Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340
| | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCSCCCCCCCCCSSSSCCCCCCCSSSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCC MAATLGSGERWTEAYIDAVRRNKYPEDTPPESHDPCGCCNCMKAQKEKKSENEWTQTRQGEGNSTYSEEQLLGVQRIKKCRNYYEILGVSRDASDEELKKAYRKLALKFHPDKNCAPGATDAFKAIGNAFAVLSNPDKRLRYDEYGDEQVTFTAPRARPYNYYRDFEADITPEELFNVFFGGHFPTGNIHMFSNVTDDTYYYRRRHRHERTQTQKEEEEEKPQTTYSAFIQLLPVLVIVIISVITQLLATNPPYSLFYKSTLGYTISRETQNLQVPYFVDKNFDKAYRGASLHDLEKTIEKDYIDYIQTSCWKEKQQKSELTNLAGLYRDERLKQKAESLKLENCEKLSKLIGLRRGG |
1 | 6u3rA | 0.42 | 0.13 | 3.77 | 1.37 | FFAS-3D | | -------------------------------------------------------------------------------MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPEEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
2 | 6u3rA | 0.28 | 0.14 | 4.36 | 1.18 | SPARKS-K | | ------------------------------------------------------------------------------GMVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPEEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGSHFDSPFEFGFTFR---NPDDVFREFFGGRDPFSF-------DFFEDPFEDFFGNRRGPRGGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGKEQLLRLDNK-------------------------------------------------------------------------------------- |
3 | 6u3rA | 0.31 | 0.15 | 4.57 | 3.00 | HHsearch | | ------------------------------------------------------------------------------GMVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPEEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSHFPFEFGF-TFRNPDDVFREFFGGRDPFSDFFEDPFED----FFGNRRGP-RGG----------MGNF------------KSISTSTKMVNGTKRIVENVEVEEDGQLKSLTI-NGKEQLL--RLD-NK----------------------------------------------------------------------- |
4 | 1vt4I | 0.06 | 0.06 | 2.66 | 0.57 | CEthreader | | RIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
5 | 6bk8U | 0.08 | 0.07 | 2.69 | 0.87 | EigenThreader | | QFVTDTSIWEDYIRWESSRIFWLFQRCLKSCVRDCDRICLSYLELAIEMIRHALASSLMKMEMHRKVWDPVIKFVEEKVWLFLILSLAKYYIGRLDSCGDLLKKSLQQ--------------FDRIYNFYLLFEQECSQFILGKLKENDDWTEKLQAHMATFESLINLYDIYLNDVALRQDSLVETWMKRVSLQKSAAEKCNVYSEAILKIDPRKVGTPGSFGRLWCSYGDLYWRSNKTKMAYNTVIDLRPHVMESFQVYEKTIP-------LFPPELFEKALKNLCCKTIFIAYSVFEERKAVEFVIKFSDFESSIGE---------------------TIRAREILAYGAKLLPPS |
6 | 6z5nA | 0.43 | 0.12 | 3.61 | 1.37 | FFAS-3D | | --------------------------------------------------------------------------------KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEESGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 4j80A | 0.19 | 0.14 | 4.59 | 1.10 | SPARKS-K | | -----------------------------------------------------------------------------AAKKDYYAILGVPRNATQEEIKRAYKRLARQYHPDVNKSPEAEEKFKEINEAYAV-SDPEKRRIYDTYGTTEAPPPPPPGGYDFSGFDVEDFS---EFFQELFGPGLFGKGRDLRAELPLTLEEAFHGGERVVEVAGRRVSVRPPGVREGSVIRVPGGGQGNPPGDLLLVVRLPHPVFRLEGQDLYATLDVPAPIAVVGGKVRATLEGPVEVAVPPRTQAGRKRLKGGGFPGPAGRGDLYLEVRITIPERLTPEEEALWKKLAEAYYAR------------ |
8 | 5aykA | 0.23 | 0.13 | 4.03 | 0.83 | CNFpred | | --------------------------------------------------------------------------------QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN------------QGGQYESWSYYRYDFGIYDDDPEIITLE-----------------------------RREFDAAVNSGELWFVNFYSPSHDLAPTWREFAKEV---GLLRIGAVNC-PSLFIFRSGMAAVKYNGDR-------SKESLVAFAMQHVRS------------------------TVTELSTGNFVNAIETAFAAG |
9 | 3p8cB | 0.07 | 0.04 | 1.76 | 0.67 | DEthreader | | ---------------------------------------------------------------YNIKKACGDPKPSYLIDNLESAV--QLQKEKS-EILKNLALYYFTFVVLMILLSRIE-ERKAIIGLYNYAHEMTHGA--------------------------SDREYPRLGQMI----------M-EEF----V-PHSKSLSDALLMEKWFLSLFVDIWLLFYAFEKMFQQCLELMKQARNLITDICTEQC-----TLSDQLLPK-----PSELTS-RA--TV--------MRSLSELLGPGMKFLSESLMWHISSQVAELKK-VVES-SVKRMTIIGVILSFRSLAQEADP-- |
10 | 1gosA | 0.06 | 0.06 | 2.61 | 0.89 | MapAlign | | RTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEVERLIHHVKGKSYPFRGPFPPVWNPITYLDHNNFWRTMDEIPSDAPWKAPLAEEWDNMMKELLDKL-C-WTES-AKQLATLFVNLCTHVSA-LWFLWYVKQCGGTTRI---ISTTNGGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYYEEAPVAYTLDDTKPEGNYAAIMGFIKLARLTKEERLKKLCELYAKVLRQPVDRY-FAGTET--AT--HW--SGYMEGAVEA-GER-AAREILHAMGKIPE- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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