>P25445 (166 residues) MLGIWTLLPLVLTSVARLSSKSVNAQVTDINSKGLELRKTVTTVETQNLEGLHHDGQFCH KPCPPGERKARDCTVNGDEPDCVPCQEGKEYTDKAHFSSKCRRCRLCDEGHGLEVEINCT RTQNTKCRCKPNFFCNSTVCEHCDPCTKCEHGIIKECTLTSNTKCK |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MLGIWTLLPLVLTSVARLSSKSVNAQVTDINSKGLELRKTVTTVETQNLEGLHHDGQFCHKPCPPGERKARDCTVNGDEPDCVPCQEGKEYTDKAHFSSKCRRCRLCDEGHGLEVEINCTRTQNTKCRCKPNFFCNSTVCEHCDPCTKCEHGIIKECTLTSNTKCK |
Prediction | CCCSHHHHHHHHHHCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCSSCCCCSSCCCCCCCCSSSCCCCCCCCCCCSSSCCCCCSSCCCCCCCCCCSCCCCCCCCCCCSSSCCCCCCCCCSSCCCCCSSSCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCC |
Confidence | 9420677888863234456777776411368775312564243236788865557986638999992571268899988711117999652478899985615777777678178637878888546289983567999711436887999848248788776169 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MLGIWTLLPLVLTSVARLSSKSVNAQVTDINSKGLELRKTVTTVETQNLEGLHHDGQFCHKPCPPGERKARDCTVNGDEPDCVPCQEGKEYTDKAHFSSKCRRCRLCDEGHGLEVEINCTRTQNTKCRCKPNFFCNSTVCEHCDPCTKCEHGIIKECTLTSNTKCK |
Prediction | 4322333222312121331455352433435463143444254353525734156253016514334323541556574441441552441254434364143144145434343344134444240414723113674254145146156134661466533558 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 | | | | | | | | | |||||||||||||
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SS Seq | CCCSHHHHHHHHHHCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCSSCCCCSSCCCCCCCCSSSCCCCCCCCCCCSSSCCCCCSSCCCCCCCCCCSCCCCCCCCCCCSSSCCCCCCCCCSSCCCCCSSSCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCC MLGIWTLLPLVLTSVARLSSKSVNAQVTDINSKGLELRKTVTTVETQNLEGLHHDGQFCHKPCPPGERKARDCTVNGDEPDCVPCQEGKEYTDKAHFSSKCRRCRLCDEGHGLEVEINCTRTQNTKCRCKPNFFCNSTVCEHCDPCTKCEHGIIKECTLTSNTKCK | |||||||||||||||||||
1 | 3qd6R | 0.27 | 0.19 | 5.72 | 1.00 | DEthreader | -----------------------------------------------CREKQYLINSQCCSLCQPGQKL-VSDCTEFTETECLPCGE-SEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGWHCTSEACESCVLHR-SC---KQIATGVSDTICE | |||||||||||||
2 | 3qd6R | 0.30 | 0.20 | 6.21 | 3.87 | SPARKS-K | -----------------------------------------------CREKQYLINSQCCSLCQPGQKLVSDC-TEFTETECLPCGES-EFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGWHCTSEACESCVLHRSCK----QIATGVSDTICE | |||||||||||||
3 | 3ij2X | 0.27 | 0.19 | 5.74 | 0.82 | MapAlign | ---------------------------------------------ETCSTGLYTHSGECCKACNLGEGVAQPCGA--DQTVCEPCLDSVTFSDVVSATEPCKPCTEC--LGLQSMSAPCVEADDAVCRCAYGYYQDEETG-HCEACSVCESGLVFSCQDKQNTVCE | |||||||||||||
4 | 3ij2X | 0.27 | 0.19 | 5.74 | 0.67 | CEthreader | ---------------------------------------------ETCSTGLYTHSGECCKACNLGEGVAQPCG--ADQTVCEPCLDSVTFSDVVSATEPCKPCTECLG--LQSMSAPCVEADDAVCRCAYGYYQDEE-TGHCEACSVCEVGLVFSCQDKQNTVCE | |||||||||||||
5 | 5dmjA | 0.31 | 0.22 | 6.73 | 1.89 | MUSTER | ---------------------------------------------TACREKQYLINSQCCSLCQPGQKLVSDCTEF-TETECLPCGES-EFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGWHCTSEACESCVLHRSCSPGVKQIATGVSDTICE | |||||||||||||
6 | 3qd6R | 0.31 | 0.21 | 6.37 | 1.75 | HHsearch | -----------------------------------------------CREKQYLINSQCCSLCQPGQKLVSDCTE-FTETECLPCGES-EFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGWHCTSEACESCVLHRSC----KQIATGVSDTICE | |||||||||||||
7 | 3qd6R | 0.30 | 0.20 | 6.21 | 1.12 | FFAS-3D | -----------------------------------------------CREKQYLINSQCCSLCQPGQKLVSDCTEFTE-TECLPCGES-EFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGWHCTSEACESCVLHRSCKQ----IATGVSDTICE | |||||||||||||
8 | 2uwiA | 0.24 | 0.17 | 5.27 | 1.03 | EigenThreader | ---------------------------------------------CEQGVSYYNQELKCCKLCKPGTYSDHRCDK-YSDTICGHCP-SDTFTSIYNRSPWCHSCRGPCGT-NRVEVTPCTPTTNRICHCDSNSYCLSDGNCVCAKTKCGRGYGKKGEDEMGNTICK | |||||||||||||
9 | 1extA | 0.24 | 0.17 | 5.44 | 2.42 | CNFpred | ---------------------------------------------SVCPQGKYIHNSICCTKCHKGTYLYNDCPGPGQDTDCRECES-GSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVCGCRKNQYRHYWNLFQCFNCSLCLNGTHLSCQEKQNTVCT | |||||||||||||
10 | 3ij2X | 0.21 | 0.14 | 4.60 | 0.83 | DEthreader | ----------------------------------------------ETCSTGLYTHSGECKACNLGEGVAQPCGAD--QTVCEPCLDSVTFSDVVSATEPCKPCTECL-GL-QSMSAPCVEADDAVCRCAYGYYQDEET-GHCEACSVCEVGSGLVSCQQNTVCEE | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |