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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP

PDB CCD ID: T1O
Number of entries in BioLiP: 6
Chemical formula: C13 H21 N3 O3 S
InChI: InChI=1S/C13H21N3O3S/c1-8(17)6-14-11(18)5-3-2-4-10-12-9(7-20-10)15-13(19)16-12/h9-10,12H,2-7H2,1H3,(H,14,18)(H2,15,16,19)/t9-,10+,12-/m0/s1
InChIKey: NVGARBFYWDPYAF-UMNHJUIQSA-N
SMILES:
SoftwareSMILES
CACTVS 3.385CC(=O)CNC(=O)CCCC[CH]1SC[CH]2NC(=O)N[CH]12
CACTVS 3.385CC(=O)CNC(=O)CCCC[C@H]1SC[C@@H]2NC(=O)N[C@H]12
OpenEye OEToolkits 2.0.6CC(=O)CNC(=O)CCCCC1C2C(CS1)NC(=O)N2
OpenEye OEToolkits 2.0.6CC(=O)CNC(=O)CCCC[C@@H]1[C@@H]2[C@H](CS1)NC(=O)N2
ACDLabs 12.01O=C2NC1C(SCC1N2)CCCCC(=O)NCC(=O)C
Name:5-[(3aS,4R,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]-N-(2-oxopropyl)pentanamide

Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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