What is new in BioLiP2?
BioLiP2 is a major update released in Febuary 2023. New additions and modifications are listed below.| Feature | BioLiP2 | BioLiP1 |
|---|---|---|
| Database search | Search by name, sequence and structure. | Search by name only |
| Nucleic acid ligands | All DNA/RNA ligands regardless of length. Differentiate DNA vs RNA. | <30 nucleotides only. Do not differentiate DNA vs RNA. |
| Nucleic acid sequences | Viewable and searchable. | Do not include. |
| Source data | mmCIF/PDBx format files from the PDB database. | Legacy PDB format files from the PDB database. |
| Gene Ontology (GO) terms | List GO terms and draws directed acyclic graphs for GO terms and their parents. | Only list terms. |
| Information for small molecule ligands | PDB ligand ID, chemical formula, InChI, SMILES, crosslinks to external small molecule databases (ChEMBL, DrugBank, ZINC), structure, full name. | PDB ligand ID, chemical formula, structure, full name. |
| Source code | Fully open-source. | Unavailable. |
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