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BioLiP

PDB CCD ID: DV3
Number of entries in BioLiP: 0
Chemical formula: C5 H11 O5 P S
InChI: InChI=1S/C5H11O5PS/c6-4-1-2-9-5(4)3-10-11(7,8)12/h4-6H,1-3H2,(H2,7,8,12)/t4-,5+/m0/s1
InChIKey: PPLIRDZWRNAVLB-CRCLSJGQSA-N
SMILES:
SoftwareSMILES
CACTVS 3.385O[CH]1CCO[CH]1CO[P](O)(S)=O
CACTVS 3.385O[C@H]1CCO[C@@H]1CO[P](O)(S)=O
OpenEye OEToolkits 2.0.6C1CO[C@@H]([C@H]1O)COP(=O)(O)S
ACDLabs 12.01O(P(S)(O)=O)CC1OCCC1O
OpenEye OEToolkits 2.0.6C1COC(C1O)COP(=O)(O)S
Name:1,4-anhydro-2-deoxy-5-O-thiophosphono-D-erythro-pentitol

Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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