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BioLiP

PDB CCD ID: 3XR
Number of entries in BioLiP: 2
Chemical formula: C8 H15 N2 O5
InChI: InChI=1S/C8H14N2O5/c1-3(11)10-7-6(13)5(12)4(2-9-7)8(14)15/h4-7,9,12-13H,2H2,1H3,(H,10,11)(H,14,15)/p+1/t4-,5-,6-,7+/m0/s1
InChIKey: DQTKLICLJUKNCG-ZTYPAOSTSA-O
SMILES:
SoftwareSMILES
CACTVS 3.385CC(=O)N[C@H]1[NH2+]C[C@@H]([C@H](O)[C@@H]1O)C(O)=O
OpenEye OEToolkits 1.9.2CC(=O)N[C@@H]1[C@H]([C@H]([C@H](C[NH2+]1)C(=O)O)O)O
CACTVS 3.385CC(=O)N[CH]1[NH2+]C[CH]([CH](O)[CH]1O)C(O)=O
OpenEye OEToolkits 1.9.2CC(=O)NC1C(C(C(C[NH2+]1)C(=O)O)O)O
ACDLabs 12.01O=C(NC1[NH2+]CC(C(=O)O)C(O)C1O)C
Name:(2S,3R,4S,5S)-2-(acetylamino)-5-carboxy-3,4-dihydroxypiperidinium

Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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