>rna
uuuuauauauauauaauaaggaaaaguauuuauaagaauaugauguugguucagauuaagcgcuaaauaaggacaugaca
caugcgaaucauacguuuauuauugagauaauaaauaugugguguaaacgugaguaauuuuauuaggaauuaaugaacua
uagaauaagcuaaauacuuaauauuauauaaaaauaauuuauauaauaaaaaggauauauauauauauauuuaucuauag
ucaagccaauaaugguuuagguaguagguuuauuaagaguuaaaccuagccaacgauccauaaucgauaaugaaaguuag
aacgaucacguugacucugaaauauagucaauaucuauaagauacagcagugaggaauauuggacaaugaucgaaagauu
gauccaguuacuuauuaggaugauauauauauauauauaaauugauuaaaaauaaaauccauaaauaauuaaaauaauga
uauuaauuaccauauauuuauauggauauauauauauuuuaauaguccugacuaauauuugugccagcagucgcgguaac
acaaagagggcgagcguuaaucauaaugguuuaaaggauccguagaaugaauuauauauaauuuagaguuaauaaaauau
aauuaaagaauuauaauaaauuauaagacuaauauaugugaaaauauuaauuaaauauuaacugacauugagggauuaaa
acuagagucuaguaguaugaauacaauuauuuauaauauauauauaaauaauaaaugaaaaugaaaguauuccaccugaa
gaguacguuagcaauaaugaaacucaaaacaauagacgguuacagacuuaagcaguggagcauguuauuuaauucuacca
uauuuugaauauuauaauaauuauaauuauuauauuacaggcguuacauuguuaaugauccuuauaauauggguaauaga
cgugcuauaauaaaaugauaaaaaacauuuuaaauaugaaaaaagaauugcuaguaauacguaaauuaguauguuacggu
gaauauucuaacuguuucgcacuaaucacucaucacgcguugaaacauauuauuaucuuauuauuuauauaauauuuuuu
aauaaauauuauuaauuuauauuuauuuauaucagaaauaauaugaauuaaugcgaaguugaa

The query sequence (length=1183) is searched through a non-redundant set of database sequences rna_nr.fasta.gz clustered at 100% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	8d8j:a	1183	1183	1.0000	1.0000	1.0000	0.0
2	8d8k:a	1538	1008	0.7870	0.6053	0.9236	0.0
3	8d8k:a	1538	190	0.1606	0.1235	1.0000	3.82e-97
4	8d8k:a	1538	68	0.0533	0.0410	0.9265	7.11e-20
5	8d8l:a	1506	976	0.7599	0.5969	0.9211	0.0
6	8d8l:a	1506	190	0.1606	0.1262	1.0000	3.82e-97
7	8d8l:a	1506	68	0.0533	0.0418	0.9265	7.11e-20
8	5mrc:aa	1501	975	0.7582	0.5976	0.9200	0.0	5mre:aa, 5mrf:aa
9	5mrc:aa	1501	190	0.1606	0.1266	1.0000	3.82e-97	5mre:aa, 5mrf:aa
10	5mrc:aa	1501	68	0.0533	0.0420	0.9265	7.11e-20	5mre:aa, 5mrf:aa
11	8om3:r	1487	983	0.7295	0.5804	0.8779	0.0	8om4:r
12	8om3:r	1487	190	0.1598	0.1271	0.9947	6.40e-95	8om4:r
13	8om3:r	1487	68	0.0533	0.0424	0.9265	7.11e-20	8om4:r
14	8om2:r	1486	983	0.7295	0.5808	0.8779	0.0
15	8om2:r	1486	190	0.1598	0.1272	0.9947	6.40e-95
16	8om2:r	1486	68	0.0533	0.0424	0.9265	7.11e-20

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