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BioLiP

PDB CCD ID: 9WM
Number of entries in BioLiP: 1
Chemical formula: C11 H17 F N O7
InChI: InChI=1S/C11H16FNO7/c1-4(15)13-6-2-5(12)9(11(18)19)20-10(6)8(17)7(16)3-14/h5-8,10,14,16-17H,2-3H2,1H3,(H-,13,15,18,19)/p+1/t5-,6-,7-,8-,10-/m1/s1
InChIKey: JMALISIZGRCKCG-VRRGKTLJSA-O
SMILES:
SoftwareSMILES
CACTVS 3.385CC(=O)N[CH]1C[CH](F)C(=[O+][CH]1[CH](O)[CH](O)CO)C(O)=O
CACTVS 3.385CC(=O)N[C@@H]1C[C@@H](F)C(=[O+][C@H]1[C@H](O)[C@H](O)CO)C(O)=O
OpenEye OEToolkits 2.0.6CC(=O)N[C@@H]1C[C@H](C(=[O+][C@H]1[C@@H]([C@@H](CO)O)O)C(=O)O)F
OpenEye OEToolkits 2.0.6CC(=O)NC1CC(C(=[O+]C1C(C(CO)O)O)C(=O)O)F
ACDLabs 12.01OC(=O)C=1C(F)CC(C([O+]=1)C(O)C(CO)O)NC(=O)C
Name:(2~{R},3~{R},5~{R})-3-acetamido-5-fluoranyl-2-[(1~{R},2~{R})-1,2,3-tris(oxidanyl)propyl]-2,3,4,5-tetrahydropyran-1-ium-6-carboxylic acid

Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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