Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| SS Seq | CCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHCSSSSSSCCCCCCHHHHHHCCCCCCCCCCC MRSARSTALNRGEQRAVRYYSHMKLNMAEEEDYMSDSFINVQEDIRPGLPMLRQIREARRKEEKQQEANLKNRQKSLKEEEQERRDIGLKNALGCENKGFALLQKMGYKSGQALGKSGGGIVEPIPLNIKTGKSGIGHEASLKRKAEEKLESYRKKIHMKNQAEEKAAEQFRMRLKNKQDEMKLEGDLRRSQRACQQLDVQKNIQVPREAWYWLRLEEETEEDEEEKEQDEDEYKSEDLSVLEKLQILTSYLREEHLYCIWCGTAYEDKEDLSSNCPGPTSADHD |
1 | 1vt4I | 0.06 | 0.06 | 2.61 | 1.13 | MapAlign | | IMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRVALDVCLSKNCNSPETVLEMLQKLLYQIDPNWTELRRLLKSKPYENCLLVLNLSCKILLTTVEKQPKESTISIPSILHRSIVDHYNIPKTYFYSHIGHHLKNIEHPERMTLFYERLVNAILDFTDLLRIAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
2 | 6sh7B | 0.43 | 0.07 | 2.06 | 2.52 | HHsearch | | ----------------------------------------------------------------------------------------------EDNIGNQLLRKMGWTGG-GLGKSGEGIREPISVKEQHKREGLGLDVE------------------------------------------------------------------------------------------------------------------------------------------------ |
3 | 3ax1A | 0.13 | 0.09 | 3.16 | 0.72 | CEthreader | | --------------------------------------------------------------------GLMSYKQFIQELEDDILPSEAERRYQEYKSEYITTQKRAFFNTHKEEDWLKNKYHPTNLLSVIERR-----NDLAQKVAKDFLLDLQSGTLDLGPAVTALNAAPKAPSFTSDPKRILTDVEQTQALVRKLDSEKKIEENVLQSTGPVVIIRGLTSVKG------------LEGVELLDTLVTYLWRVHGLDYYGKVETNEAKGLRHVRDENESKFDS |
4 | 2ax3A | 0.09 | 0.08 | 2.95 | 0.65 | EigenThreader | | -HHKEIDELTIKEYGVDSRILERAGISVVLAEEELGVVARNLLGVVKGKKKTPDCEYNYGLYKKFSILNEFDGEITGEYAEIINLVNKSGHILFPGRDLTGGTYGAGSRLYSGAPVLSGGQNLIATSRFIDTEKGFFSLQNLQECLELSKDHVREFVNEFLKTL-------------------------EDADAINVLSVLKERKSP--AVPHPGEARLVKKTVGDVKYNYELAEEFA-----KENDGDVLTG---IAGFI--AQGLSPLEASTVSVYLHGFAAE |
5 | 7jtss | 0.15 | 0.12 | 3.91 | 0.70 | FFAS-3D | | -KLSRETQTVKIKQHSQQTVREQATQMARPGVLLDN---DYDKEVTPGRYQERDEAYLRGKKMEREAFLRDQEARAQSEAEEHRRREIQRRMHPRTAADFEVLYNE----------------------------LEAWRLQETRKIKEAEQQVLQQLLHKETKLLQTIDRLKINANQENKEARIQHTLNETTRAKELQQLYNGLNLPLL---------TVDERLDVLLHVKWTVKEFDCDLTRELVDLIDR-----------------EADLLNR--GRNPKM-- |
6 | 6yvuB | 0.08 | 0.07 | 2.93 | 0.94 | SPARKS-K | | ELTLAEQQVKEAEMAYVKAVSDKA---------------QLNVVMKNRGEYNDLQSETKTKKEKIKGLQDEIMKIIKLQMQNSKVESVCQKLILVAKLKKVKSASKKSGGDVVKFQKLLQNSERDVELSSDELKVIEEHTKLALAENDTNMNETLNLKVELKEQSEQLKEQMEDMEESINEFKSIEIEMKNKLEKLNSLLTYIKSEITQ--QEKGLESEIKDAETSCLSEDELRELDVELIESKINELSYYVEETNVDIGVLEEYARRLAEFKRRKLDLNNAVQK |
7 | 6f7jB | 0.16 | 0.07 | 2.46 | 0.51 | CNFpred | | ---------------------------------------------------------------------------------------------------KEICWNLQNIRL----------ECELSPGVNR---------DLTRRVRNINGI--------------------------QHKQIVRNDIKLAAKLIHTLDDRTQLW------QNPILKNITDYLIEEVSAEEEELLG-DEKLIKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPM |
8 | 7lkpA | 0.06 | 0.04 | 1.86 | 0.67 | DEthreader | | -----------------FPNKANVNPTPNYNNSIARPSMQDLWVP-TAEILFLRQDRDIFNITDRTLRLVNQYLECLVLDKF--DM-EQG-TR---SQVQAEA----SEQFTVLADTSIGNIKAHNI--------TVI-SQPLNLT-QLSEITVLTTSVDAVVAICVIFSMSFVPASFVLYLIQERNSKHLQIS-GYCP-------TGREHLYLYARLRGV-PAEEIEKVA--------------LAGTYSGGNKRKLS---DEPTTGMD--------------- |
9 | 7kchA2 | 0.07 | 0.07 | 2.89 | 1.08 | MapAlign | | FGKFVEIQFNNGKISGAAVRTYLLERSRVTQISSPERNYHCFYQLVAGASPEDAERLDDCKEYQLTREAMDIVGITTEEQEAIFRTIAAVLFDSSDASEVSTEKSKFHLKAAAEMLMCDELELTTRIMKATRTESITKILKSQATDNRDSIAKTIYAKLFDWLVNKVNKSIEQFCINLTNEKLQQHFNTHVFKMEQAEYRKEEINWDFVD-NIDVLDLIEKKPLGIIALLDEACMLPRSTAESFARKLGDTFNNHRRFSKRTAFTIDHYAGQVEYRASRCAFVSG |
10 | 5cwpA | 0.14 | 0.12 | 3.93 | 0.71 | MUSTER | | ----MSSDEEEARELIERAKEAAERAQEAAER-------TGDPRVR------ELARELKRLAQEAAEEVKRDPSSSDVNEALKLIVEAIEAAV----RALEAAERTGDPEVREL------ARELVRLAVE-------AAEEVQRNPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNPSSEEVNEAL--------KKIVKAIQEAVESLREAEESGDPEKREKARERVREAV----------ERAEEVQRDPSGWLE---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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