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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP

PDB CCD ID: INJ
Number of entries in BioLiP: 10
Chemical formula: C14 H26 N3 O9 P
InChI: InChI=1S/C14H26N3O9P/c18-7-10(20)11(21)9(19)6-15-12-8(13(22)17-14(23)16-12)4-2-1-3-5-27(24,25)26/h9-11,18-21H,1-7H2,(H2,24,25,26)(H3,15,16,17,22,23)/t9-,10+,11-/m0/s1
InChIKey: BMATWAHJJFXMFA-AXFHLTTASA-N
SMILES:
SoftwareSMILES
OpenEye OEToolkits 1.5.0C(CCc1c(nc(nc1O)O)NCC(C(C(CO)O)O)O)CCP(=O)(O)O
OpenEye OEToolkits 1.5.0C(CCc1c(nc(nc1O)O)NC[C@@H]([C@@H]([C@@H](CO)O)O)O)CCP(=O)(O)O
ACDLabs 10.04O=P(O)(O)CCCCCc1c(O)nc(O)nc1NCC(O)C(O)C(O)CO
CACTVS 3.341OC[CH](O)[CH](O)[CH](O)CNc1nc(O)nc(O)c1CCCCC[P](O)(O)=O
CACTVS 3.341OC[C@@H](O)[C@@H](O)[C@@H](O)CNc1nc(O)nc(O)c1CCCCC[P](O)(O)=O
Name:5-(6-D-RIBITYLAMINO-2,4-DIHYDROXYPYRIMIDIN-5-YL)-1-PENTYL-PHOSPHONIC ACID
DrugBank: DB04266
ZINC: ZINC000003871086

Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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