>A0A597 (114 residues) MGPGLLCWVLLCLLGAGPVDAGVTQSPTHLIKTRGQQVTLRCSPISGHKSVSWYQQVLGQ GPQFIFQYYEKEERGRGNFPDRFSARQFPNYSSELNVNALLLGDSALYLCASSL |
Sequence |
20 40 60 80 100 | | | | | MGPGLLCWVLLCLLGAGPVDAGVTQSPTHLIKTRGQQVTLRCSPISGHKSVSWYQQVLGQGPQFIFQYYEKEERGRGNFPDRFSARQFPNYSSELNVNALLLGDSALYLCASSL |
Prediction | CCCHHHHHHHHHHCCCCCSCCSSSSCCCSSSCCCCCSSSSSSSCCCCCCSSSSSSCCCCCCCSSSSSSSCCCCCCCCCCCCCCCSSCCCCCCSSSSSCCCCCCCCSSSSSSCCC |
Confidence | 973799999999705576032345239724346993199999836999737983118999867899980776356789998821266899820788735891134777532369 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | MGPGLLCWVLLCLLGAGPVDAGVTQSPTHLIKTRGQQVTLRCSPISGHKSVSWYQQVLGQGPQFIFQYYEKEERGRGNFPDRFSARQFPNYSSELNVNALLLGDSALYLCASSL |
Prediction | 833330220222133223331323033443354444403042344443320120113445323100112466536756136302153476341404054344603032143337 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCHHHHHHHHHHCCCCCSCCSSSSCCCSSSCCCCCSSSSSSSCCCCCCSSSSSSCCCCCCCSSSSSSSCCCCCCCCCCCCCCCSSCCCCCCSSSSSCCCCCCCCSSSSSSCCC MGPGLLCWVLLCLLGAGPVDAGVTQSPTHLIKTRGQQVTLRCSPISGHKSVSWYQQVLGQGPQFIFQYYEKEERGRGNFPDRFSARQFPNYSSELNVNALLLGDSALYLCASSL | |||||||||||||||||||
1 | 3wbdA | 0.19 | 0.18 | 5.68 | 1.33 | DEthreader | PV------LQKQSPKPGGSQIQLQQSG-PELVRPGASVKISCKASYTFYYIHWVKQRPGEGLEWIGWIYSGNTKYNEKFKGKATLTVDTSSTAYMQLSSLTSEDSAVYFCARGG | |||||||||||||
2 | 6wl2C1 | 0.56 | 0.46 | 13.38 | 1.13 | SPARKS-K | --------------------SGVVQSPRHIIKEKGGRSVLTCIPISGHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPCRFSVQQFDDYHSEMNMSALELEDSAMYFCASSL | |||||||||||||
3 | 6vy5H | 0.22 | 0.18 | 5.55 | 0.47 | MapAlign | --------------------VQLLESG-GGLIQPGGSLRLSCAASGSRFTMSWVRQPPGKGPEWVSGISGGHTYYADSVKGRFTISRDSKNTLYLQMNSLKAEDTAVYYCAKDG | |||||||||||||
4 | 6vy5H2 | 0.21 | 0.18 | 5.56 | 0.30 | CEthreader | -------------------EVQLLESG-GGLIQPGGSLRLSCAASGFRFTMSWVRQPPGKGPEWVSGISGGHTYYADSVKGRFTISRDSKNTLYLQMNSLKAEDTAVYYCAKDG | |||||||||||||
5 | 5ivxF1 | 0.31 | 0.25 | 7.69 | 1.11 | MUSTER | --------------------MKVTQMPRYLIKRMGENVLLECGQDMSHETMYWYRQDPGLGLQLIYISYDVDSNSEGDIPKGYRVSRKKREHFSLILDSAKTNQTSVYFCASSL | |||||||||||||
6 | 6jxrm | 0.30 | 0.23 | 6.93 | 0.38 | HHsearch | ----------------------VEQDPGPLSVPEGAIVSLNCTYSNAFQYFMWYRQYSRKGPELLMYTYSS----GNKEDGRFTAQVDSSKYISLFIRDSQPSDSATYLCAMSK | |||||||||||||
7 | 6v0yE1 | 0.31 | 0.25 | 7.68 | 1.67 | FFAS-3D | ---------------------AVFQTPNYHVTQVGNEVSFNCKQTLGHDTMYWYKQDSKKLLKIMFSYNNKQLIVNETVPRRFSPQSSDKAHLNLRIKSVEPEDSAVYLCASSL | |||||||||||||
8 | 1bwmA2 | 0.24 | 0.23 | 7.10 | 0.37 | EigenThreader | SDYKDDDDKRSGGGGSGGAQQQVRQSPQSLTVWEGETTILNCSYEDTFDYFPWYRQFP-GKSPALLAISLVSEDG------RFTIFFNREKKLSLHITDSQPGDSATYFCAATG | |||||||||||||
9 | 5nmdB | 0.89 | 0.75 | 20.96 | 1.65 | CNFpred | -------------------DAGVTQSPTHLIKTRGQQVTLRCSPKQGHDTVSWYQQALGQGPQFIFQYYEEEERQRGNFPDRFSGHQFPNYSSELNVNALLLGDSALYLCASSD | |||||||||||||
10 | 2gjjA | 0.17 | 0.16 | 5.20 | 1.33 | DEthreader | PV------QQKQSPKLKSGEVQLQQSG-PEVVKTGASVKISCKASYFGYFINWVKKNSGKSPEWIGHISYATSTYNQKFKNKAAFTVDTSSTAFMQLNSLTSEDSADYYCVRSG | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |