>A0A0G2JMM0 (110 residues) GLCGKPSLSAQPRPMVKAGESVTLSCSSRSSYDIYHLSREGEAHELRFPAVPKVNGTFQA NFPLGPATHGGTYRCFGSFRDSPYEWSDLSDPLLVSVTDSMKEKGKDVIL |
Sequence |
20 40 60 80 100 | | | | | GLCGKPSLSAQPRPMVKAGESVTLSCSSRSSYDIYHLSREGEAHELRFPAVPKVNGTFQANFPLGPATHGGTYRCFGSFRDSPYEWSDLSDPLLVSVTDSMKEKGKDVIL |
Prediction | CCCCCCSSSSCCCCCCCCCCCSSSSSSCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCSSSSSSSSCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCC |
Confidence | 99999936754788435898489999657897499999579887751234125897369999757755583899988658998655689986799983849999965459 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | GLCGKPSLSAQPRPMVKAGESVTLSCSSRSSYDIYHLSREGEAHELRFPAVPKVNGTFQANFPLGPATHGGTYRCFGSFRDSPYEWSDLSDPLLVSVTDSMKEKGKDVIL |
Prediction | 86464230213443404464302010215433320222244655344355454662423040304434441201012244543231154233040203353663514346 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCSSSSCCCCCCCCCCCSSSSSSCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCSSSSSSSSCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCC GLCGKPSLSAQPRPMVKAGESVTLSCSSRSSYDIYHLSREGEAHELRFPAVPKVNGTFQANFPLGPATHGGTYRCFGSFRDSPYEWSDLSDPLLVSVTDSMKEKGKDVIL | |||||||||||||||||||
1 | 7k80G | 0.37 | 0.36 | 10.79 | 1.33 | DEthreader | -NHRKPSLLAHPGPLVKSGERVILQCWSDIMFEHFFLHKEGKDPSRLV--GQIHDGVSKANFSIGPMMLAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSYGSPY | |||||||||||||
2 | 1b6uA2 | 0.85 | 0.78 | 22.03 | 1.28 | SPARKS-K | GLYEKPSLSAQPGPTVLAGESVTLSCSSRSSYDMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPATHGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNP--------- | |||||||||||||
3 | 6grqA | 0.35 | 0.31 | 9.24 | 0.66 | MapAlign | --HYKPRLSVLPSPVVTAGGNMTLHCASDFHYDKFILTKEDKKFGNSLDTEHISSRQYRALFIIGPTTHTGTFRCYGYFKNAPQLWSVPSDLQQILISGL---------- | |||||||||||||
4 | 6grqA | 0.32 | 0.32 | 9.59 | 0.51 | CEthreader | YEHYKPRLSVLPSPVVTAGGNMTLHCASDFHYDKFILTKEDKKFGNSLTEHISSSRQYRALFIIGPTTHTGTFRCYGYFKNAPQLWSVPSDLQQILISGLSKKPSLLTHQ | |||||||||||||
5 | 1b6uA2 | 0.85 | 0.78 | 22.03 | 1.40 | MUSTER | GLYEKPSLSAQPGPTVLAGESVTLSCSSRSSYDMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPATHGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNP--------- | |||||||||||||
6 | 1efxD | 0.37 | 0.36 | 10.81 | 0.44 | HHsearch | -VHRKPSLLAHPGRLVKSEETVILQCWSDVRFEHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMLAGTYRCYGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAVL | |||||||||||||
7 | 1efxD2 | 0.87 | 0.77 | 21.75 | 1.59 | FFAS-3D | GLYEKPSLSAQPGPTVLAGESVTLSCSSRSSYDMYHLSREGEAHECRFSAGPKVNGTFQADFPLGPATHGGTYRCFGSFRDSPYEWSNSSDPLLVSVI------------ | |||||||||||||
8 | 6grqA2 | 0.30 | 0.30 | 9.09 | 0.38 | EigenThreader | GLSKKPSLLTHQGHILDPGMTLTLQCYSDINYDRFALHKVGGADIMQHSSQQTDTGFSVANFTLVSSSTGGQYRCYGAHNLSSEW-SASSEPLDILITGQKEGSAQQPLG | |||||||||||||
9 | 1nkrA | 0.86 | 0.76 | 21.51 | 1.86 | CNFpred | GLYEKPSLSAQPGPTVLAGENVTLSCSSRSSYDMYHLSREGEAHERRLPAGPKVNGTFQADFPLGPATHGGTYRCFGSFHDSPYEWSKSSDPLLVSVT------------ | |||||||||||||
10 | 3vh8G | 0.37 | 0.36 | 10.79 | 1.33 | DEthreader | -NHRKPSLLAHPGPLVKSGERVILQCWSDIMFEHFFLHKEGIDPSRLV--GQIHDGVSKANFSIGPMMLAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSYGSPY | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |