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BioLiP

PDB CCD ID: 56C
Number of entries in BioLiP: 0
Chemical formula: C14 H30 N7 O5
InChI: InChI=1S/C14H29N7O5/c15-12(13(22)23)2-1-3-18-14(16)19-4-6-24-8-10-26-11-9-25-7-5-20-21-17/h12,17H,1-11,15H2,(H3-,16,18,19,22,23)/p+1/t12-/m0/s1
InChIKey: WGFPPYKACPCFRG-LBPRGKRZSA-O
SMILES:
SoftwareSMILES
ACDLabs 12.01NC(C(=O)O)CCCN\C(=N)NCCOCCOCCOCC/N=[N+]=N
CACTVS 3.385N[CH](CCCNC(=N)NCCOCCOCCOCCN=[N+]=N)C(O)=O
OpenEye OEToolkits 1.9.2C(CC(C(=O)O)N)CNC(=N)NCCOCCOCCOCCN=[N+]=N
OpenEye OEToolkits 1.9.2[H]/N=C(\NCCC[C@@H](C(=O)O)N)/NCCOCCOCCOCCN=[N+]=N
CACTVS 3.385N[C@@H](CCCNC(=N)NCCOCCOCCOCCN=[N+]=N)C(O)=O
Name:N~5~-{N-[2-(2-{2-[2-(triaza-1,2-dien-2-ium-1-yl)ethoxy]ethoxy}ethoxy)ethyl]carbamimidoyl}-L-ornithine

Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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