Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MGPGERAGGGGDAGKGNAAGGGGGGRSATTAGSRAVSALCLLLSVGSAAACLLLGVQAAALQGRVAALEEERELLRRAGPPGALDAWAEPHLERLLREKLDGLAKIRTAREAPSECVCPPGPPGRRGKPGRRGDPGPPGQSGRDGYPGPLGLDGKPGLPGPKGEKGAPGDFGPRGDQGQDGAAGPPGPPGPPGARGPPGDTGKDGPRGAQGPAGPKGEPGQDGEMGPKGPPGPKGEPGVPGKKGDDGTPSQPGPPGPKGEPGSMGPRGENGVDGAPGPKGEPGHRGTDGAAGPRGAPGLKGEQGDTVVIDYDGRILDALKGPPGPQGPPGPPGIPGAKGELGLPGAPGIDGEKGPKGQKGDPGEPGPAGLKGEAGEMGLSGLPGADGLKGEKGESASDSLQESLAQLIVEPGPPGPPGPPGPMGLQGIQGPKGLDGAKGEKGASGERGPSGLPGPVGPPGLIGLPGTKGEKGRPGEPGLDGFPGPRGEKGDRSERGEKGERGVPGRKGVKGQKGEPGPPGLDQPCPVGPDGLPVPGCWHK |
1 | 4mhcA | 0.07 | 0.07 | 2.85 | 0.69 | CEthreader | | EVGGLGAFTPFQRQQVTNIPDEVLSQVSNTEIKSDMGIFLELNYCWITSDNKLILWNINNSSEYHCIDEIEHTILKVKLVKPSPNTFVSSVENLLIVATLFDIYILTISFNDRTHELNIFNTGLKVNVTGFNVSNIISYERTGQIFFTGATDGVNVWELQYNKICLTKSNLEETISQLEVDQSRGVLHTLSTKSIVRSYLITSNGLVGPVLIDAAHIRRGMNALGVKNSPLLSNRAFKIAKIVSISMCENNDLFLAVITTTGVRLFKGSISRRSIGSLKLDSVKFPPTSGPLSTQKASSTYINTTCASTIISPGIYFTCVRKRAEHKLYVSAPDYGILKNYGKYVENTALLDTTDEIKEIVPLTRSFNYTSTPQGYANVFASQYSAEPLKVATSNALEIYCYRTPDEVFESLIENPLPFIHSYGLSEACSTALYLACKFNKSEHIKSSALAFFSAGIPGVVEIKPKSVLSPRFYGSALLITRLFSQIWEERVFVGISITRPQVEYYLSSISVLADFFNIHRPSFVSTASDAESIAMNALI |
2 | 5vkqA | 0.07 | 0.07 | 2.84 | 1.20 | EigenThreader | | ----MNTGMTPLMYATKDNKTAIMDRMIELGADVGARNMYSRELTKRGVDVSSRQTGTATNILRALLAALLLAVESGNQSMCRELLAAQTAEQLLHLAARRMVRILVDYGTNVDTQNGEGQTPLHIAAAEGDRASASIADNQDRTPMHLAAENGHAHVIEILADKFKASIFERTKDGSTLKGVYLHMPNKDGAREKVDVTTNDNYTAADVHVRGGKLRETPLHIAARVKDGGASPNLTTDDCLTEGDPLYKSNTGETSVNEDGATALHYTCQITKEEVKIPEGADVTLQTKTALETNNDVLMEMISHM--NPTDIQKAMNRQSSVGWTHARVDVFDTEGRSALHLAAERGYLHVCDALLTNKAFINSKSRVGRTAVIDILTLRKQTPLHLAAASGQMEVCQLLLELGANIDATDDLGQKPIHVAAQNNYSEVAKLFLQQHPSLVNATSKDGNTCAHIAAMQGSARNKLTDATPLQLAAEGGHASCTEENKAGFTAVHLAAQNGHLRINSKKLGLTATVKSETPTGQSLFGDLGTESGMTP |
3 | 3hr2B | 0.29 | 0.23 | 6.94 | 1.80 | FFAS-3D | | ------------------------------------------------------------------------------------------------------------GEEGKRGSPGEPGSAGPAGPGLRGSGSRGLGADGRAGVMGPPGNRGSTGPAGVRGPNGDAGRGEGLMGPRGLGSGNVGPAGKEGPVGLGIDGRGPIGPAGPRGEAGNIGFGPKGPSGDGKGEKGHPGLAGARGGPGPQGVQGGKGEQGPAGPGFQGLGPSGTAGEVGKGERGLPGEFGLGPAGPRGERPGESGAAGPSGPIGIRGPSGAGPDGNKGEAGAVGAPRGAAGIGGKGEKGETGLRGEIGNPGRDGPAGASGDRGEAGAAGPSGPAGPRGSPGERGEVGPAGPNGFAGPAGSAGQGAGEKGTKGPKGENGIVGPTGPVGAAGPSGPNGPPGPAGSRGDGGPPGMTGAAGRTGPGPSGITGPGPGAAGKEGIRGPRGDQGPVGRTGEIGASGPPGFAGEKGPSGEGTTGPAGPQGLLGAGILGL--- |
4 | 1vt4I3 | 0.26 | 0.24 | 7.37 | 1.63 | SPARKS-K | | IVDHYNIPKTFDSDDLIPPYLD------QYFYSHIGHHLKNIPERMTLFRMVFLDFRFLEQKIRTLQQLKFYKPYICDNDP--KYERLVNAILDFLPKITDLLRIALMAEDEAGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----------GGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
5 | 3hqvA | 0.41 | 0.31 | 9.15 | 1.94 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------PTGARGAMGDRGEAGPMGPAGFAGPMGADGQMGAKGEMGDTGVKGDAGPMGPAGPAGPMGPIGNVGAMGPMGSRGAAGPMGATGFMGAAGRVGPMGPSGNAGPMGPMGPVGKEGGKGPRGETGPAGRMGEVGPMGPMGPAGEKGSMGADGPAGSMGTPGPQGIAGQRGVVGLMGQRGKRGFMGLMGPSGEMGKQGP--SGASGERGPMGPMGPMGLAGPMGESGREGSMGAEGSMGRDGAMGAKGDRGETGPAGPMGAMGAMGAPGPVGPAGKNGD-------------RGETGPAGPAGPIGPAGARGPAGPQGPRGDMGETGEQGDRGIMGHRGFSGLQGPMGSMGSMGEQGPSGASGPAGPRGPMGSAGSMGKDGLNGLMGPIGMMGPRGRTGDSGPAGPMGMGPMGPMGPPSGGYDFS |
6 | 6g2dC | 0.06 | 0.03 | 1.20 | 0.50 | DEthreader | | -------------------------------------------------------K--A--TGT-VQELNFWGYHCFSWGEEANMVALKELSIRGDFRTTYMKEERYRVFEKENDPSVMRVEDGGH----------------GCIHYVKRPGAVLAKMQSVQQAELHTSLPRISTARKDERMKQGRDPTLSHLETIGLLAEFLTNEYEMFRLLMTDIIVLFLRA------------------------------------------------------------------IQIHNN---------PTK--------TPYDPRWMLAGR-PHPTQKGQWLSGFDYG-------------------------------G----YQAIKDF-DYDQVLKFGAYIVDGLRESSINPRHNPELISRDYVLKQIRS----------HISQREVIRIL----------------------------------------------------------------------------------------- |
7 | 7ky5A | 0.06 | 0.06 | 2.55 | 1.55 | MapAlign | | YFLILLILGAFQIFGVTNPGFASVPLIVIVIITAIKDGIEDSRRTVLDLEVNSRELNFSVILNFVLLFILCFTAGIVNGNGFVSFWVAVLYISVEIIKTAQAIFIYTWNISDDLGQIEYIFSDKTGTLTQNVMEFKKCTINGVSYGRAYTEALAGLRVDVESEGRREKEEIAKDRETMIDELRSMSDNTQFCPEDLTFVSKEIVEDLKGSSGDHQQKCCEHFLLALALCHSVLVEPNKDDPKKLDIKAQSPDESALVSTARQLGYSFVGSSKSGLIVEIQGVQKEFQVLMSCIIKIPGEPKALLICKGADGLRTLCLAQRELTWSEYERWVKTYDVAAASVTNREEELDKVTDVIERELILLGGTAIEDRLQDGVPDSIALLAEAGIKLWVLTGDKVETAINIGFSCNVLNNDMELLVVKASGEDQVVNNLVTKYLREKFGMSGSEEELKEAKREHGLPQGNFAVIIDGDALKVALNGEEMRRKFLLLCKNCKAVLCCRVSPAQKAAVVKLVKKTLDVMTLAIGDGSNDVAMIQSADVGV |
8 | 3hr2B | 0.36 | 0.34 | 10.21 | 1.84 | MUSTER | | RGLGADGRAGVMGPPGNRGSTGPAGVRGPNGDAG-----------GLMGPRG--GNVGPAGKEGPVG-RGPIGPAGPRGEAGNIG--GEKGHPGLAGARGPDGNNGAQGPQGVQGGKGEQGPAGPSGTAGEVGPAGPRGERGESGAAGPSGPIGIRGPSGPDGNKGEAGAVGAPGSAGASGPGGLKGEKGETGLRGEIGNPGRDGARGAAGPAGASGDRGEAGAAGPSGPAGPRGSPGERGEVGPAGPNGFAGPAGSAGEKGTKGPKGENGIVGPTGPVGAAGPSGPNGPPGPAGSRGDGGPPGMTGAAGRTGPGPSGITGPPGAAGKEGIRGPRGDQGPVGRTGEIGASGPPGFAGEKGPSGTAGPQGLLGIAGALGEAGEAGRDGNIGPTGAAGAPGPHGSVGP-AGKHGNRGEPGPAGSVGPVGAVGPRGPSGPQGIRGDKGEPGARGLPGLKGHNGLQGLPGLAGLHGDQGAPGPVGPAGPRGPAGPSGPIGKDGRSGHPGPVGPAGVRGSQGSQGPAGGPGPGPPGVSGGG---- |
9 | 3hr2B | 0.36 | 0.34 | 10.14 | 4.27 | HHsearch | | AGSGSRGL-GADGRAGVMNRGSTGPAGVRPNGD--------------------AGRG-EGLMGPRGLG--SGN-VGPAGKEGPVGLGIDIGPAGPRGEANIGF-GPKGPSGDGKGEKGHPGLAGARGPDGNNGAQGPQGVQGGKGEQGPAGLPGEFGLAGPRGESGAAGPSGPIGIRGPSGADGNKGEAGAPGSAGASGPGGGKGEKGETGLRGEIGNPGRDGARGPAGASGDRGEAGAAGPSGPAGPRGSPGERGEVGPAGPNGFAGPAGEKGTKGPKGENGIVGAAGPSGPNGPPGPAGSRGDGGPPGMTGFTGPGPSGITGGPGAAGKEGIRGPRGDQGPVGRTGESGPPGFAGEKGPSGEGGTAGPQGLLGILGL-GSRGERGIAGALGEAGRDGNDGGRDGQ-GHKGERGNIGPTGAAGAPGPHGSVGPAGKHGEPGPAGSVGPVGAVGPRGPSGPQGIRGDKGLPGLKGAPGPVGPAGPRGPAGPSGPIGKDGRSGHPGPVGPAGVRGSQGSQGPAGGPGPGPPGVSGGG---- |
10 | 3ihyC | 0.07 | 0.05 | 2.17 | 0.69 | CEthreader | | LVQALKYENFDDIKNGLEPQDLCTFLISRACKNSTLANYLYWYVIVECEDQDTQQRDPKTHEMYLNVMRRFSQALLKGDKSVRVMRSLLAAQQTFVDRLVHLMKAVQRESGNRKKKNERLQALLGDNEKMNLSDVELIPLPLEPQVKIRGIIPETATLFKSALMPAQLFFKTEDGGK-----------YPVIFKHGDDLRQDQLILQIISLMDKLLRKENLDLKLTPYKVLATSTKHGFMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGVGDRHLDNLLLTKTGKLFHIDFGYILGRDPKPLP--PPMKLNKEMVEGMGGTQSEQYQEFRKQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDEEAVHYMQSLIDESVHALF------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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