Zhang Lab

National University of Singapore

Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

GLASS

You can:

Go to the GPCR, ligand, or experimental data tables.
Go to the experimental data table for text mining information in PubMed ID column.
Go to the GPCR page and check other ligands which interact with it.
Go to the ligand page and check other GPCRs which it interacts with.
Go back to previous page.

GPCR

Name	Lysophosphatidic acid receptor 5
Species	Homo sapiens (Human)
Gene	LPAR5
Synonym	G-protein coupled receptor 92 LPAR5 LPA5 receptor LPA-5 LPA receptor 5 G protein-coupled receptor 92 GPR92 G-protein coupled receptor 93 GPR93 [ Show all ]
Disease	N/A
Length	372
Amino acid sequence	MLANSSSTNSSVLPCPDYRPTHRLHLVVYSLVLAAGLPLNALALWVFLRALRVHSVVSVYMCNLAASDLLFTLSLPVRLSYYALHHWPFPDLLCQTTGAIFQMNMYGSCIFLMLINVDRYAAIVHPLRLRHLRRPRVARLLCLGVWALILVFAVPAARVHRPSRCRYRDLEVRLCFESFSDELWKGRLLPLVLLAEALGFLLPLAAVVYSSGRVFWTLARPDATQSQRRRKTVRLLLANLVIFLLCFVPYNSTLAVYGLLRSKLVAASVPARDRVRGVLMVMVLLAGANCVLDPLVYYFSAEGFRNTLRGLGTPHRARTSATNGTRAALAQSERSAVTTDATRPDAASQGLLRPSDSHSLSSFTQCPQDSAL
UniProt	Q9H1C0
Protein Data Bank	N/A
GPCR-HGmod model	Q9H1C0
3D structure model	This predicted structure model is from GPCR-EXP Q9H1C0.
BioLiP	N/A
Therapeutic Target Database	N/A
ChEMBL	CHEMBL5700
IUPHAR	124
DrugBank	N/A

Ligand

Name	1-Oleoyl Lysophosphatidic Acid
Molecular formula	C21H41O7P
IUPAC name	[(2R)-2-hydroxy-3-phosphonooxypropyl] (Z)-octadec-9-enoate
Molecular weight	436.526
Hydrogen bond acceptor	7
Hydrogen bond donor	3
XlogP	5.2
Synonyms	Epitope ID:158640 LPA(18:1/0:0) Lysophosphatidic acid(18:1/0:0) NKP ZINC8860530 1-O-oleyl-sn-glycerol 3-phosphate 1-oleyl-sn-glycerol 3-phosphate 9-Octadecenoic acid (Z)-, 2-hydroxy-3-(phosphonooxy)propyl ester, (R)- HMS3650F05 LysoPA(18:1(9Z)/0:0) MolPort-009-019-282 SCHEMBL1560791 (2R)-2-hydroxy-3-(phosphonooxy)propyl (9Z)-octadec-9-enoate 1-Oleoyl-L-.alpha.-lysophosphatidic acid 1293AH BSPBio_001406 LPA 18:1 lysophosphatidic acid NCGC00161386-02 UNII-PG6M3969SG component WRGQSWVCFNIUNZ-GDCKJWNLSA-N 1-O-9Z-Octadecenoyl-sn-glyceryl-3-phosphoric acid 1-oleoylglycerol 3-phosphate 65528-98-5 HMS1791G08 LPA(18:1n9/0:0) Lysophosphatidic acid(18:1n9/0:0) PA(18:1(9Z)/0:0) [(2R)-2-hydroxy-3-phosphonooxypropyl] (Z)-octadec-9-enoate 1-oleylglycerol 3-phosphate AC1NSKBQ C21H41O7P IDI1_033876 LysoPA(18:1) Monooleylphosphatidic acid SR-01000946335 (R)-Octadec-9-enoic acid 2-hydroxy-3-phosphonooxy-propyl ester 1-Oleoyl-sn-glycero-3-phosphate 18:1 LPA CHEMBL117021 LPA(18:1(9Z)/0:0) Lysophosphatidic acid(18:1) NCGC00161386-03 WRGQSWVCFNIUNZ-GDCKJWNLSA-N 1-O-oleoyl-sn-glycerol 3-phosphate 1-oleyl-2-lyso-sn-glycerol 3-phosphatidic acid 9-Octadecenoic acid (9Z)-, 2-hydroxy-3-(phosphonooxy)propyl ester HMS1989G08 LPA(18:1w9/0:0) Lysophosphatidic acid(18:1w9/0:0) PA(18:1/0:0) (2r)-2-Hydroxy-3-(Phosphonooxy)propyl (9e)-Octadec-9-Enoate 1-oleoyl-2-lyso-sn-glycerol 3-phosphatidic acid 1-Oleyllysophosphatidic acid BDBM50148348 CHEBI:62837 LMGP10050008 LysoPA(18:1w9/0:0) NCGC00161386-01 SR-01000946335-1 1-(9Z-octadecenoyl)-sn-glycero-3-phosphate 1-Oleoyl-sn-glycerol 3-phosphate [ Show all ]
Inchi Key	WRGQSWVCFNIUNZ-GDCKJWNLSA-N
Inchi ID	InChI=1S/C21H41O7P/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-21(23)27-18-20(22)19-28-29(24,25)26/h9-10,20,22H,2-8,11-19H2,1H3,(H2,24,25,26)/b10-9-/t20-/m1/s1
PubChem CID	5311263
ChEMBL	CHEMBL117021
IUPHAR	N/A
BindingDB	50148348
DrugBank	N/A
Structure SDF download
Lipinski's druglikeness	This ligand has a partition coefficient log P greater than 5.

Experimental Data

Parameter	Value	Reference	Database source
EC50	12.0 nM	PMID20056548	BindingDB,ChEMBL
EC50	54.95 nM	PMID23395664	ChEMBL
EC50	55.0 nM	PMID23395664	BindingDB,ChEMBL
EC50	510.0 nM	PMID25100502	BindingDB,ChEMBL
Intrinsic activity	1.0 -	PMID23395664	ChEMBL

zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417