>Q07866 (165 residues) MYDNMSTMVYIKEDKLEKLTQDEIISKTKQVIQGLEALKNEHNSILQSLLETLKCLKKDD ESNLVEEKSNMIRKSLEMLELGLSEAQVMMALSNHLNAVESEKQKLRAQVRRLCQENQWL RDELANTQQKLQKSEQSVAQLEEEKKHLEFMNQLKKYDDDISPSE |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MYDNMSTMVYIKEDKLEKLTQDEIISKTKQVIQGLEALKNEHNSILQSLLETLKCLKKDDESNLVEEKSNMIRKSLEMLELGLSEAQVMMALSNHLNAVESEKQKLRAQVRRLCQENQWLRDELANTQQKLQKSEQSVAQLEEEKKHLEFMNQLKKYDDDISPSE |
Prediction | CCCHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC |
Confidence | 952134322310003654148899999999999999999999999999999997412210123339999999999999983503799999999999999999999999999999999999999999999999999999999999999999999743588888789 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MYDNMSTMVYIKEDKLEKLTQDEIISKTKQVIQGLEALKNEHNSILQSLLETLKCLKKDDESNLVEEKSNMIRKSLEMLELGLSEAQVMMALSNHLNAVESEKQKLRAQVRRLCQENQWLRDELANTQQKLQKSEQSVAQLEEEKKHLEFMNQLKKYDDDISPSE |
Prediction | 745412210214563155145650353144024315303531441354045416536566545245422530452154134415423013201510642434444254424303542420363155036413633541251454452251135046146766788 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 | | | | | | | | | |||||||||||||
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SS Seq | CCCHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC MYDNMSTMVYIKEDKLEKLTQDEIISKTKQVIQGLEALKNEHNSILQSLLETLKCLKKDDESNLVEEKSNMIRKSLEMLELGLSEAQVMMALSNHLNAVESEKQKLRAQVRRLCQENQWLRDELANTQQKLQKSEQSVAQLEEEKKHLEFMNQLKKYDDDISPSE | |||||||||||||||||||
1 | 2tmaA1 | 0.18 | 0.14 | 4.54 | 1.02 | FFAS-3D | ------------KKKMQMLKLDNALDRAEQAEADKKAAEDRSKQLEDELVS-------------LQKKLKGTEDELDKYSEALKDAEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQ------------ | |||||||||||||
2 | 5nenA | 0.03 | 0.02 | 1.45 | 1.17 | DEthreader | -----------------SDGIRFQLKGLQDSRGNKQIQLSSLREQMNSMKQLAA-DG---YLP--RNRYLEVQRQFAEVNSSIDETVGRIGQLQKQLLESQQRIDQRFADYQREVRTQLAQTQMDASEFRNKLQMADFDLGNTA--ITSP-DGTVVGL------- | |||||||||||||
3 | 6f1tX2 | 0.11 | 0.05 | 1.97 | 1.05 | HHsearch | -----------------------------------------------------------------------------------QHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQGHDKDLQLHQSQLELQEVRLSYRQGGGG | |||||||||||||
4 | 3pltA | 0.13 | 0.12 | 4.02 | 0.62 | CEthreader | -------------GPELARKLSQLVKTEKGVLRAMEVVASERREAAKQLSLWGADNDDDVS-DVTDKLGVLIYELGELQDQFIDKYDQYRVTLKSIRNIEASVQPSRDRKEKITDEIAHLKYKDPQST-KIPVLEQELVRAEAESLVAEAQLSNITREKLKAAYS | |||||||||||||
5 | 4iloA | 0.16 | 0.16 | 5.42 | 0.73 | EigenThreader | QNELAKIQALKTDIRRKVEEKEQEMEKLKDQIKGGEKRIQEISDQINKLENQQAAVKKMDEFNALTQEMTAANKERRTLEHQLSDLMDKQAGSEDLLISLKESLSSTENSSSAIEEEIRENIRKINEEGRSLLSQRTQLKERLLNNKKQHENLVRKQDHLVEHCS | |||||||||||||
6 | 3hhmB2 | 0.10 | 0.08 | 2.92 | 1.01 | FFAS-3D | ----------------EAVGKHEYNTQFQEKSREYDRLYEEYTRTSQEIQMKRTAIEA------FNETIKIFEEQCQTQERYSKEYIEKFKREKEIQRIMHNYDKLKSRISEIIDSRRRLEEDLKKQAAEYREIDKRMNSIKPDLIQLRKTRD------------ | |||||||||||||
7 | 5cwjA | 0.09 | 0.08 | 3.19 | 0.81 | SPARKS-K | EQERIRRILEARKSG----TEESLRQAIEDVAQLAKKSSEVLEEAIRVILRIAKESG-------SEEALRQAIRAVAEIAKEAQDSEVLEEAIRVILRIAKESEALRQAIRAVAEIAKEAPRVLEEAIRVIRQIAEESGSEEARRQAERAEEEIRRRAQ------ | |||||||||||||
8 | 5j1gA | 0.11 | 0.10 | 3.49 | 0.67 | CNFpred | --------------------CAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLALPEPSPAAPTLRSELELTLGKLEQVRSLAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEA-EATKASLKKLRAQAEAQQPTFDALRDELRGAEVGERLQQRHGERDVEV | |||||||||||||
9 | 6irdB | 0.09 | 0.08 | 3.01 | 1.17 | DEthreader | -------------------AHAEHSTMQKLHCTQVDKIVAQYDKEKSTHEKILEKAMCLEIKKETEIKIQTLTTDHKSKVKEIVAQHTEWSEMINTHSAEEQEIRDLHLSQQCELLRKLLINAHEQQTQQLKLSHDRESKEMRAHQAKISMENSKAISQDKIKNK | |||||||||||||
10 | 6yvuA | 0.10 | 0.10 | 3.78 | 0.84 | MapAlign | RKEELVSTLADGGYNAQLAKAKTELNEVSLAIKKSSMKMELLKKELLTIEPKLKEALDANPSSQIIARNEEILRDIGECENEIKTKQMSLKKCQEEVSTIEKKKELKLLAKELEEQESESERKYDLFQNLELETEQLSSELDSNKTLLHNHLKSIESLKLENSDL | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |