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BioLiP

PDB CCD ID: 1X4
Number of entries in BioLiP: 3
Chemical formula: C5 H11 O6 P
InChI: InChI=1S/C5H11O6P/c6-5-2-1-4(11-5)3-10-12(7,8)9/h4-6H,1-3H2,(H2,7,8,9)/t4-,5-/m0/s1
InChIKey: DOJAXCJBQVATEM-WHFBIAKZSA-N
SMILES:
SoftwareSMILES
CACTVS 3.385O[CH]1CC[CH](CO[P](O)(O)=O)O1
CACTVS 3.385O[C@@H]1CC[C@@H](CO[P](O)(O)=O)O1
OpenEye OEToolkits 1.7.6C1CC(OC1COP(=O)(O)O)O
OpenEye OEToolkits 1.7.6C1C[C@H](O[C@@H]1COP(=O)(O)O)O
ACDLabs 12.01O=P(OCC1OC(O)CC1)(O)O
Name:2,3-dideoxy-5-O-phosphono-alpha-D-ribofuranose;
2,3-dideoxyribose-5-phosphate;
2,3-dideoxy-5-O-phosphono-alpha-D-ribose;
2,3-dideoxy-5-O-phosphono-D-ribose;
2,3-dideoxy-5-O-phosphono-ribose
ZINC: ZINC000098208046
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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