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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
>rna
ucugagaguuugauccuggcucaggauuaacgcuggcggcaugccuaauacaugcaagucgaucgaaaguaguaauacuu
uagaggcgaacgggugaguaacacguauccaaucuaccuuauaaugggggauaacuaguugaaagacuagcuaauaccgc
auaagaacuuugguucgaaucaaaguugaaaggaccugcaaggguucguuauuugaugagggugcgccauaucagcuagu
uggugggguaacggccuaccaaggcaaugacguguagcuaugcugagaaguagaauagccacaaugggacugagacacgg
cccauacuccuacgggaggcagcaguagggaauuuuucacaaugagcgaaagcuugauggagcaaugccgcgugaacgau
gaaggucuuuaagauuguaaaguucuuuuauuugggaagaaugacuuuagcagguaauggcuagaguuugacuguaccau
uuugaauaagugacgacuaacuaugugccagcagucgcgguaauacauaggucgcaagcguuauccggauuuauugggcg
uaaagcaagcgcaggcggauugaaaagucugguguuaaaggcagcugcuuaacaguuguaugcauuggaaacuauuaauc
uagagugugguagggaguuuuggaauuucauguggagcggugaaaugcguagauauaugaaggaacaccaguggcgaagg
cgaaaacuuaggccauuacugacgcuuaggcuugaaaguguggggagcaaauaggauuagauacccuaguaguccacacc
guaaacgauagauacuagcugucggggcgauccccucgguagugaaguuaacacauuaaguaucucgccuggguaguaca
uucgcaagaaugaaacucaaacggaauugacggggacccgcacaagugguggagcauguugcuuaauucgacgguacacg
aaaaaccuuaccuagacuugacauccuuggcaaaguuauggaaacauaaugccgagugacagguggugcaugguugucgu
cagcucgugucgugagauguuggguuaagucccgcaacgagcgcaacccuuaucguuaguuacauugucuagcgagacug
cuaaugcaaauuggaggaaggaagggaugacgucaaaucaucaugccccuuaugucuagggcugcaaacgugcuacaaug
gccaauacaaacagucgccagcuuguaaaagugagcaaaucuguaaaguuggucucaguucggauugagggcugcaauuc
guccucaugaagucggaaucacuaguaaucgcgaaucagcuaugucgcggugaauacguucucgggucuuguacacaccg
cccgucaaacuaugaaagcugguaauauuuaaaaacguguugcuaaccauuaggaagcgcaugucaaggauagcaccggu
gauuggaguuaagucguaacaagguaccccuacgagaacguggggguggauca

The query sequence (length=1493) is searched through a non-redundant set of database sequences rna_nr.fasta.gz clustered at 100% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 7ooc:5 1493 1493 1.0000 1.0000 1.0000 0.0 7p6z:5, 7pah:5, 7pai:5, 7paj:5, 7pak:5, 7pal:5, 7pam:5, 7pan:5, 7pao:5, 7paq:5, 7par:5, 7pas:5, 7ph9:5, 7pha:5, 7phb:5, 7phc:5, 7pi8:5, 7pi9:5, 7pia:5, 7pib:5, 7pic:5, 7pio:5, 7pip:5, 7piq:5, 7pir:5, 7pis:5, 7pit:5
2 7p48:a 1479 1528 0.7870 0.7945 0.7690 0.0 8y38:a, 8y39:a
3 7nhk:a 1517 1543 0.7897 0.7772 0.7641 0.0
4 6o8w:a 1523 1548 0.7910 0.7754 0.7629 0.0 6o8z:a, 6w6p:a
5 5myj:AA 1535 1555 0.7944 0.7726 0.7627 0.0
6 7nhm:a 1531 1558 0.7971 0.7773 0.7638 0.0
7 7p7q:a 1521 1546 0.7897 0.7751 0.7626 0.0 7p7r:a, 7p7s:a, 7p7t:a, 7p7u:a
8 8p2g:a 1534 1558 0.7964 0.7751 0.7632 0.0 8p2h:a
9 8p2f:a 1526 1557 0.7957 0.7785 0.7630 0.0
10 7nhl:a 1538 1563 0.7984 0.7750 0.7626 0.0
11 7nhn:a 1513 1414 0.7287 0.7191 0.7694 0.0
12 8uu5:a 1523 1417 0.7294 0.7150 0.7685 0.0
13 6o8x:a 1528 1553 0.7910 0.7729 0.7605 0.0 6o8y:a, 6o90:a
14 8uu9:a 1515 1415 0.7281 0.7175 0.7682 0.0
15 8uu4:a 1516 1415 0.7281 0.7170 0.7682 0.0 8uu6:a, 8uu7:a, 8uu8:a
16 5nd8:a 1542 1571 0.7991 0.7737 0.7594 0.0
17 7kwg:a 1552 1571 0.7991 0.7687 0.7594 0.0
18 8bh7:a 1541 1571 0.7991 0.7742 0.7594 0.0 5nd9:a
19 8bh6:a 1547 1571 0.7991 0.7712 0.7594 0.0 5li0:a
20 6yef:a 1545 1570 0.7977 0.7709 0.7586 0.0
21 6fxc:Aa 1539 1568 0.7964 0.7726 0.7583 0.0 6fxc:Ba, 5ngm:Aa, 6s0x:a, 6s13:a
22 7asp:X 1447 1297 0.6705 0.6918 0.7718 0.0
23 8byv:a 1533 1431 0.7321 0.7130 0.7638 0.0
24 8buu:a 1538 1307 0.6711 0.6515 0.7666 0.0
25 3j9w:AA 1544 1312 0.6718 0.6496 0.7645 0.0 5njt:A, 7qgu:W, 7qh4:W
26 5tcu:A 1464 1308 0.6711 0.6844 0.7661 0.0
27 7qv2:a 1545 1313 0.6718 0.6492 0.7639 0.0
28 6ha1:a 1533 1308 0.6691 0.6517 0.7638 0.0 6ha8:a, 6htq:a, 7o5b:A, 8qcq:a, 8qpp:A, 7qv1:a, 7qv3:a, 8r55:A
29 7aso:X 1415 1164 0.6001 0.6332 0.7698 4.38e-167
30 7unr:a 1522 1425 0.7133 0.6997 0.7474 4.41e-162 7unu:a, 7unv:a, 7unw:a
31 8fmw:A 1529 1423 0.7120 0.6952 0.7470 4.44e-157
32 6spc:a 1519 1186 0.6021 0.5918 0.7580 1.60e-156
33 8cd1:a 1526 1428 0.7127 0.6972 0.7451 1.60e-156 6spe:a, 6spg:a
34 8rd8:iN 1503 1180 0.5968 0.5928 0.7551 9.68e-149 8rdv:iN, 8rdw:iN
35 7m4u:a 1528 1189 0.6001 0.5864 0.7536 4.50e-147 7m4w:a, 7m4x:a, 7m4y:a, 7m4z:a, 7ryf:a, 7ryg:a, 7ryh:a, 7uvv:a, 7uvw:a, 7uvx:a, 7uvy:a, 7uvz:a, 7uw1:a
36 6v39:sN1 1528 1191 0.6008 0.5870 0.7531 2.09e-145 6v3a:sN1, 6v3b:sN1, 6v3e:sN1
37 8b0x:A 1500 1409 0.6979 0.6947 0.7395 1.26e-142
38 8crx:A 1505 1542 0.7595 0.7535 0.7354 4.53e-142
39 8phj:A 1503 1412 0.6993 0.6946 0.7394 1.63e-141
40 6vwm:1 1508 1180 0.5901 0.5842 0.7466 7.64e-135 6vwn:1
41 6vwl:1 1521 1181 0.5908 0.5799 0.7468 7.64e-135
42 5t7v:A 1419 772 0.4052 0.4264 0.7837 7.64e-135
43 5t7v:A 1419 482 0.2539 0.2671 0.7863 2.30e-80
44 7y7c:A 1520 1182 0.5908 0.5803 0.7462 9.88e-134 7y7d:A, 7y7e:A, 7y7f:A, 7y7g:A, 7y7h:A
45 7ug7:16 1514 1182 0.5908 0.5826 0.7462 9.88e-134
46 8syl:a 1528 1182 0.5908 0.5772 0.7462 9.88e-134
47 8g7p:a 1529 1182 0.5908 0.5768 0.7462 9.88e-134 8g7q:a
48 8ekc:a 1528 1182 0.5908 0.5772 0.7462 9.88e-134 8fzd:a, 8fze:a, 8fzf:a, 8fzg:a, 8fzh:a, 8fzi:a, 8fzj:a, 8g7r:a, 8g7s:a
49 8akn:B 1519 1182 0.5908 0.5806 0.7462 9.88e-134 8am9:B, 9ax7:A, 8aye:A, 8b7y:C, 9cg5:A, 9cg6:A, 9cg7:A, 8eiu:A, 8emm:A, 9fbv:A, 8fto:A, 8g6w:A, 8hsp:A, 8htz:A, 8hu1:A, 8ifb:A, 8ifc:A, 7k00:A, 7oiz:A, 7oj0:A, 7p3k:A, 8pva:A, 8r6c:A, 8r8m:A
50 5zeb:a 1506 1318 0.6557 0.6501 0.7428 3.55e-133 5zep:a, 5zeu:a
51 5uz4:A 1527 1187 0.5934 0.5802 0.7464 3.55e-133
52 8wif:a 1517 1321 0.6571 0.6467 0.7426 1.28e-132
53 8wib:a 1515 1321 0.6571 0.6475 0.7426 1.28e-132 8wid:a
54 8whx:a 1515 1321 0.6571 0.6475 0.7426 1.28e-132 8wi7:a, 8wi9:a
55 8qoa:A 1513 1420 0.7006 0.6913 0.7366 1.28e-132
56 6dzi:h 1511 1320 0.6564 0.6486 0.7424 4.60e-132 6dzk:A, 8fr8:a, 5o5j:A, 5o61:BA, 8v9j:a, 8v9k:a, 8v9l:a
57 6ztj:AA 1533 1187 0.5928 0.5773 0.7456 1.65e-131 6ztl:AA, 6ztm:AA, 6ztn:AA, 6zto:AA, 6ztp:AA, 6zu1:AA
58 7uph:I 4438 1187 0.5928 0.1994 0.7456 1.65e-131
59 4u1u:AA 1538 1187 0.5928 0.5754 0.7456 1.65e-131 4u1v:AA, 4u20:AA, 4u24:AA, 4u25:AA, 4u26:AA, 4u27:AA, 4v6t:AA, 4v7c:AA, 4v7d:BA, 4v9c:CA, 4v9d:AA, 4wf1:AA, 4woi:AA
60 8r3v:A2 1537 1187 0.5928 0.5758 0.7456 1.65e-131 8rcl:A2, 8rcm:A2, 8rcs:A2, 8rct:A2
61 8pkl:A 1535 1187 0.5928 0.5765 0.7456 1.65e-131
62 8p16:2 1536 1187 0.5928 0.5762 0.7456 1.65e-131 8p17:2, 8p18:2, 8qk7:2
63 7n31:16 1533 1187 0.5928 0.5773 0.7456 1.65e-131 7otc:a
64 7n30:16 1526 1187 0.5928 0.5799 0.7456 1.65e-131
65 6lkq:s 1532 1187 0.5928 0.5777 0.7456 1.65e-131 7qg8:0, 7qgn:0, 7tos:16S, 4v85:AA, 4v89:AA
66 7kgb:a 1519 1315 0.6517 0.6406 0.7399 1.65e-131 7msc:a, 7msh:a, 7msm:a, 7msz:a, 7mt2:a, 7mt3:a, 7mt7:a, 7sfr:a, 5v93:a
67 7jss:3 1539 1187 0.5928 0.5750 0.7456 1.65e-131 7jsw:3, 7jsz:3, 7jt1:3, 7jt2:3, 7jt3:3
68 3j9z:SA 1542 1187 0.5928 0.5739 0.7456 1.65e-131 3ja1:SA, 7n1p:16, 8peg:A, 8r3v:A1, 8rcl:A1, 8rcm:A1, 8rcs:A1, 8rct:A1, 4v6k:BA, 4v6l:AA, 4v6m:AA, 4v6n:BA, 4v6o:AA, 4v6p:AA, 4v6q:AA, 4v6r:AA, 4v6s:BA, 4v6v:AA
69 6i7v:AA 1533 1187 0.5928 0.5773 0.7456 1.65e-131 6i7v:BA, 5iqr:2, 5it8:BA, 5j5b:BA, 5j91:BA, 3jcd:a, 3jce:a, 4v6c:AA, 4v6d:AA, 4v6e:AA, 4v7b:AA, 4v7s:AA, 4v7t:AA, 4v7u:AA, 4v7v:AA, 4v9o:BA, 4v9o:DA, 4v9o:FA, 4v9o:HA, 4v9p:BA, 4v9p:DA, 4v9p:FA, 4v9p:HA, 4www:QA, 4ybb:BA, 2ykr:A
70 6hrm:1 4450 1187 0.5928 0.1989 0.7456 1.65e-131
71 6h4n:a 1534 1187 0.5928 0.5769 0.7456 1.65e-131
72 6by1:BA 1541 1187 0.5928 0.5743 0.7456 1.65e-131
73 7b5k:a 1533 1187 0.5928 0.5773 0.7456 1.65e-131
74 5afi:a 1539 1187 0.5928 0.5750 0.7456 1.65e-131 6awd:A, 9ax8:a, 6bu8:A, 7cpj:a, 7d6z:f, 7d80:B, 6dnc:A, 6enf:a, 6enj:a, 6enu:a, 8g2u:v, 8g31:v, 8g38:v, 6gwt:a, 6gxm:a, 6gxn:a, 6gxo:a, 6gxp:a, 6h58:a, 6h58:aa, 3j9y:a, 3jcj:g, 3jcn:a, 5jte:AA, 5ju8:AA, 7k50:3, 7k51:3, 7k52:3, 7k53:3, 7k54:3, 7k55:3, 5kcr:1a, 5kcs:1a, 5kps:27, 5kpv:26, 5kpw:26, 5kpx:26, 5l3p:a, 7lv0:3, 5lza:a, 5lzb:a, 5lzc:a, 5lzd:a, 5lze:a, 5lzf:a, 5mgp:a, 5np6:D, 5nwy:0, 5o2r:a, 6o7k:g, 6o9k:a, 6ofx:3, 6og7:3, 6ogf:3, 6ogg:3, 6ogi:3, 8qbt:i, 7qgh:0, 7qgr:0, 7ss9:3, 7ssd:3, 7ssl:3, 7ssn:3, 7sso:3, 7ssw:3, 7st2:3, 7st6:3, 7st7:3, 8t5d:v, 8t5h:v, 4u1u:CA, 4u1v:CA, 4u20:CA, 4u24:CA, 4u25:CA, 4u26:CA, 4u27:CA, 5u9f:A, 5u9g:A, 5uyk:A, 5uyl:A, 5uym:A, 5uyn:A, 5uyp:A, 5uyq:A, 4v9c:AA, 4v9d:BA, 8vs9:16S, 8vsa:16S, 6wd0:3, 6wd1:3, 6wd2:3, 6wd3:3, 6wd4:3, 6wd5:3, 6wd6:3, 6wd7:3, 6wd8:3, 6wd9:3, 6wda:3, 6wdb:3, 6wdc:3, 6wdd:3, 6wde:3, 6wdf:3, 6wdg:3, 6wdh:3, 6wdi:3, 6wdj:3, 6wdk:3, 6wdl:3, 6wdm:3, 5we6:a, 4wf1:CA, 6wnv:3, 6wnw:3, 4woi:DA, 6xe0:W, 6y69:a, 6ysr:a
75 7acr:2 1534 1187 0.5928 0.5769 0.7456 1.65e-131
76 7acj:2 1534 1187 0.5928 0.5769 0.7456 1.65e-131 8bf7:2, 8bge:2, 8bgh:2, 8bh4:2, 8bhj:2, 8bhl:2, 8bhn:2, 8bhp:2, 8bil:2, 8bim:2, 7boe:A, 6c4i:a, 8fiz:AA, 5h5u:h, 5it8:AA, 5j5b:AA, 5j91:AA, 7m5d:2, 5mdv:2, 5mdw:2, 5mdy:2, 5mdz:2, 5me0:A, 5me1:A, 7n2c:16, 7n2u:16, 7n2v:16, 7nar:A, 5no2:A, 5no3:A, 5no4:A, 7nwt:2, 7nww:2, 7o19:AA, 7o1a:AA, 7o1c:AA, 7oif:2, 7oig:2, 7oii:2, 6om6:2, 6ore:2, 6orl:2, 6osk:2, 6osq:2, 6ost:2, 6ot3:2, 7ot5:2, 6ouo:2, 7q4k:AA, 6q97:2, 6q98:2, 6q9a:2, 7sa4:2, 6tbv:16S1, 6tc3:16S1, 6w6k:A, 4ybb:AA, 7zta:16S1
77 7ac7:2 1540 1187 0.5928 0.5747 0.7456 1.65e-131 6by1:AA, 7nso:a, 7nsp:a, 7nsq:a, 7pjs:a, 7pjt:a, 7pju:a, 7pjv:a, 7pjw:a, 7pjx:a, 7pjy:a, 7pjz:a, 7s1g:C, 7s1h:C, 7s1i:C, 7s1j:C, 7s1k:C, 6szs:a, 5wdt:a, 5we4:a, 5wf0:a, 5wfk:a, 5wfs:a, 6yss:a, 6yst:a, 6ysu:a
78 7abz:2 1540 1187 0.5928 0.5747 0.7456 1.65e-131
79 4a2i:A 1530 1187 0.5928 0.5784 0.7456 1.65e-131 3jbu:A, 3jbv:A, 5my1:A, 6o9j:a, 7oe1:A, 4v4h:AA, 4v4h:CA, 4v4q:AA, 4v4q:CA, 4v50:AA, 4v50:CA, 4v52:AA, 4v52:CA, 4v53:AA, 4v53:CA, 4v54:AA, 4v54:CA, 4v55:AA, 4v55:CA, 4v56:AA, 4v56:CA, 4v57:AA, 4v57:CA, 4v5b:BA, 4v5b:DA, 4v5h:AA, 4v5y:AA, 4v5y:CA, 4v64:AA, 4v64:CA, 4v65:A1, 4v66:A1, 4v69:AA, 4v6c:CA, 4v6d:CA, 4v6e:CA, 4v6y:AA, 4v6z:AA, 4v70:AA, 4v71:AA, 4v72:AA, 4v73:AA, 4v74:AA, 4v75:AA, 4v76:AA, 4v77:AA, 4v78:AA, 4v79:AA, 4v7a:AA, 4v7i:BA, 4v7s:CA, 4v7t:CA, 4v7u:CA, 4v7v:CA, 4www:XA
80 8g34:v 1539 1179 0.5887 0.5712 0.7455 2.14e-130
81 5u4i:a 1533 1187 0.5921 0.5766 0.7447 7.69e-130
82 8jsg:g 1539 1187 0.5921 0.5744 0.7447 7.69e-130
83 5j88:BA 1533 1187 0.5921 0.5766 0.7447 7.69e-130
84 5j88:AA 1534 1187 0.5921 0.5763 0.7447 7.69e-130
85 5j7l:BA 1533 1187 0.5921 0.5766 0.7447 7.69e-130 5j8a:BA, 5jc9:BA
86 5j7l:AA 1534 1187 0.5921 0.5763 0.7447 7.69e-130 5j8a:AA, 5jc9:AA
87 4v4v:AA 1488 1178 0.5874 0.5894 0.7445 3.58e-128 4v4w:AA
88 8ghu:a 1532 1187 0.5914 0.5764 0.7439 3.58e-128
89 6awb:A 1443 1173 0.5847 0.6050 0.7442 4.63e-127 6awc:A
90 7nax:A 1526 1172 0.5841 0.5714 0.7440 1.67e-126
91 7nau:A 1522 1172 0.5841 0.5729 0.7440 1.67e-126
92 8eyq:A 1525 1172 0.5841 0.5718 0.7440 1.67e-126
93 7boh:A 1527 1172 0.5841 0.5711 0.7440 1.67e-126
94 8a3l:A 1539 1185 0.5894 0.5718 0.7426 1.67e-126 7nbu:A
95 7oe0:A 1510 1173 0.5841 0.5775 0.7434 2.15e-125
96 7nav:A 1510 1173 0.5841 0.5775 0.7434 2.15e-125
97 8q4f:A 1512 1182 0.5874 0.5800 0.7420 3.61e-123
98 6vz2:D 1523 1175 0.5841 0.5726 0.7421 4.66e-122 6vz3:D, 6vz5:D, 6xza:A1, 6xzb:A1
99 6vyy:D 1522 1175 0.5841 0.5729 0.7421 4.66e-122 6vyz:D
100 8upo:D 1524 1175 0.5841 0.5722 0.7421 4.66e-122 8upr:D, 8uql:D, 8uqm:D, 8uqp:D, 8ur0:D, 8urh:D, 8uri:D, 8urx:D, 8ury:D, 6vu3:D, 6vyq:D, 6vyr:D, 6vys:D, 6vyt:D, 6vyu:D, 6vyw:D, 6vz7:D, 6vzj:D, 6x6t:D, 6x7f:D, 6x7k:D, 6x9q:D, 6xdq:D, 6xdr:D, 6xgf:D, 6xii:D, 6xij:D
101 7nat:A 1430 1164 0.5787 0.6042 0.7423 4.66e-122
102 8k3o:A 1426 1166 0.5794 0.6066 0.7419 1.68e-121 8k4e:A
103 7bgd:a 1096 956 0.4863 0.6624 0.7594 1.68e-121
104 6wub:a 1121 941 0.4769 0.6351 0.7566 6.03e-121
105 6wub:a 1121 46 0.0308 0.0410 1.0000 5.41e-17
106 6w7m:A 1512 1159 0.5760 0.5688 0.7420 6.03e-121
107 6w77:A 1519 1159 0.5760 0.5662 0.7420 6.03e-121
108 4adv:A 1410 1154 0.5733 0.6071 0.7418 7.80e-120
109 5x8p:a 1480 1049 0.5231 0.5277 0.7445 1.02e-113 5x8r:a
110 8eyt:A 1415 1163 0.5754 0.6071 0.7386 1.02e-113
111 4v61:AA 1478 1052 0.5238 0.5291 0.7433 1.70e-111
112 5mmj:a 1484 1052 0.5238 0.5270 0.7433 1.70e-111 5mmm:a
113 6eri:BA 1481 1050 0.5224 0.5267 0.7429 2.20e-110
114 5hcp:2a 1483 1156 0.5660 0.5698 0.7310 2.87e-104 5hcq:2a, 5hcr:2a, 5hd1:2a, 4z8c:2a
115 5hcp:1a 1477 1156 0.5653 0.5714 0.7301 4.80e-102 5hcq:1a, 5hcr:1a, 5hd1:1a, 4z8c:1a
116 6gsj:1G 1490 1159 0.5666 0.5678 0.7299 4.80e-102 6gsk:1G
117 4v7m:AA 1495 1163 0.5687 0.5679 0.7300 1.73e-101
118 5el5:1G 1496 1160 0.5666 0.5655 0.7293 2.23e-100
119 4v4g:AA 1526 1174 0.5720 0.5596 0.7274 1.34e-97 4v4g:CA, 4v4g:EA, 4v4g:GA, 4v4g:IA
120 4v4a:AA 1533 1174 0.5720 0.5571 0.7274 1.34e-97
121 4v49:AA 1527 1174 0.5720 0.5593 0.7274 1.34e-97
122 4v95:CA 1461 1155 0.5633 0.5756 0.7281 2.25e-95
123 4v95:AA 1466 1155 0.5633 0.5737 0.7281 2.25e-95
124 6dti:A 1507 1168 0.5687 0.5634 0.7269 2.91e-94 6mkn:A, 6mpi:A, 1xmo:A, 1xmq:A, 1xnq:A, 1xnr:A
125 4v4b:AA 1466 889 0.4407 0.4488 0.7402 3.76e-93
126 5vpp:XA 1515 1172 0.5693 0.5611 0.7253 6.29e-91
127 5vpp:QA 1511 1172 0.5693 0.5625 0.7253 6.29e-91
128 4v9j:AA 1511 1172 0.5693 0.5625 0.7253 6.29e-91 4v9j:CA, 4v9k:AA, 4v9k:CA, 4v9l:AA, 4v9l:CA, 4v9m:AA, 4v9m:CA, 4w29:AA, 4w29:CA
129 5v8i:2a 1504 1172 0.5693 0.5652 0.7253 6.29e-91
130 5v8i:1a 1500 1172 0.5693 0.5667 0.7253 6.29e-91
131 4v83:AA 1506 1172 0.5693 0.5644 0.7253 6.29e-91 4v83:CA, 4v84:AA, 4v84:CA
132 4v4j:y 1514 1172 0.5693 0.5614 0.7253 6.29e-91
133 4v4i:y 1502 1172 0.5693 0.5659 0.7253 6.29e-91
134 6n1d:A16S 1517 1172 0.5693 0.5603 0.7253 6.29e-91 6n1d:B16S
135 4kvb:A 1514 1172 0.5693 0.5614 0.7253 6.29e-91
136 5d8b:UC 1504 1172 0.5693 0.5652 0.7253 6.29e-91 5d8b:YC, 4v63:AA, 4v63:CA, 4v67:AA, 4v67:CA, 4v7p:AA, 4v7p:DA, 4v9n:AA, 4v9n:CA, 4v9q:BA, 4v9q:DA, 4xej:A16S, 4xej:B16S
137 6b4v:A 1507 1172 0.5693 0.5640 0.7253 6.29e-91 6b4v:EB, 6boh:A, 6boh:FB, 6bok:A, 6bok:DB, 5j4d:A, 5j4d:FB
138 5zlu:G 1514 1171 0.5687 0.5608 0.7250 2.26e-90
139 4v6a:AA 1495 1172 0.5693 0.5686 0.7253 2.26e-90
140 2zm6:A 1506 1172 0.5687 0.5637 0.7244 2.93e-89
141 4yhh:A 1507 1172 0.5687 0.5634 0.7244 2.93e-89
142 4wzd:13 1499 1172 0.5687 0.5664 0.7244 2.93e-89
143 4wu1:13 1501 1172 0.5687 0.5656 0.7244 2.93e-89
144 4wsm:13 1507 1172 0.5687 0.5634 0.7244 2.93e-89
145 4wra:1G 1504 1172 0.5687 0.5645 0.7244 2.93e-89
146 4wra:13 1505 1172 0.5687 0.5641 0.7244 2.93e-89
147 4w4g:XA 1508 1172 0.5687 0.5630 0.7244 2.93e-89 4ypb:XA, 4yzv:XA, 4zsn:XA
148 4w4g:QA 1511 1172 0.5687 0.5619 0.7244 2.93e-89 4ypb:QA, 4yzv:QA, 4zsn:QA
149 4w2i:AA 1496 1172 0.5687 0.5675 0.7244 2.93e-89
150 4w2h:AA 1497 1172 0.5687 0.5671 0.7244 2.93e-89
151 4w2e:a 1496 1172 0.5687 0.5675 0.7244 2.93e-89
152 1vvj:XA 1501 1172 0.5687 0.5656 0.7244 2.93e-89
153 4v97:AA 1504 1173 0.5693 0.5652 0.7246 2.93e-89 4v97:CA
154 4v8q:BA 1504 1172 0.5687 0.5645 0.7244 2.93e-89
155 4v8i:CA 1491 1172 0.5687 0.5694 0.7244 2.93e-89
156 4v8h:CA 1497 1172 0.5687 0.5671 0.7244 2.93e-89 4wqr:1G, 4wro:13, 4wro:1G, 4wt1:1G, 4wzo:13, 4wzo:1G
157 4v8h:AA 1501 1172 0.5687 0.5656 0.7244 2.93e-89
158 4v8g:CA 1501 1172 0.5687 0.5656 0.7244 2.93e-89
159 4v8g:AA 1505 1172 0.5687 0.5641 0.7244 2.93e-89
160 4v8d:AA 1502 1172 0.5687 0.5652 0.7244 2.93e-89 4v8d:CA, 4v8e:BA, 4v8e:DA, 4v8f:BA, 4v8f:CA
161 4v8a:CA 1498 1172 0.5687 0.5668 0.7244 2.93e-89 4v8a:DA
162 4v7m:CA 1493 1172 0.5687 0.5687 0.7244 2.93e-89
163 4v7l:AA 1495 1172 0.5687 0.5679 0.7244 2.93e-89 4v7l:CA
164 4v6g:CA 1515 1172 0.5687 0.5604 0.7244 2.93e-89
165 4v6g:AA 1517 1172 0.5687 0.5597 0.7244 2.93e-89
166 4v6f:BA 1516 1172 0.5687 0.5600 0.7244 2.93e-89
167 4v5p:AA 1510 1172 0.5687 0.5623 0.7244 2.93e-89 4v5p:CA, 4v5r:AA, 4v5r:CA
168 4v5k:AA 1508 1172 0.5687 0.5630 0.7244 2.93e-89 4v5k:CA
169 7v2l:A 1507 1172 0.5687 0.5634 0.7244 2.93e-89
170 6qnr:1G 1513 1172 0.5687 0.5611 0.7244 2.93e-89 4wsm:1G
171 6qnr:13 1516 1172 0.5687 0.5600 0.7244 2.93e-89
172 6qnq:1G 1510 1172 0.5687 0.5623 0.7244 2.93e-89
173 6qnq:13 1506 1172 0.5687 0.5637 0.7244 2.93e-89
174 6otr:XA 1507 1172 0.5687 0.5634 0.7244 2.93e-89 6oxa:XA, 6oxi:XA
175 6otr:QA 1510 1172 0.5687 0.5623 0.7244 2.93e-89 6oxa:QA, 6oxi:QA
176 6nsh:QA 1511 1172 0.5687 0.5619 0.7244 2.93e-89 6nwy:QA, 6osi:QA
177 5ndj:1G 1513 1172 0.5687 0.5611 0.7244 2.93e-89 5ndk:1G, 5uq7:a, 5uq8:a
178 5ndj:13 1508 1172 0.5687 0.5630 0.7244 2.93e-89 5ndk:13
179 6mpf:A 1508 1172 0.5687 0.5630 0.7244 2.93e-89
180 5lmn:A 1514 1172 0.5687 0.5608 0.7244 2.93e-89 5lmo:A, 5lmp:A, 5lmq:A, 5lms:A
181 4lf6:A 1510 1172 0.5687 0.5623 0.7244 2.93e-89
182 4l47:XA 1500 1172 0.5687 0.5660 0.7244 2.93e-89 4l71:XA, 4lel:XA, 4lfz:XA, 4lnt:XA, 4lsk:XA, 4lt8:XA, 6nta:XA, 6nuo:XA, 6o3m:XA, 6of6:XA, 6oj2:XA, 6ope:XA, 4p6f:XA, 4p70:XA, 4tua:XA, 4tub:XA, 4tuc:XA, 4tud:XA, 4tue:XA, 5vpo:XA
183 4khp:A 1506 1172 0.5687 0.5637 0.7244 2.93e-89
184 4jya:A 1516 1172 0.5687 0.5600 0.7244 2.93e-89
185 4jv5:A 1511 1172 0.5687 0.5619 0.7244 2.93e-89 4k0k:A
186 4ji5:A 1514 1172 0.5687 0.5608 0.7244 2.93e-89 4ji6:A, 4ji7:A, 4ji8:A
187 4ji4:A 1512 1172 0.5687 0.5615 0.7244 2.93e-89
188 4ji3:A 1511 1172 0.5687 0.5619 0.7244 2.93e-89
189 5j8b:a 1498 1172 0.5687 0.5668 0.7244 2.93e-89 4wq1:13, 4wq1:1G, 4wqr:13, 4wr6:13, 4wr6:1G, 4wsd:13, 4wsd:1G, 4wt1:13
190 5iwa:A 1509 1172 0.5687 0.5626 0.7244 2.93e-89
191 5ib7:1G 1508 1172 0.5687 0.5630 0.7244 2.93e-89
192 5ib7:13 1499 1172 0.5687 0.5664 0.7244 2.93e-89
193 1i94:A 1514 1172 0.5687 0.5608 0.7244 2.93e-89 1i95:A, 1i96:A, 1i97:A
194 2hhh:A 1505 1172 0.5687 0.5641 0.7244 2.93e-89
195 5hau:2a 1501 1172 0.5687 0.5656 0.7244 2.93e-89 4wqf:DA, 4wqu:DA, 4wqy:DA
196 6gzq:A2 1506 1172 0.5687 0.5637 0.7244 2.93e-89 6gzx:A3, 6gzx:A4, 6gzz:A3, 6gzz:A4, 1ibk:A, 4v87:BA, 4v87:CA, 4v8b:AA, 4v8b:CA, 4v8c:CA, 4v8c:DA, 4v9a:AA, 4v9a:CA, 4v9b:AA, 4v9b:CA
197 6gsl:1G 1509 1172 0.5687 0.5626 0.7244 2.93e-89 5ib8:1G
198 6gsl:13 1512 1172 0.5687 0.5615 0.7244 2.93e-89
199 6gsj:13 1500 1172 0.5687 0.5660 0.7244 2.93e-89 6gsk:13, 5ib8:13
200 4gkj:A 1513 1172 0.5687 0.5611 0.7244 2.93e-89 4gkk:A, 1j5e:A, 4lf4:A, 4lf5:A, 1n32:A, 1n33:A, 1n34:A, 1n36:A, 6ny6:A, 3oto:A, 3t1h:A, 3t1y:A, 2uxb:A, 2uxc:A, 2vqe:A, 2vqf:A, 4yy3:A
201 8fom:XA 1511 1172 0.5687 0.5619 0.7244 2.93e-89 8fon:XA, 6nsh:XA
202 8fom:QA 1500 1172 0.5687 0.5660 0.7244 2.93e-89 8fon:QA, 4l47:QA, 4l71:QA, 4lel:QA, 4lfz:QA, 4lnt:QA, 4lsk:QA, 4lt8:QA, 6nta:QA, 6nuo:QA, 6o3m:QA, 6of6:QA, 6oj2:QA, 6ope:QA, 4p6f:QA, 4p70:QA, 4tua:QA, 4tub:QA, 4tuc:QA, 4tud:QA, 4tue:QA, 5vpo:QA, 1vvj:QA
203 2f4v:A 1507 1172 0.5687 0.5634 0.7244 2.93e-89 1fjg:A, 1hnw:A, 1hnx:A, 1hnz:A, 1hr0:A, 1ibl:A, 1ibm:A, 5ot7:1, 4ox9:A, 4v90:AA
204 5e81:1G 1506 1172 0.5687 0.5637 0.7244 2.93e-89 5ibb:1G
205 5e7k:1G 1507 1172 0.5687 0.5634 0.7244 2.93e-89 5el4:1G, 5el6:1G
206 5e7k:13 1496 1172 0.5687 0.5675 0.7244 2.93e-89 5e81:13, 5el4:13, 5el6:13, 5el7:13, 5ibb:13
207 2e5l:A 1517 1172 0.5687 0.5597 0.7244 2.93e-89
208 4dv0:A 1512 1172 0.5687 0.5615 0.7244 2.93e-89 4dv1:A
209 4dr7:A 1513 1172 0.5687 0.5611 0.7244 2.93e-89
210 4dr6:A 1514 1172 0.5687 0.5608 0.7244 2.93e-89
211 6cfk:2a 1504 1172 0.5687 0.5645 0.7244 2.93e-89 6cfl:2a, 5czp:XA, 6czr:2a, 5dfe:XA, 5dox:2a, 5f8k:2a, 8fc1:2a, 8fc2:2a, 8fc3:2a, 8fc4:2a, 8fc5:2a, 8fc6:2a, 5fdu:2a, 5fdv:2a, 5j30:XA, 5j3c:XA, 7md7:2a, 6ndk:XA, 6ord:XA, 7rqa:2a, 7rqb:2a, 7rqc:2a, 7rqd:2a, 7rqe:2a, 8t8b:2a, 8t8c:2a, 8vtw:2a, 8vty:2a, 4wu1:1G, 6xhx:2a, 4y4o:2a, 4zer:2a
212 6car:A 1511 1172 0.5687 0.5619 0.7244 2.93e-89
213 6cap:A 1512 1172 0.5687 0.5615 0.7244 2.93e-89 6caq:A, 6cas:A, 4duy:A, 4duz:A, 7dug:A, 7duh:A, 7dui:A, 7duj:A, 7duk:A, 7dul:A
214 6c5l:AA 1504 1172 0.5687 0.5645 0.7244 2.93e-89 6c5l:CA, 7lh5:AA, 7lh5:CA, 6q95:2, 4v51:AA, 4v51:CA, 4v5a:AA, 4v5a:CA, 4v5c:AA, 4v5c:CA, 4v5d:AA, 4v5d:CA, 4v5e:AA, 4v5e:CA, 4v5f:AA, 4v5f:CA, 4v5g:AA, 4v5g:CA, 4v5j:AA, 4v5j:CA, 4v5l:AA, 4v5m:AA, 4v5n:AA, 4v5q:AA, 4v5q:CA, 4v5s:AA, 4v5s:CA, 4v68:AA, 4v6a:CA, 4v7j:Aa, 4v7j:Ba, 4v7k:Aa, 4v7k:Ba, 4v7w:AA, 4v7w:CA, 4v7x:AA, 4v7x:CA, 4v7y:AA, 4v7y:CA, 4v7z:AA, 4v7z:CA, 4v8n:AA, 4v8n:CA, 4v8o:AA, 4v8u:AA, 4v8u:CA, 4v8x:AA, 4v8x:CA, 4v9i:AA, 4v9i:CA, 4wt8:Ab, 4wt8:Bb
215 6buw:XA 1500 1173 0.5693 0.5667 0.7246 2.93e-89 6bz7:XA
216 6buw:QA 1500 1173 0.5693 0.5667 0.7246 2.93e-89 6bz7:QA
217 4b3m:A 1512 1172 0.5687 0.5615 0.7244 2.93e-89 4b3r:A, 4b3t:A, 5br8:A, 6cao:A, 4dr1:A, 4dr2:A, 4dr3:A, 4dr4:A, 4dr5:A, 4ji0:A, 4ji1:A, 4ji2:A, 4lf9:A, 4lfa:A, 4lfb:A, 4lfc:A, 4nxm:A, 4nxn:A, 2uu9:A, 2uua:A, 2uub:A, 2uuc:A, 5wnp:A, 5wnq:A, 5wnr:A, 5wns:A, 5wnt:A, 5wnu:A, 5wnv:A, 4x62:A, 4x64:A, 4x65:A, 4x66:A
218 9b00:2a 1503 1172 0.5687 0.5649 0.7244 2.93e-89 6cae:2a, 6cfj:2a, 8cvj:2a, 8cvk:2a, 8cvl:2a, 5doy:2a, 8ekb:2a, 8ev6:2a, 8ev7:2a, 8g29:2a, 8g2a:2a, 8g2b:2a, 8g2c:2a, 8g2d:2a, 5j4b:2a, 5j4c:2a, 7jql:2a, 7jqm:2a, 6n9e:2a, 6n9f:2a, 6nd5:2a, 6nd6:2a, 6o97:2a, 6of1:2a, 7rq8:2a, 7rq9:2a, 7u2h:2a, 7u2i:2a, 7u2j:2a, 6ucq:2a, 8ud6:2a, 8ud7:2a, 8ud8:2a, 6uo1:2a, 8uvr:2a, 8uvs:2a, 4v9r:CA, 4v9s:CA, 5vp2:2a, 8vtu:2a, 8vtv:2a, 8vtx:2a, 1vy4:CA, 1vy5:CA, 1vy6:CA, 1vy7:CA, 4w2f:CA, 4w2g:CA, 4w2h:CA, 4w2i:CA, 5w4k:2a, 5wis:2a, 5wit:2a, 4wpo:DA, 4wzd:1G, 6xhv:2a, 6xhw:2a, 6xhy:2a, 6xqd:2a, 6xqe:2a, 4y4p:2a, 4z3s:2a
219 9b00:1a 1500 1172 0.5687 0.5660 0.7244 2.93e-89 6cae:1a, 6cfj:1a, 6cfk:1a, 6cfl:1a, 8cvj:1a, 8cvk:1a, 8cvl:1a, 5czp:QA, 6czr:1a, 5dfe:QA, 5dox:1a, 5doy:1a, 8ekb:1a, 8ev6:1a, 8ev7:1a, 5f8k:1a, 8fc1:1a, 8fc2:1a, 8fc3:1a, 8fc4:1a, 8fc5:1a, 8fc6:1a, 5fdu:1a, 5fdv:1a, 6fkr:1a, 6fkr:2a, 8g29:1a, 8g2a:1a, 8g2b:1a, 8g2c:1a, 8g2d:1a, 5j30:QA, 5j3c:QA, 5j4b:1a, 5j4c:1a, 7jql:1a, 7jqm:1a, 7md7:1a, 6n9e:1a, 6n9f:1a, 6nd5:1a, 6nd6:1a, 6ndk:QA, 6o97:1a, 6of1:1a, 6ord:QA, 7rq8:1a, 7rq9:1a, 7rqa:1a, 7rqb:1a, 7rqc:1a, 7rqd:1a, 7rqe:1a, 8t8b:1a, 8t8c:1a, 7u2h:1a, 7u2i:1a, 7u2j:1a, 8ud6:1a, 8ud7:1a, 8ud8:1a, 6uo1:1a, 8uvr:1a, 8uvs:1a, 5vp2:1a, 8vtu:1a, 8vtv:1a, 8vtw:1a, 8vtx:1a, 8vty:1a, 5w4k:1a, 5wis:1a, 5wit:1a, 6xhv:1a, 6xhw:1a, 6xhx:1a, 6xhy:1a, 6xqd:1a, 6xqe:1a, 4y4o:1a, 4y4p:1a, 4z3s:1a, 4zer:1a
220 7azs:16SB 1507 1172 0.5687 0.5634 0.7244 2.93e-89
221 7azs:16SA 1511 1172 0.5687 0.5619 0.7244 2.93e-89
222 7azo:16SB 1508 1172 0.5687 0.5630 0.7244 2.93e-89
223 7azo:16SA 1512 1172 0.5687 0.5615 0.7244 2.93e-89
224 4aqy:A 1510 1172 0.5687 0.5623 0.7244 2.93e-89 4b3s:A, 4lf7:A, 4lf8:A
225 5a9z:BA 1515 1172 0.5687 0.5604 0.7244 2.93e-89 5aa0:BA, 5imq:A, 5imr:A, 5lmr:A, 5lmt:A, 5lmu:A, 5lmv:A, 6nwy:XA, 6osi:XA, 4v4p:BA, 4v4r:AA, 4v4s:AA, 4v4t:AA, 4v4x:AA, 4v4y:AA, 4v4z:AA, 4v6f:CA
226 5el7:1G 1506 1172 0.5687 0.5637 0.7244 1.05e-88
227 4v8j:CA 1503 1172 0.5680 0.5642 0.7235 1.36e-87
228 4v8j:AA 1504 1172 0.5680 0.5638 0.7235 1.36e-87
229 4dv6:A 1512 1172 0.5680 0.5608 0.7235 1.36e-87 4dv7:A
230 4dv4:A 1512 1172 0.5680 0.5608 0.7235 1.36e-87 4dv5:A
231 4dv2:A 1512 1172 0.5680 0.5608 0.7235 1.36e-87 4dv3:A
232 6bz8:QA 1500 1172 0.5680 0.5653 0.7235 1.36e-87
233 6bz6:XA 1500 1172 0.5680 0.5653 0.7235 1.36e-87 6bz8:XA
234 1vy4:AA 1497 1172 0.5680 0.5665 0.7235 4.90e-87 4wpo:BA
235 4v9r:AA 1498 1172 0.5680 0.5661 0.7235 4.90e-87 4v9s:AA, 1vy5:AA, 1vy6:AA, 1vy7:AA, 4w2g:AA
236 4v9h:AA 1514 1172 0.5680 0.5601 0.7235 4.90e-87
237 6ucq:1a 1499 1172 0.5680 0.5657 0.7235 4.90e-87
238 5hau:1a 1495 1172 0.5680 0.5672 0.7235 4.90e-87 4wqf:BA, 4wqu:BA, 4wqy:BA
239 5el5:13 1493 1172 0.5680 0.5680 0.7235 4.90e-87
240 4w2f:AA 1497 1172 0.5673 0.5658 0.7227 2.28e-85
241 6bz6:QA 1498 1172 0.5666 0.5648 0.7218 1.06e-83
242 2uxd:A 1484 905 0.4447 0.4474 0.7337 6.38e-81
243 4v8i:AA 1493 904 0.4434 0.4434 0.7323 2.97e-79
244 8cdu:A 1333 537 0.2793 0.3128 0.7765 1.38e-77 8cec:A, 8ced:A, 8cee:A
245 8cdu:A 1333 498 0.2572 0.2881 0.7711 2.31e-75 8cec:A, 8ced:A, 8cee:A
246 7v2o:A 1487 1161 0.5586 0.5609 0.7183 2.31e-75
247 8cdv:A 1247 498 0.2572 0.3079 0.7711 2.31e-75
248 8cdv:A 1247 207 0.1052 0.1259 0.7585 6.95e-21
249 7v2p:A 1394 1160 0.5579 0.5976 0.7181 8.32e-75
250 7v2m:A 1486 1161 0.5573 0.5599 0.7166 1.80e-71
251 7v2n:A 1394 1160 0.5566 0.5961 0.7164 6.48e-71
252 6w7n:A 1372 526 0.2699 0.2937 0.7662 1.08e-68
253 7v2q:A 1391 1160 0.5559 0.5967 0.7155 1.08e-68
254 6nqb:A 1341 521 0.2672 0.2975 0.7658 1.40e-67
255 8cvo:A 471 353 0.1902 0.6030 0.8045 5.04e-67
256 8ca7:A 502 487 0.2512 0.7470 0.7700 6.52e-66
257 8cf1:A 485 488 0.2512 0.7732 0.7684 8.44e-65
258 7bge:a 465 470 0.2425 0.7785 0.7702 1.83e-61
259 1fka:A 1479 757 0.3704 0.3739 0.7305 1.10e-58
260 6ys5:3 453 461 0.2364 0.7792 0.7657 1.42e-57 6ytf:3
261 8caz:A 460 461 0.2344 0.7609 0.7592 3.98e-53 8cf8:A, 8cgi:A
262 7af3:1 456 459 0.2331 0.7632 0.7582 5.15e-52 7af5:1, 7af8:1, 7afa:1, 7afd:1, 7afh:1, 7afk:1, 7afn:1
263 6wua:a 402 236 0.1286 0.4776 0.8136 5.19e-47
264 6spf:a 1390 346 0.1748 0.1878 0.7543 6.80e-36
265 8cai:A 1114 57 0.0362 0.0485 0.9474 4.18e-18
266 8cgj:A 1130 52 0.0335 0.0442 0.9615 5.41e-17

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218