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BioLiP

PDB CCD ID: 9VP
Number of entries in BioLiP: 1
Chemical formula: C11 H18 F N O7
InChI: InChI=1S/C11H18FNO7/c1-4(15)13-6-2-5(12)9(11(18)19)20-10(6)8(17)7(16)3-14/h5-10,14,16-17H,2-3H2,1H3,(H,13,15)(H,18,19)/t5-,6-,7-,8-,9+,10-/m1/s1
InChIKey: AUOXJUOLLXNWIV-MMDZMLKVSA-N
SMILES:
SoftwareSMILES
CACTVS 3.385CC(=O)N[CH]1C[CH](F)[CH](O[CH]1[CH](O)[CH](O)CO)C(O)=O
OpenEye OEToolkits 2.0.6CC(=O)NC1CC(C(OC1C(C(CO)O)O)C(=O)O)F
OpenEye OEToolkits 2.0.6CC(=O)N[C@@H]1C[C@H]([C@H](O[C@H]1[C@@H]([C@@H](CO)O)O)C(=O)O)F
ACDLabs 12.01OC(=O)C1C(F)CC(C(O1)C(O)C(CO)O)NC(=O)C
CACTVS 3.385CC(=O)N[C@@H]1C[C@@H](F)[C@H](O[C@H]1[C@H](O)[C@H](O)CO)C(O)=O
Name:5-acetamido-2,6-anhydro-3,4,5-trideoxy-3-fluoro-D-erythro-L-gluco-nononic acid;
5-(acetylamino)-2,6-anhydro-3,4,5-trideoxy-3-fluoro-D-erythro-L-gluco-nononic acid

Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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