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I-TASSER results for job id S804743

(Click on S804743_results.tar.bz2 to download the tarball file including all modeling results listed on this page. Click on Annotation of I-TASSER Output to read the instructions for how to interpret the results on this page. Model results are kept on the server for 60 days, there is no way to retrieve the modeling data older than 2 months)

Submitted Sequence in FASTA format

>protein
MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF

Predicted Secondary Structure

Sequence	20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Prediction	CCCCCCSSSSSCCCCSSSSSSCCCCCCCSSCCCSSSSCCCCCCCCCCCCCCCCCCHHHHHCCCCCSSCCCCCCCCSSCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHSSSHHHHHHHHHHCCCCCSSSCCCCCSSSSSSSSCCCSSSSSSSSSSCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCSSSSSCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCSSSCCCCCSSSCHHHHHHHHHHHHCCCCCCSSSCCCCCCCSSSHHHHHHHHCCCCHHHSSSSHHHHHCCCHHHSSSCCC
Conf.Score	999996599999998699999999997551346266513343000124665445420232167523514444783510888888898866542265522477644577631778999999998602687511032033442766177533033478845899986358266522288506668899999987551388877522245433002032210242023444421244310012245433232268773281442132114753455509999999867887898775377785573024066888888999755666513445899867217988999877722752566599984639121140679
	H:Helix; S:Strand; C:Coil

Predicted Solvent Accessibility

Sequence	20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Prediction	764621000000101200000001530221000000102345214436433110042025324303031004301032141102001100233041316511000000011256212100000002130000000000000000011000000002220100000000100100022010002100300240046362403142334104401430000022044115416645423353623413201002000100000020220236130003001200230234024300500000010000430351023004500277040202004302100000000000043035100026104531131013327
	Values range from 0 (buried residue) to 9 (highly exposed residue)

Predicted normalized B-factor

(B-factor is a value to indicate the extent of the inherent thermal mobility of residues/atoms in proteins. In I-TASSER, this value is deduced from threading template proteins from the PDB in combination with the sequence profiles derived from sequence databases. The reported B-factor profile in the figure below corresponds to the normalized B-factor of the target protein, defined by B=(B'-u)/s, where B' is the raw B-factor value, u and s are respectively the mean and standard deviation of the raw B-factors along the sequence. Click here to read more about predicted normalized B-factor)

Top 10 threading templates used by I-TASSER

(I-TASSER modeling starts from the structure templates identified by LOMETS from the PDB library. LOMETS is a meta-server threading approach containing multiple threading programs, where each threading program can generate tens of thousands of template alignments. I-TASSER only uses the templates of the highest significance in the threading alignments, the significance of which are measured by the Z-score, i.e. the difference between the raw and average scores in the unit of standard deviation. The templates in this section are the 10 best templates selected from the LOMETS threading programs. Usually, one template of the highest Z-score is selected from each threading program, where the threading programs are sorted by the average performance in the large-scale benchmark test experiments.)

Rank

PDB
Hit

Iden1

Iden2

Cov

Norm.
Z-score

Download
Align.

                  20                  40                  60                  80                 100                 120                 140                 160                 180                 200                 220                 240                 260                 280                 300                 320                 340                 360
                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |               

Sec.Str
Seq

CCCCCCSSSSSCCCCSSSSSSCCCCCCCSSCCCSSSSCCCCCCCCCCCCCCCCCCHHHHHCCCCCSSCCCCCCCCSSCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHSSSHHHHHHHHHHCCCCCSSSCCCCCSSSSSSSSCCCSSSSSSSSSSCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCSSSSSCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCSSSCCCCCSSSCHHHHHHHHHHHHCCCCCCSSSCCCCCCCSSSHHHHHHHHCCCCHHHSSSSHHHHHCCCHHHSSSCCC
MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF

3eksA

0.98

0.97

1.00

3.16

Download

-DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTEEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELKDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF

7p1gC

0.94

0.93

0.99

3.18

Download

----TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF

3eks

0.98

0.97

1.00

2.08

Download

-DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTEEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELKDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF

6kw5

0.22

0.23

0.95

1.63

Download

-TLNRKCVVIHNGSHRTVAGFSNVELPQCIIPSSYIKRTEA---------EFIFGTYNMIKRNGDEVYTLVDSGLPYNWDALEMQWRYLYDTQLKVSPEELPLVITMPATNGMAILERYYELAFDKLNVPVFQIVIEPLAIALSMGKSSAFVIDIGASGCNVTPIIDGIVVKNAVVRSKFGGDFLDFQVHERLAPLIKEEQSYEASTWIQQFKSTMLQVSEKDLFELERYYNPLVQKKNFLFKPLKTLTLLKECYQFAEYLFKPQLIFSPEDGLGPLMAKSVKKAGASVYSLLLTNVIITGSTSLIEGMEQRIIKELSIRFPQ-YKLTTFANQDRKIQGWLGALTMANLPSWSGKWYSKEDYETLKRD-------

3eksA

0.98

0.97

1.00

4.75

Download

-DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTEEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELKDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF

3eks

0.98

0.97

0.99

2.40

Download

-DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTEEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELKDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC-

6f1tH

1.00

0.99

8.88

Download

-----AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF

7nxvA

0.94

0.93

0.99

2.95

Download

--DETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF

1j6zA

0.93

0.92

0.98

6.86

Download

---ETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI-EGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHR---

7nxvA

0.94

0.93

0.99

7.50

Download

--DETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF

(a)	All the residues are colored in black; however, those residues in template which are identical to the residue in the query sequence are highlighted in color. Coloring scheme is based on the property of amino acids, where polar are brightly coloured while non-polar residues are colored in dark shade. (more about the colors used)
(b)	Rank of templates represents the top ten threading templates used by I-TASSER.
(c)	Ident1 is the percentage sequence identity of the templates in the threading aligned region with the query sequence.
(d)	Ident2 is the percentage sequence identity of the whole template chains with query sequence.
(e)	Cov represents the coverage of the threading alignment and is equal to the number of aligned residues divided by the length of query protein.
(f)	Norm. Z-score is the normalized Z-score of the threading alignments. Alignment with a Normalized Z-score >1 mean a good alignment and vice versa.
(g)	Download Align. provides the 3D structure of the aligned regions of the threading templates.
(h)	The top 10 alignments reported above (in order of their ranking) are from the following threading programs:
	1: MUSTER 2: SPARKS-X 3: HHSEARCH2 4: HHSEARCH I 5: Neff-PPAS 6: HHSEARCH 7: pGenTHREADER 8: PROSPECT2 9: SP3 10: FFAS03

Top 5 final models predicted by I-TASSER

(For each target, I-TASSER simulations generate a large ensemble of structural conformations, called decoys. To select the final models, I-TASSER uses the SPICKER program to cluster all the decoys based on the pair-wise structure similarity, and reports up to five models which corresponds to the five largest structure clusters. The confidence of each model is quantitatively measured by C-score that is calculated based on the significance of threading template alignments and the convergence parameters of the structure assembly simulations. C-score is typically in the range of [-5, 2], where a C-score of a higher value signifies a model with a higher confidence and vice-versa. TM-score and RMSD are estimated based on C-score and protein length following the correlation observed between these qualities. Since the top 5 models are ranked by the cluster size, it is possible that the lower-rank models have a higher C-score in rare cases. Although the first model has a better quality in most cases, it is also possible that the lower-rank models have a better quality than the higher-rank models as seen in our benchmark tests. If the I-TASSER simulations converge, it is possible to have less than 5 clusters generated; this is usually an indication that the models have a good quality because of the converged simulations.)

(By right-click on the images, you can export image file or change the configurations, e.g. modifying the background color or stopping the spin of your models)

Download Model 1

C-score=1.22 (Read more about C-score)

Estimated TM-score = 0.88±0.07

Estimated RMSD = 4.1±2.8Å

Proteins structurally close to the target in the PDB (as identified by TM-align)

(After the structure assembly simulation, I-TASSER uses the TM-align structural alignment program to match the first I-TASSER model to all structures in the PDB library. This section reports the top 10 proteins from the PDB that have the closest structural similarity, i.e. the highest TM-score, to the predicted I-TASSER model. Due to the structural similarity, these proteins often have similar function to the target. However, users are encouraged to use the data in the next section 'Predicted function using COACH' to infer the function of the target protein, since COACH has been extensively trained to derive biological functions from multi-source of sequence and structure features which has on average a higher accuracy than the function annotations derived only from the global structure comparison.)

Top 10 Identified stuctural analogs in PDB

Rank	PDB Hit	TM-score	RMSD^a	IDEN^a	Cov	Alignment
1	3eksA	0.993	0.48	0.976	0.997	Download
2	3buzB	0.933	1.28	0.931	0.960	Download
3	6i4eA	0.913	1.13	0.838	0.936	Download
4	2p9iA	0.898	2.35	0.385	0.976	Download
5	4fo0A	0.897	2.21	0.216	0.963	Download
6	3qb0A	0.896	2.25	0.315	0.968	Download
7	5aftA	0.888	2.40	0.526	0.971	Download
8	4am6A	0.882	2.40	0.212	0.955	Download
9	6gejR	0.872	2.42	0.238	0.952	Download
10	6w17B	0.871	2.12	0.483	0.939	Download

(a)	Query structure is shown in cartoon, while the structural analog is displayed using backbone trace.
(b)	Ranking of proteins is based on TM-score of the structural alignment between the query structure and known structures in the PDB library.
(c)	RMSD^a is the RMSD between residues that are structurally aligned by TM-align.
(d)	IDEN^a is the percentage sequence identity in the structurally aligned region.
(e)	Cov represents the coverage of the alignment by TM-align and is equal to the number of structurally aligned residues divided by length of the query protein.

Predicted function using COFACTOR and COACH

(This section reports biological annotations of the target protein by COFACTOR and COACH based on the I-TASSER structure prediction. While COFACTOR deduces protein functions (ligand-binding sites, EC and GO) using structure comparison and protein-protein networks, COACH is a meta-server approach that combines multiple function annotation results (on ligand-binding sites) from the COFACTOR, TM-SITE and S-SITE programs.)

Ligand binding sites

Rank	C-score	Cluster size	PDB Hit	Lig Name	Download Complex	Ligand Binding Site Residues
1	0.74	122	1yagA	ATP	Rep, Mult	13,14,15,16,18,156,157,158,159,182,210,213,214,301,302,303,305,306,336
2	0.33	45	1d4x0	PEPTIDE	Rep, Mult	23,24,25,143,144,146,147,148,167,168,169,334,341,345,346,348,349,350,351,354
3	0.23	31	1ijjA	LAR	Rep, Mult	15,16,32,34,59,69,157,183,186,206,207,210,214
4	0.15	21	2asmA	RGA	Rep, Mult	133,139,143,144,145,146,147,168,169,332,334,338,341,345,346,355
5	0.12	16	3mmvA	PEPTIDE	Rep, Mult	23,24,25,146,349,351

	Download the residue-specific ligand binding probability, which is estimated by SVM.
	Download the all possible binding ligands and detailed prediction summary.
	Download the templates clustering results.
(a)	C-score is the confidence score of the prediction. C-score ranges [0-1], where a higher score indicates a more reliable prediction.
(b)	Cluster size is the total number of templates in a cluster.
(c)	Lig Name is name of possible binding ligand. Click the name to view its information in the BioLiP database.
(d)	Rep is a single complex structure with the most representative ligand in the cluster, i.e., the one listed in the Lig Name column. Mult is the complex structures with all potential binding ligands in the cluster.

Enzyme Commission (EC) numbers and active sites

Rank	Cscore^EC	PDB Hit	TM-score	RMSD^a	IDEN^a	Cov	EC Number	Active Site Residues
1	0.883	3cjcA	0.947	1.66	0.925	0.984	3.1.21.1	14,18,29,32,34,54,69,78,80,84,88,90,92,94,122
2	0.318	2nztA	0.616	4.40	0.094	0.784	2.7.1.1	NA
3	0.312	3f9mA	0.624	4.02	0.097	0.773	2.7.1.2	NA
4	0.310	1qhaA	0.616	4.41	0.101	0.789	2.7.1.1	NA
5	0.307	3hm8A	0.613	4.22	0.096	0.776	2.7.1.1	NA

	Click on the radio buttons to visualize predicted active site residues.
(a)	Cscore^EC is the confidence score for the EC number prediction. Cscore^EC values range in between [0-1]; where a higher score indicates a more reliable EC number prediction.
(b)	TM-score is a measure of global structural similarity between query and template protein.
(c)	RMSD^a is the RMSD between residues that are structurally aligned by TM-align.
(d)	IDEN^a is the percentage sequence identity in the structurally aligned region.
(e)	Cov represents the coverage of global structural alignment and is equal to the number of structurally aligned residues divided by length of the query protein.

Gene Ontology (GO) terms

Rank	Cscore^GO	TM-score	RMSD^a	IDEN^a	Cov	PDB Hit	Associated GO Terms
Top 10 homologous GO templates in PDB
1	0.88	0.8963	2.52	0.90	0.98	2y83O	GO:0005884 GO:0006915 GO:0001725 GO:0030240 GO:0005856 GO:0055003 GO:0030048 GO:0031032 GO:0031674 GO:0060047 GO:0005524 GO:0006200 GO:0005515 GO:0005737 GO:0000166 GO:0055008 GO:0017022 GO:0016887 GO:0005865 GO:0042643 GO:0030017 GO:0048741 GO:0007517 GO:0006898 GO:0009792 GO:0040007 GO:0000910 GO:0040035 GO:0000003 GO:0030036 GO:0071688 GO:0002119 GO:0009790 GO:0040039 GO:0048545 GO:0006936 GO:0005200 GO:0030049 GO:0009991 GO:0005829 GO:0016049 GO:0010226 GO:0009612 GO:0015629 GO:0043531 GO:0043503 GO:0042802 GO:0035267 GO:0006457 GO:0051086 GO:0016319 GO:0006911 GO:0005875 GO:0032507 GO:0031011 GO:0002121 GO:0007291 GO:0005623 GO:0005811 GO:0044267 GO:0034329 GO:0045216 GO:0034332 GO:0019901 GO:0050998 GO:0030529 GO:0007596 GO:0043234 GO:0006928 GO:0007409 GO:0070688 GO:0019894 GO:0051084 GO:0030424 GO:0007411
2	0.49	0.9560	1.26	0.94	0.98	1c0fA	GO:0001891 GO:0016192 GO:0032010 GO:0000902 GO:0000910 GO:0006897 GO:0031143 GO:0005524 GO:0005737 GO:0017022 GO:0006935 GO:0042331 GO:0015629 GO:0005856 GO:0005200 GO:0032009 GO:0005515 GO:0006928 GO:0000166 GO:0005884 GO:0006972 GO:0031252
3	0.46	0.9613	1.28	0.88	0.98	1yagA	GO:0031011 GO:0031505 GO:0000123 GO:0006357 GO:0034599 GO:0007119 GO:0000916 GO:0030050 GO:0005515 GO:0000142 GO:0005856 GO:0005524 GO:0032432 GO:0006897 GO:0000132 GO:0005737 GO:0030479 GO:0035267 GO:0006887 GO:0000011 GO:0016573 GO:0001300 GO:0000910 GO:0000001 GO:0000166 GO:0006281 GO:0030476 GO:0000812
4	0.45	0.6817	1.31	0.55	0.70	2p9kB	GO:0005856 GO:0005737 GO:0003779 GO:0005524 GO:0042995 GO:0000166
5	0.43	0.8967	2.24	0.32	0.97	3qb0B	GO:0006357 GO:0005634 GO:0051382 GO:0006351 GO:0000790 GO:0035267 GO:0003682 GO:0031011 GO:0016573 GO:0004402 GO:0006355 GO:0006338 GO:0006325 GO:0006281 GO:0016568 GO:0043140 GO:0006974 GO:0000812 GO:0005515
6	0.42	0.8691	2.84	0.38	0.98	1u2vA	GO:0003779 GO:0005515 GO:0005524 GO:0030030 GO:0030833 GO:0005737 GO:0005856 GO:0060271 GO:0000166 GO:0042995 GO:0030027
7	0.40	0.7372	3.22	0.14	0.85	1jcfA	GO:0000902 GO:0005524
8	0.39	0.7860	3.16	0.39	0.92	3dwlA	GO:0030479 GO:0000147 GO:0005737 GO:0051666 GO:0005856 GO:0000915 GO:0005515 GO:0030833 GO:0003779 GO:0007163 GO:0000166 GO:0005829 GO:0005524 GO:0006897 GO:0034314
9	0.35	0.6981	3.70	0.11	0.84	3d2fA	GO:0005737 GO:0005515 GO:0042026 GO:0000166 GO:0006950 GO:0005516 GO:0042277 GO:0006457 GO:0005524 GO:0005844 GO:0000774
10	0.35	0.6971	3.31	0.12	0.81	2v7yA	GO:0005524 GO:0006457 GO:0051082

Consensus prediction of GO terms

Molecular Function GO:0005524 GO:0005200 GO:0017022 GO:0019901 GO:0042802 GO:0050998 GO:0019894 GO:0043531 GO:0003779 GO:0043140

GO-Score 0.98 0.94 0.94 0.88 0.88 0.88 0.88 0.88 0.45 0.42

Biological Process GO:0040039 GO:0009792 GO:0007291 GO:0055003 GO:0034329 GO:0006915 GO:0009991 GO:0016319 GO:0002121 GO:0007596

GO-Score 0.88 0.88 0.88 0.88 0.88 0.88 0.88 0.88 0.88 0.88

Cellular Component GO:0031011 GO:0035267 GO:0005811 GO:0005829 GO:0042643 GO:0030529 GO:0005875 GO:0070688 GO:0030424 GO:0001725

GO-Score 0.96 0.96 0.88 0.88 0.88 0.88 0.88 0.88 0.88 0.88

(a) Cscore^GO is a combined measure for evaluating global and local similarity between query and template protein. It's range is [0-1] and higher values indicate more confident predictions.

(b) TM-score is a measure of global structural similarity between query and template protein.

(c) RMSD^a is the RMSD between residues that are structurally aligned by TM-align.

(d) IDEN^a is the percentage sequence identity in the structurally aligned region.

(e) Cov represents the coverage of global structural alignment and is equal to the number of structurally aligned residues divided by length of the query protein.

(f) The second table shows a consensus GO terms amongst the top scoring templates. The GO-Score associated with each prediction is defined as the average weight of the GO term, where the weights are assigned based on Cscore^GO of the template.

[Click on S804743_results.tar.bz2 to download the tarball file including all modeling results listed on this page]

Please cite the following articles when you use the I-TASSER server:

Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. Cell Reports Methods, 1: 100014 (2021).
Chengxin Zhang, Peter L. Freddolino, and Yang Zhang. COFACTOR: improved protein function prediction by combining structure, sequence and protein-protein interaction information. Nucleic Acids Research, 45: W291-299 (2017).
Jianyi Yang, Yang Zhang. I-TASSER server: new development for protein structure and function predictions, Nucleic Acids Research, 43: W174-W181, 2015.