>Q9H008 (91 residues) RPYLLIHDGVRSEFDQIDTSNPNCVVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKG RYYKETSGLMLDVGPYMKALEYACGIKAEVV |
Sequence |
20 40 60 80 | | | | RPYLLIHDGVRSEFDQIDTSNPNCVVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLMLDVGPYMKALEYACGIKAEVV |
Prediction | CCSSSCCHHHHHHHCCCCCCCCCSSSSCCCCCCCCHHHHHHHHHHHHHCCCCSSSSSCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCSSC |
Confidence | 9589648558887037998899989984788878999999999999838998199964897433789986680399999999979983769 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 | | | | RPYLLIHDGVRSEFDQIDTSNPNCVVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLMLDVGPYMKALEYACGIKAEVV |
Prediction | 3121023750364067146740300000214751326303400410374761300002433314576224123212030023017351536 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 | | | | | |||||||||||||
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SS Seq | CCSSSCCHHHHHHHCCCCCCCCCSSSSCCCCCCCCHHHHHHHHHHHHHCCCCSSSSSCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCSSC RPYLLIHDGVRSEFDQIDTSNPNCVVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLMLDVGPYMKALEYACGIKAEVV | |||||||||||||||||||
1 | 2oycA2 | 0.21 | 0.21 | 6.62 | 1.33 | DEthreader | GVFVLGGEGLRAELRAAGLRRVRAVLVGYD-EHFSFAKLREACAHLR-DPECLLVATDRDPWHPLDGSRTPGTGSLAAAVETASGRQALVV | |||||||||||||
2 | 1yv9A2 | 0.17 | 0.16 | 5.42 | 1.94 | SPARKS-K | KVFVIGEAGLIDLILEAGETNPDYVVVGL-DTELSYEKVVLATLAIQK--GALFIGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYI | |||||||||||||
3 | 2oycA2 | 0.20 | 0.20 | 6.32 | 1.03 | MapAlign | AVFVLGGEGLRAELRAAGLRLARAVLVGYDE-HFSFAKLREACAHL-RDPECLLVATDRDPWHPLDGSRTPGTGSLAAAVETASGRQALVV | |||||||||||||
4 | 2oycA2 | 0.21 | 0.21 | 6.62 | 0.84 | CEthreader | AVFVLGGEGLRAELRAAGLPRVRAVLVGYDE-HFSFAKLREACAHLRD-PECLLVATDRDPWHPLSDGRTPGTGSLAAAVETASGRQALVV | |||||||||||||
5 | 2x4dA1 | 0.98 | 0.98 | 27.41 | 2.07 | MUSTER | RPYLLIHDGVRSEFDQIDTSNPNCVVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYAATSGLMLDVGPYMKALEYACGIKAEVV | |||||||||||||
6 | 1yv9A2 | 0.17 | 0.16 | 5.42 | 2.22 | HHsearch | KVFVIGEAGLIDLILEAGETNPDYVVVGL-DTELSYEKVVLATLAIQK--GALFIGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYI | |||||||||||||
7 | 2x4dA1 | 0.98 | 0.98 | 27.41 | 1.62 | FFAS-3D | RPYLLIHDGVRSEFDQIDTSNPNCVVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYAATSGLMLDVGPYMKALEYACGIKAEVV | |||||||||||||
8 | 2x4dA1 | 0.98 | 0.98 | 27.41 | 0.78 | EigenThreader | RPYLLIHDGVRSEFDQIDTSNPNCVVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYAATSGLMLDVGPYMKALEYACGIKAEVV | |||||||||||||
9 | 2x4dA | 0.98 | 0.98 | 27.41 | 1.06 | CNFpred | RPYLLIHDGVRSEFDQIDTSNPNCVVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYAATSGLMLDVGPYMKALEYACGIKAEVV | |||||||||||||
10 | 2oycA | 0.21 | 0.21 | 6.62 | 1.33 | DEthreader | GVFVLGGEGLRAELRAAGLRRVRAVLVGYD-EHFSFAKLREACAHLR-DPECLLVATDRDPWHPLDGSRTPGTGSLAAAVETASGRQALVV | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |