Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500
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| SS Seq | CCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCSSSSCCCCCCCCCCCCCCCSSSCCSSSSSSCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCSSSCCCCCCCCCCCCCCCCCSSSSSSSSCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCSSSCCCCCCCCCCCCCCSCCCCCCCCCCCCCCSSSSSSHHHHHHHHHHHHHHHSSSSSSSCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCC MKAIIHLTLLALLSVNTATNQGNSADAVTTTETATSGPTVAAADTTETNFPETASTTANTPSFPTATSPAPPIISTHSSSTIPTPAPPIISTHSSSTIPIPTAADSESTTNVNSLATSDIITASSPNDGLITMVPSETQSNNEMSPTTEDNQSSGPPTGTALLETSTLNSTGPSNPCQDDPCADNSLCVKLHNTSFCLCLEGYYYNSSTCKKGKVFPGKISVTVSETFDPEEKHSMAYQDLHSEITSLFKDVFGTSVYGQTVILTVSTSLSPRSEMRADDKFVNVTIVTILAETTSDNEKTVTEKINKAIRSSSSNFLNYDLTLRCDYYGCNQTADDCLNGLACDCKSDLQRPNPQSPFCVASSLKCPDACNAQHKQCLIKKSGGAPECACVPGYQEDANGNCQKCAFGYSGLDCKDKFQLILTIVGTIAGIVILSMIIALIVTARSNNKTKHIEEENLIDEDFQNLKLRSTGFTNLGAEGSVFPKVRITASRDSQMQNPYSRHSSMPRPDY |
1 | 3gawA | 0.10 | 0.09 | 3.15 | 1.27 | SPARKS-K | | CSESFTMIGHRSITCIHGVWTQLPQCVAIDKLKKCKSSNLII-LEEHLKNKKEFDHNSNIRYRCRGKEGWIHTDPEVNCSMAQIQLCPPPPQIPNSHNMTTTLNYRDGEKQENYLIQEGEEITCKDGRWQSIPLCVEKISQPPQIEHGTINSSRSSQESYAHGTKLSYTCESSPPQCEGLPCKSHGVVAHMSDSYTYKCFEGFGIDGPA---------IAKCLGEKPPSCIKTDCL-----------------SLPSFEN---AIPMGEKKDVYKAGE-------QVTYTCATYYKMDGANV---------TCINSRW--TGRPTCRDTSCVNPPTV-QNAVRYQCRSPYEMFGDEEVMCLNGNWTEPPQCKDSTGKCGITSFASSVEYQCQNLYQLEGNKRCRNGQ--WSEPPCVIS--------------------------------------REIMENYNIALRWTAKQKLYSRTGESVEFVCKRLSSRSHTLRTTCWDGKEYPTCAK |
2 | 1z1yA | 0.20 | 0.06 | 1.94 | 1.09 | CNFpred | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDTICM-NGQLVQMSNHFMCMCNEGLVHLSNTCEEMNETLGMACGE------------------------------------FGQCIENPD---------AQVNMYMCGCIEGYTLM-----------------------EDTCVLDVCQYMNCGE-SGECIVSAGCSCAIGMVPNPEDEMMCTMTGTACQLMCNTDNEVCMNVE--GVYMCQCMEGFTFDMMNVCLG----------------------------------------------------------------------------------------------------------- |
3 | 1vt4I | 0.05 | 0.05 | 2.37 | 1.11 | MapAlign | | -PKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 5uk5A | 0.20 | 0.07 | 2.30 | 1.39 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ECQPNACQNGGTCHNSHGGYNCVCVNGWTGEDDDCASAACFQGATCHDRVASFYCECPHGR--TGLL--C-HLNDACISNCNEGSNCDTN------------PVNGKAICT----CPSGYT-------------------GPACSQDVDECALNPCEH-AGKCLGSFECQCLQGYTGP-----RCEIDVNECISNPCQNDATCLDQ--IGEFQCICMPGYEG---------------VYCESGR--------------------------------------------------------------------------------------------- |
5 | 6pogB | 0.11 | 0.05 | 1.83 | 0.56 | CEthreader | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------DFCSERHNCMENSICRNLNDRAVCSCRDGFRALREDNAYCEDIDECAEGRHYCRENTMCVNTPG---------------------------SFMCICKTGYIRIDDYSCTEHD----------------------------------ECITNQHNCDENALCFNTVGGHNCVCKPGYTGNGTTC-------KAFCKDGCRNGGACIAA-----NVCACPQGFTGP---SCETDIDECSDGFVQCDSRANCINLPGWYHCECRDGYHDNGMFSPSGESCEDIDECGTSCANDTICFNLDGGYDCRCCTGHHHH--------------------------- |
6 | 4xbmB | 0.08 | 0.05 | 2.02 | 0.78 | EigenThreader | | FV--------------NKKGLLGNRNCCRGGAGPPPCACLKHYQASVSPEPPCTYGVDSFSLPDGGNFTWPGALHTDSP-DPERLTVGEEWSQDLHSSGRT----------DLKYSYRFVCDEHYEGCSVFCRPRDDA---------------------FGHFTCGERGEPGWPYCTCLPGCDEQHGFC--DKPGECKCRVGWQG-RYCDECIRYP----------------------------------------GCLHGTC-------------QQPWQC------NCQEG----------------WGGLFCNQDL---NYCTHHKPCKNGATCTQGSYTCSCRPGYTGA-----TCELGIDECDPSPCKNGGSCTDLE--NSYSCTCPPGFYG--KICELSAMTCADGPCFNGG--------------------------------------RCSDSPDGGYSCRCPVGYSGFNCEKKIDYCSSSPCSNGAGDAYLCCHCDD------ |
7 | 5uk5A | 0.16 | 0.05 | 1.75 | 0.82 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ECQPNACQNGGTCHNSHGGYNCVCVNGWT--GEDCSE------------------------------------------------------NIDDCASAACFQGATCHDRVASFYCECPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNALGANPCEHAGKCLGSFECQCLQGYTGPRCEIDVNECISNPCQ-----NDATCL--DQIGEFQCICMP---------------GYEGVYCESG---------------------------------------------------------------------------------------------- |
8 | 3gavA | 0.11 | 0.10 | 3.52 | 1.22 | SPARKS-K | | CIRVKTCSKSSIDIENGFISESQYTYALKEKAKYQYVTADGETSGSITWSAQPTIPVFMNARTKNDFTWFKLNDTLDYESNTGSTTGSGYNGWSDLPIELPKIDVHLVPDRKKDQYKVGEVTIVGPNYHFGLSPDLPICKEQVQSCGPPPELLNGNVKEKTKEWTTLPVCIVEESTCGDIPELEHGWAQLSSPPYEFNCSESFTMIGHRCIHGVWSSNLIIEEHLKNKKEFDHNSN---------IRY---RCRGKEGWIHTVCINPPPPQIPNSHNMTTTGEKVSVLCQYLIQEGEEI------------TCKDGR--WQSIPLCVEKPCSQEHGTINSSLSYTCEGGFRISEENETTCYSSPPQCEGLPCKSHGVVAHMSDSYQYTYKCFEGFGIDGPAICLG--EKWSHPSCIKTD------------------------------CLSLPSFENAIPMGEKKDVYKATYYKMDGINSTGRPTCRDTSVNPPTVQNAYIVSRQMSKYPS |
9 | 1z27A | 0.21 | 0.06 | 1.99 | 1.03 | CNFpred | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDTICK-NGQLVQMSNHFKCMCNEGLVHLSNTCEEKNECLGKACGEF------------------------------------GQCIENPD---------AQVNMYKCGCIEGYTLKE-----------------------DTCVLDVCQYKNCGE-SGECIVSAGCSCAIGKVPNPEDEKKCTKTGTACQLKCNTDNEVCKNVE--GVYKCQCMEGFTFDKKNVCLG----------------------------------------------------------------------------------------------------------- |
10 | 6rw8A | 0.06 | 0.03 | 1.46 | 0.67 | DEthreader | | ---------------------------TNLNITPSTLNNS--------------S-------HR-V---------------------------------ALTQNNMDEE-IST-LSL--------------------SNELLLHNI-----------------------YHLYERQ----DPTSLLAIKTDIKATGISDIWQVISLTIVLLCHSDIS-------------------------------Q--YSTK--PSHFTMLFNTPL-----------LNGQEFS--------------ADN-TK---------NHFYLIMFLYTLWKLANGGTNPEFMCNLVNSMLLSPYVNTKIALLLIFLFQCTQWLTTQKWVVFTTDQHDLPTLQALTRFHA--VIMRCGSYATAFLQSKFNAALYNWLRGRLSAIYYQFYDLAVSLCLMAEQTYQYELNNA---------KSYLEKDER----ALEVT-----IATDYDGNTRRITMMFELVYTI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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