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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP

PDB CCD ID: VV1
Number of entries in BioLiP: 6
Chemical formula: C9 H18 B N2 O5
InChI: InChI=1S/C9H18BN2O5/c13-8(14)7-9(2-1-3-10(15,16)17)5-12-6(9)4-11-7/h6-7,11-12,15-17H,1-5H2,(H,13,14)/q-1/t6-,7+,9-/m0/s1
InChIKey: BCFOBXHGEQBWQU-OOZYFLPDSA-N
SMILES:
SoftwareSMILES
ACDLabs 12.01O=C(O)C1NCC2NCC12CCC[B-](O)(O)O
OpenEye OEToolkits 2.0.7[B-](CCC[C@]12CN[C@H]1CN[C@@H]2C(=O)O)(O)(O)O
CACTVS 3.385OC(=O)[CH]1NC[CH]2NC[C]12CCC[B-](O)(O)O
OpenEye OEToolkits 2.0.7[B-](CCCC12CNC1CNC2C(=O)O)(O)(O)O
CACTVS 3.385OC(=O)[C@H]1NC[C@@H]2NC[C@]12CCC[B-](O)(O)O
Name:3-[(1~{S},2~{S},5~{R})-2-carboxy-3,6-diazabicyclo[3.2.0]heptan-1-yl]propyl-$l^{3}-oxidanyl-bis(oxidanyl)boranuide

Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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