Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
| | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCSSSSSCCCCCCSSSSCCCCCCCHHHHHHHHHHCCCCCHHHSSSSSCCSSCCCCCCCCCCCSSSSSSSCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHCCHHHHCCCCCCCCC MAEAAALVWIRGPGFGCKAVRCASGRCTVRDFIHRHCQDQNVPVENFFVKCNGALINTSDTVQHGAVYSLEPRLCGGKGGFGSMLRALGAQIEKTTNREACRDLSGRRLRDVNHEKAMAEWVKQQAEREAEKEQKRLERLQRKLVEPKHCFTSPDYQQQCHEMAERLEDSVLKGMQAASSKMVSAEISENRKRQWPTKSQTDRGASAGKRRCFWLGMEGLETAEGSNSESSDDDSEEAPSTSGMGFHAPKIGSNGVEMAAKFPSGSQRARVVNTDHGSPEQLQIPVTDSGRHILEDSCAELGESKEHMESRMVTETEETQEKKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPEERENVAVAKLQESQPGNAVIDKETIDLLAFTSVAELELLGLEKLKCELMALGLKCGGTLQERAARLFSVRGLAKEQIDPALFAKPLKGKKK |
1 | 6yvuB | 0.10 | 0.10 | 3.58 | 1.02 | EigenThreader | | SVLRDTLVAQNLKQANNVRVVTVDGKLI----------DISGTMS-------GG--GNHVAKGLMKL------KVDDYTPEEVDKIERELSERENNFRVASDTVHEMEEELKKLRDHEPDLESQISKAEMEADSLASELTLAEQQVKEAEMAYVKAVSDDLQSETKTKKEKIKGLQDEIMKIISVCQKLDILVAKLKKVKSASKKSGGDVVKFQKLLQNSERDVELSSDELKVIEEQLKHTKLALAENDTNMNETLNLKVELKEQSEQLKEQMEDMEESINEFKSIEIEMKNKLEKLNSLLTYIKSEITQQEKGLESEIKDAETSCLSEDELRELDVELIESKINELSYYVEETNVDIGVLEEYARRLAEFKRRKLDLNNAVQKRDFDEFMAGFNIISMTLKEMYQMITMGEKTLSSLALVFALHKYKDAALDFRNVSIVANYIKERTKNA |
2 | 5jcss | 0.10 | 0.10 | 3.60 | 1.10 | SPARKS-K | | TFEWRAGVLATAVKEGRWVLIIDKAPTDVLSILLSLLEKETVKAANGFQLISTVRINEDHQKDSSNKIY-NLNMIGMRI-W------NVIELEEPSEEDLTHILAQKKLIDS-----YKNVKSIYMNRDLIKLCERLDIL--FKNNGINKPDQLIQSSVYDSIFSEAADLEPIIQAIGESLDIASSRISLFLTQHVPTLENLDDSIKAVLLKEKLNIQKKSMNSTLFAFTNHSLRSVCIQMTEPVLLVGETGTGKTTVVQQLAKMLAKKLTVINVSQQTETGDLPKTVAVPIQENFETLFNATFSLKKNEKFHKMLHRCAYKMAQSILKITNTENENENAKKKKRRLNTHEKKLLLDKWADFNDSVKKFEAQSSSIENSFVFNFVELDEVNLADTLESISDLLTEPDSRSILLSEKGDAEPIKAHPDFRIFACMNPATDVGKRDLPMGIRS |
3 | 2kdiA | 0.13 | 0.03 | 1.00 | 1.26 | HHsearch | | HHHGEFQIFAKTLTGKTITLEVESS-DTIDNVKSKIQDKEGIPPDQQRLIWAGKQLEDGRTLSRESTLHLVLRLRGGSMGGAAIRKAIELSLKESRNSGGY-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 1qzeA | 0.06 | 0.03 | 1.18 | 0.46 | CEthreader | | ---SAVTITLKTLQQQTFKIRME-PDETVKVLKEKIEAEKGFPVAGQKLIYAGKILSDDVPIREKNFVVVMVTGSEYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLLTLEFLRDQPQFQNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQMTPQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQNF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
5 | 1oqyA | 0.08 | 0.06 | 2.28 | 0.88 | EigenThreader | | -SAVTITLKTL---QQQTFKIRMEPDETVKVLKEKIEAEKGRDAF-PQKLIYKILSDDVPIRDYRFVVVMVTKTKAGQGT-----------------------------------------------------------------SAPPEASPT--------------------------AAPESSTSFPPAPTSGMSHPPPAAREDK----SPSEESAPTTSPESVSGSVPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGYERAALRASYNNPHRAVEYLLTGIPGSPEPEHGSVQESQVSEQPATEAAGENPQFQNMRQVIQQNPALLPALLQQLGQIQMLNEPPGELADISDV--EGEVG--AIGEEAPQMNYIQVTPQE--------------KEAIERLKALG----FPESLVIQAYFACEKNENLAANFLLSQNFDDE---- |
6 | 2kdiA | 0.13 | 0.03 | 1.00 | 0.71 | FFAS-3D | | -HHGEFQIFAKTLTGKTITLEV-ESSDTIDNVKSKIQDKEGIPPDQQRLIWAGKQLEDGRTIQRESTLHLVLRLRGGSMGGAELIRKAIELSLKESRNSG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 5yfpB | 0.09 | 0.09 | 3.41 | 1.08 | SPARKS-K | | TKYVKIKNKLDQIYKEFDEKTNEKNQCDSPKENQINVESLNKKVDEVIRTTTFKLKPLMDNYQKILNYQATKKFIELNKFYFNLPKSLKRCLTNNDFNEFIIEYSGLTLRRRQIENLLVTYKDLIWNSLIETILSLFSKLLNLENFIKSSNENP-----ILRWMSIKMNGFQNELNELSGHMISKIIHSQRLILQNNTNQDKSQGCVELSYYLKINQTGKDSEGLKSTKVNTISGTSYLNLNCQPSSQGLTDSPTDQFIEFWEHIEKFLDGTYQNSIINEKRKENILIGDSNIIESYQKSLILKEEQINEVRLKGEEFITSVSQNLISSQSSLPSSLKDSTGDITRSNKDSGSPLDYGFIPPKIVEPILKFSTELAQLNITTNG-------------ITICRNTLSTIINRCVGAISSTKLRDISNFYQLENWQVYETVTFSSKSQDSSKN |
8 | 4hwiB | 0.09 | 0.03 | 1.26 | 0.67 | CNFpred | | -----IRVRIKYG-AVYHEINISP-QASFGELKKMLTGPTGIHHQDQKLMYKDKERDSKAFLDVSVKDKSKMVLIEDPLSQEKRFLEMRKIAKTEKASKAISDI----------SLEVDRLGGRVSAFEMVIAEKDLVTVIELLMNE-AIVAEGDVKLQRKMQVKRVQNYVLDALKVKNS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 6z2wE | 0.05 | 0.04 | 1.61 | 0.67 | DEthreader | | ----------------KVQIKKVPS---L-KILNTLIR--NLKDQRLLLVMKDSNG---------NFEIQRLDFLNISVLNYDNYHRIWF------EYAEIQLKYISVDVVGRLYSLCINDFSKCLR--P-------IAISNEQLKMDLGFESLMHCLRQAELEFAEWVDAVLLKYIDKPYYSIG--Y------NGRF------RAISYFLAKVRENLPKVITFWLAAASI--STEDCSVEAIWYFVLTQLLSRL---I--SLAVEYPILYITALNSNSRVLRGK-IL--KYRQHS-NHD--S----------------------------------------------------------VAPSAMVVPICKDVRQDNQYQFTMLLKDIASRRAVMAMVGHILGL--L---GKVLHLLTFKKSSEVT----------------------- |
10 | 3czjA | 0.06 | 0.06 | 2.61 | 0.89 | MapAlign | | LNGEWRFAWFPAPTENPTGCYSLFSRAVLEAEV--QMCGELRDYLRVTVSLWQASGTLRLNVENPYRAVVELHNGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETHGMVPMNRLTDDPRWLPAMSERVTRMVQRDWSLGTESGHGANHDALYRWIKSVDPSRPVQYEGGGADTTATDIICPMYARVDEDQGETRPLILCEYAHAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFDRQFCMNGLVFADRTPHPALTEAKHQQQFFQFRLSGQTIESAGQLWLTVRVVQPNATAWSEAGHISAWQQWRLAENLSVTLPAASHAIPHLTTSEMDFCIELGNKRWQ-FNRQSGFLSQMWCTAITTAHAWQHQGKTLFISRKTYRIDGSGQM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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