQHESTLANLRKKHNDAVSEMGHVQNDLNNTAKQLQHQVNEIQGKLDEANRTLNKKLSIENSDLLRQLEEAESQVSQLSKIKVSLTTQLEDTKRLADFRNLEHDLDNIREQLQELEEAKRKLQARLAEAEETIESLNQKVIALEKTKQRLATEVEDLQLEVDRATAIANAAEKKAIDKIIGEWKLKVDDLASQKECRNYSTELKNLADEVKDLLDQIGEGGRNIHEIEKQKKRLEVEKDELQAALEERMKKKLEADINELEIALDHANKANSEAQKTIKKYQQQLKDVQTALEEERRQAEQELGDAHEQINELAAQATSASAAKRKLEGELQTLHADLDELLNEAKNSEKLRKALETQIKELQIRLDKLEQRVRELENELDGAQKNLRKSERRIKELSFQADEDRKNHERMQDLVDKLQQKIKTYKRQIEEAEEIAALN

7ogtA

0.10

0.14

0.83

2.67

Download

---------------------------------------------------------------------------------------------------------------------------------KEELTDKLSALNSEISSLKGKINNEMKSLQRSKSSFVKESAVISKQKSKLDYIFKDKEKLVSDLRLIKVPQQAAGKRISHIEKRIESLQKDLQRQKTYVERFETQLKVVTRSKEAFEEEIKQSARNYLNENDLKTYNCLHEKYLTEGGSILEEKIAVLNNDKREIQEELERFNKRADISKRRITEELSITGEKLDTQLNDLRVSLNEKNALHTERLHELKKLQSDIESANNQEYDLNFKLRETLVKIDDLSNQRETMKERKLRENIAMLKRFFPGVKGLVHDLCHKYGLAVSTILGKNFDSVIVENLTVAQECIAFLKKQRDTIETELPTLSLPDSQDYILSINAIDYEPEYEKAMQYVCGDSAGLMTGGISGDANNRWDKEEYQSLMSLKDKLLIQIDELSNGQRSNSIRAREVENSVSLLNSDIANLRTQVTQQKRSLDENRLEIKYHNDLIEKEIQPKITELKKKLDDLENTKDNLVKEKEALQNNIFKEGFTIKEYENHSGELMRQQSKELQQLQKQILTVENKLQFETDRLSTTQRRYEKAQKDLENAQVEMKSLEEQEYAIEMKIGSIESKLEEHKNHLDELQKKFVTKQSELNSSEDILEDMNSNLQVLKRERDGIKEDIEKFDLERVTA

6z6f

0.00

0.12

0.01

1.45

Download

-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DHCRLFF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

4hpqC

0.12

0.09

0.43

1.15

Download

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NEAVIEKLLENSRKFLTGAKLICQESNDHLTTTKLRIREWQKFQSKLHFVLDCIQQQTKFLSEILVRLVNDMKFWQNEITKMMNKLDNITNEISH----------ILDSKLNEIPTIRKQVENITRQYQTMLAKVQSQLVESRMKGLRDEFS--EEFTNEADQLEQELADFLKSFTDHFDKCSALSSDAQNLFEIVERDDKDLAAINSLLQDAAIDVASFVRKVNMLLDERDADKAKMQATLSKLLTELRKHEEYISVFEGISALIQKFKASCLEDIRQTRNLLDNFERSYHNLLKEVKRRKETAAKLSQILKSCETQLEQINTADLRERQMFLLEN----GN

7t7rA

0.07

0.17

1.00

2.29

Download

LNADCLQRAAEKSSIFELIQEVFAVTKSAHTQQMKAVKQSVLDGTSKWSAKCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLQRFKRESDDFLGQTIIEVRTLSGEMDVWYNLDKRTDKSAVSGAIRLHISVEIKGEEKVAPYHVQYTDVQNNGVVKIPDAKGDDAWKVYYDETAQEIVDEFAMRYGVESIYQAMTHFACLSSKYMCPGVPAVMSTLLANINAYYAHTTASTNVSASDRFAASNFGKERFVKLLDQLHNSLRIDLSMYRNNPERLQDLKSTVDLLTSITFFRMKASQVVKDCVKACLNSTYEYIFNNCHELYGREYQTDPAKKGEVPPEEDFWSKLITLIVSIIEEDKNSYTPCLNQFPQELNVGKISAEVMWSLFAQDMKYAMEEHDKHRLCKSADYMNLHFKVKWLYNEYVAELPTFKDRVPEYPAWFEPFVIQWLDENEEVSRDFLHGALERDKKVVDVFSQLNQSFEIIKQIVGHYMRRFAKTISNVLLQYADIVSKDFASYCSKEKEKVPCILMNNTQQLRVQLEKMFEAM-GGKELDAEASGTLKELQVKLNNVLDELSHVFATSFQPHIEECVRQMGDILSQVKGTGNVPASACSSVAQDADNVLQPIMDLLDSNLTLFAKICEKTVLKRVLKELWKLVMNTMERTIVLPPEFLSKLKDHMVREEAKSLTPKQCAVVELALDTIKQYFHAGGVGLKKTFLEKSPDLQSLRYALSLYTQATDLLIKTFVQTQSAQGSGVEDPVGE

6z9lA

0.11

0.17

0.82

1.58

Download

---------------------------------------------------------------------------------------------------------------------------------------AITEKQQQVTEKQAIVDQKQQVADTAKKEKDAIDQSVKDQQAVVDQNKDALDQSQQAVTDQQAVVDEAKKVVDEPSAIEKAKEQVATDTQAVDEQQKVVDQAQTDVNQQQAVVDEKAKETNAAKVQNEKDQQAVTAAKQEQAKLEELAKNA--EAEKVKAEKEQAAKEAELANKQKEEAKAKDQKTKDDQAVADQQTVVTTSQEKVTDAKADTAAKQADLTAKENALKDKQAATKQAQNTLDNSKEELKGYDTKLSAEEIATLEKTALEMNKNFPTSKEDEKNKDQHLSADQKKELSVYTTELLNDVRKKLDQSIKFAWDIAKYSDTVIAINKAAKENKYTLQESIRKMLVNMSHLHSLLQKEKKEELQQEIASNQEKLATAQQAESDAQQARSASQQALNTAKTTQATAEKELSVHKATLANLQAVATKSTTNYEEKVRQTATAEKSLQQTKDQLATINELIQNRAAVLEKAKTNVAEAQAIEQTSAKVLKEKQEAQKAEENTLNSLKEVLDLAKENLNQKQVALKTSTRSLSRLEN-AQPTYEKALNELNKAEAAVVQAQEAYENSMKSLEELKEQQAVATLAYAQAQEDLSNAKLELQQYQGVLRDLEAQQAEQRRQEALQEQVAKEQ

4fmyA

0.13

0.06

0.22

0.62

Download

----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KNDEQDVELADHDARIAA------------NTKAINILEVRLTTAEGK---------IVVLRSDVDYLLDEVIDIQAHLVTVDQRLDGVESDVSDIKSDYVSKTVTESQSLASPLDVKTSYSVDGIQVVGARQTGWTAATGTPLLGSFNANQSYTVGTTYTQSEVAALATGLEQARQRILALETALRL----------------------------------------------------------------------------------------------------------

(a)	All the residues are colored in black; however, those residues in template which are identical to the residue in the query sequence are highlighted in color. Coloring scheme is based on the property of amino acids, where polar are brightly coloured while non-polar residues are colored in dark shade. (more about the colors used)
(b)	Rank of templates represents the top ten threading templates used by I-TASSER.
(c)	Ident1 is the percentage sequence identity of the templates in the threading aligned region with the query sequence.
(d)	Ident2 is the percentage sequence identity of the whole template chains with query sequence.
(e)	Cov represents the coverage of the threading alignment and is equal to the number of aligned residues divided by the length of query protein.
(f)	Norm. Z-score is the normalized Z-score of the threading alignments. Alignment with a Normalized Z-score >1 mean a good alignment and vice versa.
(g)	Download Align. provides the 3D structure of the aligned regions of the threading templates.
(h)	The top 10 alignments reported above (in order of their ranking) are from the following threading programs:
	1: MUSTER 2: SPARKS-X 3: HHSEARCH2 4: HHSEARCH I 5: Neff-PPAS 6: HHSEARCH 7: pGenTHREADER 8: PROSPECT2 9: SP3 10: FFAS03

Top 5 final models predicted by I-TASSER

(For each target, I-TASSER simulations generate a large ensemble of structural conformations, called decoys. To select the final models, I-TASSER uses the SPICKER program to cluster all the decoys based on the pair-wise structure similarity, and reports up to five models which corresponds to the five largest structure clusters. The confidence of each model is quantitatively measured by C-score that is calculated based on the significance of threading template alignments and the convergence parameters of the structure assembly simulations. C-score is typically in the range of [-5, 2], where a C-score of a higher value signifies a model with a higher confidence and vice-versa. TM-score and RMSD are estimated based on C-score and protein length following the correlation observed between these qualities. Since the top 5 models are ranked by the cluster size, it is possible that the lower-rank models have a higher C-score in rare cases. Although the first model has a better quality in most cases, it is also possible that the lower-rank models have a better quality than the higher-rank models as seen in our benchmark tests. If the I-TASSER simulations converge, it is possible to have less than 5 clusters generated; this is usually an indication that the models have a good quality because of the converged simulations.)

(By right-click on the images, you can export image file or change the configurations, e.g. modifying the background color or stopping the spin of your models)

Download Model 1 C-score=-0.90 (Read more about C-score) Estimated TM-score = 0.60±0.14 Estimated RMSD = 10.4±4.6Å	Download Model 2 C-score = -2.75	Download Model 3 C-score = -3.30	Download Model 4 C-score = -3.07	Download Model 5 C-score = -4.01

Proteins structurally close to the target in the PDB (as identified by TM-align)

(After the structure assembly simulation, I-TASSER uses the TM-align structural alignment program to match the first I-TASSER model to all structures in the PDB library. This section reports the top 10 proteins from the PDB that have the closest structural similarity, i.e. the highest TM-score, to the predicted I-TASSER model. Due to the structural similarity, these proteins often have similar function to the target. However, users are encouraged to use the data in the next section 'Predicted function using COACH' to infer the function of the target protein, since COACH has been extensively trained to derive biological functions from multi-source of sequence and structure features which has on average a higher accuracy than the function annotations derived only from the global structure comparison.)

Top 10 Identified stuctural analogs in PDB

Rank	PDB Hit	TM-score	RMSD^a	IDEN^a	Cov	Alignment
1	6r9tA	0.980	1.54	0.107	1.000	Download
2	7dxjA	0.374	8.63	0.041	0.615	Download
3	5ganA	0.360	8.04	0.062	0.557	Download
4	6bcuA	0.360	8.14	0.034	0.556	Download
5	4i43B	0.357	8.26	0.036	0.561	Download
6	7drrD	0.355	7.87	0.040	0.548	Download
7	7oplA	0.355	8.10	0.045	0.551	Download
8	4ai6A	0.351	8.00	0.040	0.539	Download
9	6xjaP	0.349	8.34	0.037	0.555	Download
10	3cmuA	0.348	8.93	0.048	0.584	Download

(a)	Query structure is shown in cartoon, while the structural analog is displayed using backbone trace.
(b)	Ranking of proteins is based on TM-score of the structural alignment between the query structure and known structures in the PDB library.
(c)	RMSD^a is the RMSD between residues that are structurally aligned by TM-align.
(d)	IDEN^a is the percentage sequence identity in the structurally aligned region.
(e)	Cov represents the coverage of the alignment by TM-align and is equal to the number of structurally aligned residues divided by length of the query protein.

Predicted function using COFACTOR and COACH

(This section reports biological annotations of the target protein by COFACTOR and COACH based on the I-TASSER structure prediction. While COFACTOR deduces protein functions (ligand-binding sites, EC and GO) using structure comparison and protein-protein networks, COACH is a meta-server approach that combines multiple function annotation results (on ligand-binding sites) from the COFACTOR, TM-SITE and S-SITE programs.)

Ligand binding sites

Rank	C-score	Cluster size	PDB Hit	Lig Name	Download Complex	Ligand Binding Site Residues
1	0.08	4	2x2iA	QPS	Rep, Mult	334,338,339
2	0.06	3	3cmxA	ALF	Rep, Mult	365,366,369,370,405
3	0.04	2	2uvaG	FMN	Rep, Mult	346,347,442,446,460,461,462
4	0.04	2	3cmvA	ANP	Rep, Mult	349,350,351,352,405,408,429
5	0.04	2	2uvaI	FMN	Rep, Mult	344,345,346,347,442,462

	Download the residue-specific ligand binding probability, which is estimated by SVM.
	Download the all possible binding ligands and detailed prediction summary.
	Download the templates clustering results.
(a)	C-score is the confidence score of the prediction. C-score ranges [0-1], where a higher score indicates a more reliable prediction.
(b)	Cluster size is the total number of templates in a cluster.
(c)	Lig Name is name of possible binding ligand. Click the name to view its information in the BioLiP database.
(d)	Rep is a single complex structure with the most representative ligand in the cluster, i.e., the one listed in the Lig Name column. Mult is the complex structures with all potential binding ligands in the cluster.

Enzyme Commission (EC) numbers and active sites

Rank	Cscore^EC	PDB Hit	TM-score	RMSD^a	IDEN^a	Cov	EC Number	Active Site Residues
1	0.122	2hpiA	0.321	9.05	0.049	0.552	2.7.7.7	NA
2	0.121	2gv9B	0.337	7.91	0.032	0.509	2.7.7.7	645,666
3	0.115	3btaA	0.308	8.33	0.037	0.488	3.4.24.69	NA
4	0.113	3iayA	0.296	7.94	0.044	0.450	2.7.7.7	NA
5	0.111	1ofdA	0.301	8.42	0.044	0.487	1.4.7.1	NA

	Click on the radio buttons to visualize predicted active site residues.
(a)	Cscore^EC is the confidence score for the EC number prediction. Cscore^EC values range in between [0-1]; where a higher score indicates a more reliable EC number prediction.
(b)	TM-score is a measure of global structural similarity between query and template protein.
(c)	RMSD^a is the RMSD between residues that are structurally aligned by TM-align.
(d)	IDEN^a is the percentage sequence identity in the structurally aligned region.
(e)	Cov represents the coverage of global structural alignment and is equal to the number of structurally aligned residues divided by length of the query protein.

Gene Ontology (GO) terms

Rank	Cscore^GO	TM-score	RMSD^a	IDEN^a	Cov	PDB Hit	Associated GO Terms
Top 10 homologous GO templates in PDB
1	0.29	0.3482	8.93	0.05	0.58	3cmuA	GO:0003697 GO:0048870 GO:0006310 GO:0017111 GO:0009432 GO:0006281 GO:0006950 GO:0003677 GO:0008094 GO:0006974 GO:0000166 GO:0006259 GO:0005737 GO:0005524
2	0.12	0.3370	7.91	0.03	0.51	2gv9B	GO:0006260 GO:0003824 GO:0016787 GO:0004519 GO:0008152 GO:0004518 GO:0016779 GO:0003887 GO:0042025 GO:0004523 GO:0016740 GO:0003677 GO:0000166 GO:0003676 GO:0006139
3	0.12	0.3213	8.57	0.04	0.52	3qmzA	GO:0000166 GO:0003777 GO:0005524 GO:0007018 GO:0016887 GO:0017111 GO:0030286
4	0.11	0.3081	8.33	0.04	0.49	3btaA	GO:0033644 GO:0044156 GO:0005829 GO:0008237 GO:0030666 GO:0044231 GO:0030430 GO:0007269 GO:0046872 GO:0016020 GO:0016787 GO:0008233 GO:0044221 GO:0005576 GO:0009405 GO:0004222 GO:0020002 GO:0044164 GO:0016021 GO:0005886 GO:0006508 GO:0008270 GO:0050827 GO:0051609
5	0.11	0.3077	8.19	0.04	0.48	2x2hA	GO:0016829 GO:0047457 GO:0004553 GO:0005975
6	0.11	0.3004	8.36	0.05	0.48	3cmvA	GO:0005737 GO:0003677 GO:0048870 GO:0008094 GO:0006281 GO:0017111 GO:0006310 GO:0005524 GO:0006950 GO:0006259 GO:0003697 GO:0000166 GO:0009432 GO:0006974
7	0.11	0.3010	8.42	0.04	0.49	1ofdA	GO:0046872 GO:0051536 GO:0005515 GO:0016041 GO:0051538 GO:0055114 GO:0006537 GO:0006541 GO:0008652 GO:0016491 GO:0003824 GO:0006807 GO:0008152 GO:0015930
8	0.11	0.3231	8.82	0.06	0.54	2uvaG	GO:0003824 GO:0004312 GO:0005835 GO:0006633 GO:0008152 GO:0016491 GO:0016740 GO:0055114
9	0.10	0.3120	8.87	0.04	0.52	1llwA	GO:0016491 GO:0046872 GO:0008652 GO:0006541 GO:0051536 GO:0055114 GO:0051538 GO:0016041 GO:0005515 GO:0006537 GO:0003824 GO:0006807 GO:0008152 GO:0015930
10	0.10	0.2607	8.95	0.04	0.44	3nd2A	GO:0000176 GO:0006656 GO:0005515 GO:0005635 GO:0006612 GO:0005087 GO:0005737 GO:0051292 GO:0005643 GO:0005634 GO:0006810 GO:0008565 GO:0006606 GO:0060188 GO:0015031 GO:0005488 GO:0006886

Consensus prediction of GO terms

Molecular Function GO:0042623 GO:0043566 GO:0005524

GO-Score 0.57 0.57 0.37

Biological Process GO:0033554 GO:0031668 GO:0040011 GO:0044260 GO:0006928 GO:0051674 GO:0090304

GO-Score 0.57 0.57 0.57 0.57 0.57 0.57 0.57

Cellular Component GO:0044424

GO-Score 0.57

(a) Cscore^GO is a combined measure for evaluating global and local similarity between query and template protein. It's range is [0-1] and higher values indicate more confident predictions.

(b) TM-score is a measure of global structural similarity between query and template protein.

(c) RMSD^a is the RMSD between residues that are structurally aligned by TM-align.

(d) IDEN^a is the percentage sequence identity in the structurally aligned region.

(e) Cov represents the coverage of global structural alignment and is equal to the number of structurally aligned residues divided by length of the query protein.

(f) The second table shows a consensus GO terms amongst the top scoring templates. The GO-Score associated with each prediction is defined as the average weight of the GO term, where the weights are assigned based on Cscore^GO of the template.

[Click on S804953_results.tar.bz2 to download the tarball file including all modeling results listed on this page]

Please cite the following articles when you use the I-TASSER server:

Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. Cell Reports Methods, 1: 100014 (2021).
Chengxin Zhang, Peter L. Freddolino, and Yang Zhang. COFACTOR: improved protein function prediction by combining structure, sequence and protein-protein interaction information. Nucleic Acids Research, 45: W291-299 (2017).
Jianyi Yang, Yang Zhang. I-TASSER server: new development for protein structure and function predictions, Nucleic Acids Research, 43: W174-W181, 2015.