>Q8TEF2 (133 residues) MSTEGPSLASSPAISPLAFLSAPVTPGTLAEATDPLPMLIALACIFLLLATCLLFMTLCK PAALDPSRRRAHECMPHHPGSPSEPQLRLWKRLGSLRLSLHSFRHGRPTVPRQPLPGPED NRSHCDYMESTKM |
Sequence |
20 40 60 80 100 120 | | | | | | MSTEGPSLASSPAISPLAFLSAPVTPGTLAEATDPLPMLIALACIFLLLATCLLFMTLCKPAALDPSRRRAHECMPHHPGSPSEPQLRLWKRLGSLRLSLHSFRHGRPTVPRQPLPGPEDNRSHCDYMESTKM |
Prediction | CCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCC |
Confidence | 9988888778987783233237888972221268625899999999999999999985262236823355310288999998843899999998999999986217998666889999878887631220369 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | MSTEGPSLASSPAISPLAFLSAPVTPGTLAEATDPLPMLIALACIFLLLATCLLFMTLCKPAALDPSRRRAHECMPHHPGSPSEPQLRLWKRLGSLRLSLHSFRHGRPTVPRQPLPGPEDNRSHCDYMESTKM |
Prediction | 8647456144543343342132334444345334212000133123113231321111133231455453345134434653753313015413513431441454443255441544764543142355368 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCC MSTEGPSLASSPAISPLAFLSAPVTPGTLAEATDPLPMLIALACIFLLLATCLLFMTLCKPAALDPSRRRAHECMPHHPGSPSEPQLRLWKRLGSLRLSLHSFRHGRPTVPRQPLPGPEDNRSHCDYMESTKM | |||||||||||||||||||
1 | 1vt4I | 0.05 | 0.05 | 2.22 | 0.51 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
2 | 2otoB | 0.08 | 0.08 | 3.03 | 0.48 | EigenThreader | NNPAIQNIRLRHENKDLKARLENAEVAGRDFKRAEELEKAKQALEDQRKDLETKLKELQQDYDLAKESTSWDRQRLEKELEEKKEALELAIDQASRDYHRATALEKELEEKKKALELAIDQASQDYNRANVLE | |||||||||||||
3 | 2k21A | 0.10 | 0.09 | 3.35 | 0.43 | FFAS-3D | MILSNTTAVTPFLTKLWQETVQQGGNMSGLARRSPRSLYVLMVLGFFGFFTLGIMLSYIRSKKLEHSNDPFNVYIESDAWQEKDKAYVQARVLESYKSCYVVENHLAIEQPNTHLPETKPS------------ | |||||||||||||
4 | 5yfpE5 | 0.14 | 0.12 | 4.11 | 0.97 | SPARKS-K | KSQELLDQDTLPAIEIVNILNEQSSKFLKGKNLQTFLTLIGEELYGLLLIGGVVVTKDIIEDWGVASLIDKFATFTVQPELLES-LTKHLADIG--RDIIQSYNREDFNHDNFINSVK--------------- | |||||||||||||
5 | 6humF | 0.16 | 0.05 | 1.74 | 0.54 | CNFpred | ---------------------------------DPLAALMLVIVTTVAFLVMLYSDGYMAHD---------------------PGYVRFFAYLSLFG------------------------------------ | |||||||||||||
6 | 7abis | 0.05 | 0.05 | 2.11 | 0.83 | DEthreader | ---F---VPALKPKPFGSEQRIKLALLL-I-IP-WDITRKGLRHGFNIRMCQGSKKDFFKKFLE----E-MTQNPYLGISHRHLSDHLSELVEQTLSDLEQSCLESDVLSWALAELMMWSKDSYLESVFDIME | |||||||||||||
7 | 1m56B | 0.06 | 0.06 | 2.62 | 0.68 | MapAlign | IFVTLLILYAVWRFHEKRNKVPARFTHNSPLEIAWTIVPIVILVAIGAFSLPVLFNQQWGYEYPDEEISFESYMIGSPATGGDNRVEQQLIEAGYSRPVNKTVVVQVTGADVIHSWTVPAFGVKQDAVPGRLA | |||||||||||||
8 | 2dkiA1 | 0.14 | 0.13 | 4.38 | 0.59 | MUSTER | MQFH---LNGFRPGNPLIAPASPLAPAHTEAVPSQVDVLIV--PAGLTLAAQLAAFPDIRTCIVE----QKEGPMELGQANQARVHDHYLERMRNSPSRLEPHYAVDHGAADYPLERCDAAHAGQIETVQARY | |||||||||||||
9 | 2pffB | 0.17 | 0.17 | 5.67 | 0.69 | HHsearch | RTTLDAEKVFTQGLNILEWLENPSNPGSYLKHSQGLVTAVAIAFVSVRKAITVLFFIGVRCYEAPPSILENNEGVPSSNLTQEQVQVNKTNSHLTLRKAKAPFLPVASPFHSHLLVPASDDLVKNNVSFNAKD | |||||||||||||
10 | 1eysH | 0.07 | 0.07 | 2.83 | 0.44 | CEthreader | PFSPAPGSPLVPNGDPMLSGFGPAASPDRPKHCDLTFEGLPKIVPMRVAKEFSIAPDPRGMTVVGLDGEVAGTVLEVEVAANKKKVLLPIGFSRFDKKARKVKVDAIKAAHFANVPTCAYYAGGKLYATAERA | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |