Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCSCSCCCCCSCCCCCCCCCCCCCCCSSSCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCSSSCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCSSCCCSSC DILEVHLPHAQPQDAGVYSARYIGGNLFTSAFTRLIVRRCEAQKWGPECNHLCTACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQGCLCSPGWQGLQCELPKPLNAPNVIDTGHNFAVINISSEPYFGDGPIKSKKLLYKPVNHYEAWQHIQVTNEIVT |
1 | 3opbA | 0.07 | 0.06 | 2.35 | 0.83 | DEthreader | | IHFKLFMSS--------LIVEA--DVGNDPLSVFELLLSCR--LQIYSALIQLSEFI----KVEMSVALASL--RESFTILLFNEKYIL---RTELISF------FIPQLA-QGAVMLIFTNPGLIFKKSAL--LTNLAVHIVWIEML-LLIMMSHPIAFFFNVLRAVAIFKELIENIQVFQDDIERLLLF-YPL-------QENQKKALSLDSGPEFSAAPVILAKIK- |
2 | 2gy5A2 | 0.98 | 0.57 | 15.83 | 3.41 | SPARKS-K | | ----------------------------------------EAQKWGPECNHLCTACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQGCLCSPGWQGLQCERE---------------------------------------------------------- |
3 | 2gy5A | 0.61 | 0.60 | 17.19 | 1.13 | MapAlign | | --LILINSLPLVSDAETSLTCIADVTREWAKKVVWKRRRCEAQKWGPECNHLCTACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQGCLCSPGWQGLQCEREGTNEEMTLVKPDGTVLHPKSVAIFTIHRILPPDSGVWVCSVNTVAGMVEKPFNISVK- |
4 | 2gy5A | 0.75 | 0.75 | 21.31 | 0.87 | CEthreader | | DILEVHLPHAQPQDAGVYSARYIGGNLFTSAFTRLIVRRCEAQKWGPECNHLCTACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQGCLCSPGWQGLQCEREGIPRMTPKIVDLPDHIEVNSGKFNPICKASGWPLPTNEEMTLVKPDGTVLHPKDFNHT |
5 | 2gy5A2 | 0.98 | 0.57 | 15.83 | 2.40 | MUSTER | | ----------------------------------------EAQKWGPECNHLCTACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQGCLCSPGWQGLQCERE---------------------------------------------------------- |
6 | 2gy5A2 | 0.98 | 0.57 | 15.83 | 1.85 | HHsearch | | ----------------------------------------EAQKWGPECNHLCTACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQGCLCSPGWQGLQCERE---------------------------------------------------------- |
7 | 2gy5A2 | 0.98 | 0.57 | 15.83 | 1.16 | FFAS-3D | | ----------------------------------------EAQKWGPECNHLCTACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQGCLCSPGWQGLQCERE---------------------------------------------------------- |
8 | 3fcsB2 | 0.15 | 0.13 | 4.56 | 1.03 | EigenThreader | | VELEVRDLPEGDGCPQEKEKSFTI-KPVGFKDSLVQVTFDCDCAC----QAQAEPNSHRCNFEC--GVCRCGPGWLGSQCECSEEQDECSPREGQPRYKGEMCSGHGQCSCG--DCLCDSDWTGYYCNCRTDTCM----SSNGLLCSGRGKCEC--GSCVCIQSYGDTCEKCPTCPDACTFKKECVECKKFDRGALCNRYCRDEIESCTYKNED---DCVVRFQYVEEPE |
9 | 4k0vA | 0.98 | 0.74 | 20.71 | 4.55 | CNFpred | | DILEVHLPHAQPQDAGVYSARYIGGNLFTSAFTRLIVRRCEAQKWGPECNHLCTACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQGCLCSPGWQGLQCEREG--------------------------------------------------------- |
10 | 6yejA | 0.07 | 0.06 | 2.50 | 0.83 | DEthreader | | QRIKICVRAVALHPESFFSKLYKPLDEEQYVSDILCLICCVMSLCSSSYSEGLIDFRLVS-L----LLQVLVVILL--LFYRVAAVSHEL--STLTCCILTLLSS-------DAILAGLAMV--L-SHLLLSQILEL-MVCQQLLKTLFGTRLF----L---IL-FELYVTLTLAQYVPCKAAVLGMVSLLETLR--S---SHLSRVALVVLDLDDTAKQLIPVISDYLL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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