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BioLiP
>rna
ucaggcgauguuu

The query sequence (length=13) is searched through a non-redundant set of database sequences rna_nr.fasta.gz clustered at 100% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		Alignment
score 		Homologs
to hit
1 6ri9:R 13 13 1.0000 1.0000 1.0000 26 6rin:R, 6rip:R
2 3hjw:E 13 13 0.4615 0.4615 0.4615 -9 3lwo:E, 3lwp:E, 3lwq:E
3 3j0l:G 13 13 0.4615 0.4615 0.4615 -9 3j0o:G, 3j0p:G, 3j0q:G
4 4ang:S 13 13 0.4615 0.4615 0.4615 -9
5 6evj:R 13 13 0.4615 0.4615 0.4615 -9 6evj:S, 6evk:R, 6fhh:R, 6fhi:R, 5m3h:R, 4wsb:R
6 6uq1:R 11 11 0.6154 0.7273 0.7273 -12
7 2c50:S 13 13 0.3846 0.3846 0.3846 -14
8 2iz8:S 13 13 0.3846 0.3846 0.3846 -14
9 4nh3:B 13 13 0.3846 0.3846 0.3846 -14
10 5aj3:X 13 13 0.3846 0.3846 0.3846 -14 5aj4:AX, 2f55:D, 5i8q:F, 7uml:R
11 6cae:1v 13 13 0.3846 0.3846 0.3846 -14 6o97:2v
12 6fq3:B 13 13 0.3846 0.3846 0.3846 -14
13 6gpg:B 13 13 0.3846 0.3846 0.3846 -14
14 6mu5:T 13 13 0.3846 0.3846 0.3846 -14
15 6xa1:k 13 13 0.3846 0.3846 0.3846 -14
16 7a9x:B 13 13 0.3846 0.3846 0.3846 -14
17 8jdj:A 14 13 0.6154 0.5714 0.6154 -14
18 8psx:P 13 13 0.3846 0.3846 0.3846 -14 8psz:P
19 8wax:Z 13 13 0.3846 0.3846 0.3846 -14
20 3j0l:b 12 12 0.5385 0.5833 0.5833 -16 3j0o:b
21 3lwr:E 12 12 0.5385 0.5833 0.5833 -16
22 4krf:R 12 12 0.5385 0.5833 0.5833 -16
23 5c9h:C 12 12 0.5385 0.5833 0.5833 -16
24 7tnx:B 12 12 0.5385 0.5833 0.5833 -16
25 3lwv:E 11 11 0.5385 0.6364 0.6364 -17
26 3nnh:E 11 11 0.5385 0.6364 0.6364 -17
27 4v5f:AX 11 11 0.5385 0.6364 0.6364 -17 4v5f:CX
28 6a5o:P 11 11 0.5385 0.6364 0.6364 -17
29 8fix:R 11 11 0.5385 0.6364 0.6364 -17
30 8xmd:O 11 11 0.5385 0.6364 0.6364 -17
31 5ki6:B 10 10 0.5385 0.7000 0.7000 -18
32 1zdh:R 13 13 0.3077 0.3077 0.3077 -19 1zdh:S
33 2bny:S 13 13 0.3077 0.3077 0.3077 -19 2c4y:S, 2c4z:S, 1zdi:S
34 2c51:S 13 13 0.3077 0.3077 0.3077 -19
35 2mfh:B 9 9 0.5385 0.7778 0.7778 -19 2mfh:D
36 3j0e:C 13 13 0.3077 0.3077 0.3077 -19
37 4ang:R 14 13 0.5385 0.5000 0.5385 -19
38 4bwm:G 14 13 0.5385 0.5000 0.5385 -19
39 4ngg:B 13 13 0.3077 0.3077 0.3077 -19
40 5d0a:F 14 13 0.5385 0.5000 0.5385 -19
41 5h1k:C 13 13 0.3077 0.3077 0.3077 -19
42 5vm9:B 13 13 0.3077 0.3077 0.3077 -19
43 6cfj:2v 13 13 0.3077 0.3077 0.3077 -19 8cvj:1v, 8cvj:2v, 8cvk:1v, 8cvk:2v, 8cvl:1v, 5doy:2v, 8ev6:2v, 8ev7:1v, 8ev7:2v, 8g2b:1v, 8g2b:2v, 8g2c:2v, 8g2d:1v, 5j4b:2v, 7jqm:2v, 6nd5:1v, 6nd5:2v, 7rq8:1v, 7rq9:1v, 8uvs:2v, 5vp2:2v, 8vtu:1v, 8vtv:1v, 8vtx:1v, 5w4k:1v, 5w4k:2v, 5wis:1v, 5wis:2v, 5wit:1v, 5wit:2v, 4wqy:BV, 6xhv:1v, 6xhv:2v, 6xhw:1v, 4y4p:1v
44 6nit:D 13 13 0.3077 0.3077 0.3077 -19
45 6ny5:C 13 13 0.3077 0.3077 0.3077 -19
46 6uo1:1v 13 13 0.3077 0.3077 0.3077 -19
47 6z6g:H 13 13 0.3077 0.3077 0.3077 -19
48 7jl0:Y 14 13 0.5385 0.5000 0.5385 -19 7jl1:Y
49 7niq:C 14 13 0.5385 0.5000 0.5385 -19
50 7ojl:E 13 13 0.3077 0.3077 0.3077 -19
51 7qtl:R 14 13 0.5385 0.5000 0.5385 -19
52 7r9f:B 13 13 0.3077 0.3077 0.3077 -19
53 7u2i:1v 13 13 0.3077 0.3077 0.3077 -19 7u2i:2v
54 7xd9:E 13 13 0.3077 0.3077 0.3077 -19
55 7y7e:X 13 13 0.3077 0.3077 0.3077 -19
56 7zlq:C 13 13 0.3077 0.3077 0.3077 -19 7zlq:D, 7zlq:E
57 8bf5:M 13 13 0.3077 0.3077 0.3077 -19
58 8dh3:C 9 9 0.5385 0.7778 0.7778 -19 8dh4:C, 8dh5:C
59 8jh3:P 13 13 0.3077 0.3077 0.3077 -19
60 8ki7:F 13 13 0.3077 0.3077 0.3077 -19
61 8qpb:z 13 13 0.3077 0.3077 0.3077 -19 8r0b:z
62 8way:Z 13 13 0.3077 0.3077 0.3077 -19
63 8y6o:A 13 13 0.3077 0.3077 0.3077 -19
64 8z97:F 13 13 0.3077 0.3077 0.3077 -19 8z9h:F, 8z9r:F
65 1yyw:E 12 12 0.4615 0.5000 0.5000 -21 1yyw:G, 1yyw:H, 1yyw:I, 1yyw:K, 1yyw:L
66 3gtl:R 12 12 0.4615 0.5000 0.5000 -21
67 4gha:I 12 12 0.4615 0.5000 0.5000 -21 4gha:J, 4lg2:J, 4lg2:I
68 4k4y:C 12 12 0.4615 0.5000 0.5000 -21 4k4y:G, 4k4y:K, 4k4y:O
69 5d0a:E 12 12 0.4615 0.5000 0.5000 -21
70 5e3h:B 12 12 0.4615 0.5000 0.5000 -21
71 5m1j:X7 12 12 0.4615 0.5000 0.5000 -21
72 5y6z:C 12 12 0.4615 0.5000 0.5000 -21 5y6z:G
73 6alf:R 12 12 0.4615 0.5000 0.5000 -21 6j9e:I, 6j9f:I
74 6ozp:C 12 12 0.4615 0.5000 0.5000 -21 6ozp:D, 6ozs:C, 6ozs:D
75 7n2c:mR 12 12 0.4615 0.5000 0.5000 -21
76 7ori:P 12 12 0.4615 0.5000 0.5000 -21
77 7orl:P 12 12 0.4615 0.5000 0.5000 -21
78 8c8j:C 12 12 0.4615 0.5000 0.5000 -21
79 8j9g:E 12 12 0.4615 0.5000 0.5000 -21
80 8tvs:R 12 12 0.4615 0.5000 0.5000 -21 8tvv:R
81 3f73:Y 11 11 0.4615 0.5455 0.5455 -22
82 3how:3 11 11 0.4615 0.5455 0.5455 -22 3hox:P
83 5gip:I 11 11 0.4615 0.5455 0.5455 -22 5gip:J, 5gip:S, 5gip:T, 7xpl:I, 7xpl:J
84 5xog:P 11 11 0.4615 0.5455 0.5455 -22
85 6rr7:E 11 11 0.4615 0.5455 0.5455 -22
86 7uu5:M 11 11 0.4615 0.5455 0.5455 -22
87 8b9i:C 11 11 0.4615 0.5455 0.5455 -22
88 8d6j:B 11 11 0.4615 0.5455 0.5455 -22 8d71:B
89 8jdl:A 11 11 0.4615 0.5455 0.5455 -22
90 8qoz:z 11 11 0.4615 0.5455 0.5455 -22 8qpe:z1, 8qpk:z, 8qzs:z1, 8r09:z, 8r0a:z
91 8sxt:C 11 11 0.4615 0.5455 0.5455 -22
92 1t0k:D 15 13 0.5385 0.4667 0.5385 -23
93 2bbv:N 10 10 0.4615 0.6000 0.6000 -23
94 3zc0:M 15 13 0.5385 0.4667 0.5385 -23 3zc0:N, 3zc0:O
95 4nh6:B 15 13 0.5385 0.4667 0.5385 -23
96 4wqs:Y 15 13 0.5385 0.4667 0.5385 -23
97 5gio:I 10 10 0.4615 0.6000 0.6000 -23 5gio:J, 5gio:O, 3pla:I, 3pla:J, 3pla:O
98 6ysr:x 15 13 0.5385 0.4667 0.5385 -23
99 7a5g:i4 10 10 0.4615 0.6000 0.6000 -23
100 7aav:2 10 10 0.4615 0.6000 0.6000 -23
101 7b3b:P 10 10 0.4615 0.6000 0.6000 -23
102 7vpx:I 15 13 0.5385 0.4667 0.5385 -23
103 8aby:R 10 10 0.4615 0.6000 0.6000 -23 8abz:R, 8ad1:R
104 8eg7:R 10 10 0.4615 0.6000 0.6000 -23
105 8r3l:R 15 13 0.5385 0.4667 0.5385 -23
106 8r6y:T 15 13 0.5385 0.4667 0.5385 -23
107 1tfw:J 13 13 0.2308 0.2308 0.2308 -24
108 2b2e:S 14 13 0.4615 0.4286 0.4615 -24
109 2bx2:R 14 13 0.4615 0.4286 0.4615 -24
110 2gje:R 13 13 0.2308 0.2308 0.2308 -24
111 2izm:R 13 13 0.2308 0.2308 0.2308 -24 2izm:S
112 2km8:A 13 13 0.2308 0.2308 0.2308 -24
113 4c9d:C 13 13 0.2308 0.2308 0.2308 -24
114 4kzz:k 13 13 0.2308 0.2308 0.2308 -24
115 4m59:C 14 13 0.4615 0.4286 0.4615 -24 4oe1:C
116 4nh5:B 14 13 0.4615 0.4286 0.4615 -24
117 4q0b:e 9 9 0.4615 0.6667 0.6667 -24
118 4zlr:C 14 13 0.4615 0.4286 0.4615 -24
119 5i4a:D 13 13 0.2308 0.2308 0.2308 -24
120 5wsg:b 14 13 0.4615 0.4286 0.4615 -24
121 6f5o:R 14 13 0.4615 0.4286 0.4615 -24 5m3j:R, 4wsa:R
122 6gpg:C 13 13 0.2308 0.2308 0.2308 -24
123 6oj6:T 14 13 0.4615 0.4286 0.4615 -24
124 7abz:8 15 13 0.6923 0.6000 0.6923 -24 7ac7:8
125 7bkp:X 14 13 0.4615 0.4286 0.4615 -24 6g19:X, 6gjz:X, 6gkm:X
126 7bkq:X 15 13 0.6923 0.6000 0.6923 -24 6g1s:X, 6g1x:X, 6h61:X, 6h66:X, 7nga:Y
127 7mjw:M 13 13 0.2308 0.2308 0.2308 -24 7mjw:G, 7mjx:D, 7mjx:M
128 7y7f:X 13 13 0.2308 0.2308 0.2308 -24
129 8as6:P 14 13 0.4615 0.4286 0.4615 -24
130 8ccs:Dd 13 13 0.2308 0.2308 0.2308 -24 8cf5:Dd, 8cku:Dd
131 8eos:R 13 13 0.2308 0.2308 0.2308 -24 8eot:R
132 8h0v:P 14 13 0.4615 0.4286 0.4615 -24
133 8oeu:P 13 13 0.2308 0.2308 0.2308 -24 8oev:P, 8oew:P, 8of0:P
134 8psx:S 13 13 0.2308 0.2308 0.2308 -24 8psz:S
135 8psz:D 14 13 0.4615 0.4286 0.4615 -24 8pt2:D, 8pth:D
136 8urw:R 14 13 0.4615 0.4286 0.4615 -24
137 8wb0:Z 13 13 0.2308 0.2308 0.2308 -24
138 6gv4:D 8 8 0.4615 0.7500 0.7500 -25
139 8asb:T 18 13 0.6923 0.5000 0.6923 -25
140 8i87:H 18 13 0.6923 0.5000 0.6923 -25 8i87:I, 8i87:L, 8i87:S
141 1aq3:S 12 12 0.3846 0.4167 0.4167 -26
142 1b7f:P 12 12 0.3846 0.4167 0.4167 -26 1b7f:Q
143 2gjw:F 12 12 0.3846 0.4167 0.4167 -26 2gjw:J
144 2mgz:C 12 12 0.3846 0.4167 0.4167 -26
145 2om7:D 13 12 0.6154 0.6154 0.6667 -26
146 3gtg:R 12 12 0.3846 0.4167 0.4167 -26 3gtj:R, 3gtm:M, 3gto:R
147 3j0l:3 12 12 0.3846 0.4167 0.4167 -26 3j0o:3, 3j0p:3, 3j0q:3
148 3jag:hh 12 12 0.3846 0.4167 0.4167 -26
149 3jah:hh 12 12 0.3846 0.4167 0.4167 -26
150 3jai:hh 12 12 0.3846 0.4167 0.4167 -26
151 3lrr:C 12 12 0.3846 0.4167 0.4167 -26 3lrr:D
152 4a36:T 18 13 0.8462 0.6111 0.8462 -26
153 4bs2:B 12 12 0.3846 0.4167 0.4167 -26
154 4gl2:F 12 12 0.3846 0.4167 0.4167 -26 4gl2:D
155 4k4t:C 12 12 0.3846 0.4167 0.4167 -26 4k4t:G
156 4ngb:B 12 12 0.3846 0.4167 0.4167 -26 4ngd:B
157 4zld:B 17 13 0.6154 0.4706 0.6154 -26
158 5e08:N 12 12 0.3846 0.4167 0.4167 -26
159 5f8l:B 12 12 0.3846 0.4167 0.4167 -26 5f8m:B
160 6yyt:T 12 12 0.3846 0.4167 0.4167 -26
161 7b3b:T 12 12 0.3846 0.4167 0.4167 -26
162 7bah:C 12 12 0.3846 0.4167 0.4167 -26 7bah:D, 7bai:C, 7bai:D, 7bai:V, 3ncu:C, 3ncu:D
163 7c2k:G 12 12 0.3077 0.3333 0.3333 -26
164 7r9g:B 12 12 0.3846 0.4167 0.4167 -26
165 7tnx:C 12 12 0.3846 0.4167 0.4167 -26 7tny:C, 7tnz:C, 7to0:C
166 7tny:B 12 12 0.3846 0.4167 0.4167 -26 7tnz:B, 7to0:B
167 7xd8:B 12 12 0.3846 0.4167 0.4167 -26 7xd8:K, 7xd8:N, 7xd9:B, 7xd9:H, 7xd9:Q
168 8am9:X 12 12 0.3846 0.4167 0.4167 -26
169 8as7:T 17 13 0.6154 0.4706 0.6154 -26 8r6u:T, 8r6w:T
170 8asd:T 17 13 0.6154 0.4706 0.6154 -26
171 8auv:B 12 12 0.3846 0.4167 0.4167 -26 8b2l:B1, 8ftm:C, 7m50:e, 6zsd:r1, 6zww:B, 6zww:D
172 8bdr:R 12 12 0.3846 0.4167 0.4167 -26
173 8be0:R 12 12 0.3846 0.4167 0.4167 -26
174 8c4t:C 12 12 0.3846 0.4167 0.4167 -26 8qgt:C
175 8d96:E 12 12 0.3846 0.4167 0.4167 -26 8d9d:E
176 8pdy:R 12 12 0.3846 0.4167 0.4167 -26 8pen:R, 8phk:R, 8pib:R, 8pil:R
177 8pfg:R 12 12 0.3846 0.4167 0.4167 -26
178 8pzp:B 12 12 0.3846 0.4167 0.4167 -26 8pzq:D
179 2bs1:S 11 11 0.3846 0.4545 0.4545 -27
180 2nug:E 11 11 0.3846 0.4545 0.4545 -27 2nug:F
181 3hou:3 11 11 0.3846 0.4545 0.4545 -27 3hou:6
182 3hoz:P 11 11 0.3846 0.4545 0.4545 -27
183 3nmr:B 6 6 0.4615 1.0000 1.0000 -27
184 4ngf:E 17 13 0.7692 0.5882 0.7692 -27 4ngf:F, 4ngf:G, 4ngf:H
185 4nha:B 16 13 0.5385 0.4375 0.5385 -27
186 4w5r:B 11 11 0.3846 0.4545 0.4545 -27
187 4wqs:H 16 13 0.5385 0.4375 0.5385 -27
188 5aor:C 11 11 0.3846 0.4545 0.4545 -27 5bkl:e, 7m3t:e, 6qic:E, 6qic:F, 6qic:G, 6qic:H
189 5i9d:B 11 11 0.3846 0.4545 0.4545 -27
190 5i9h:B 11 11 0.3846 0.4545 0.4545 -27
191 5mpl:B 6 6 0.4615 1.0000 1.0000 -27
192 5wzi:B 11 11 0.3846 0.4545 0.4545 -27
193 6a5r:P 11 11 0.3846 0.4545 0.4545 -27
194 6dcl:C 11 11 0.3846 0.4545 0.4545 -27 6dcl:D
195 6g3b:C 11 11 0.3846 0.4545 0.4545 -27
196 6hct:E 11 11 0.3846 0.4545 0.4545 -27
197 6p18:R 11 11 0.3846 0.4545 0.4545 -27 7ubm:R, 7ubn:R
198 6wyb:B 11 11 0.3846 0.4545 0.4545 -27
199 7ki3:E 11 11 0.3846 0.4545 0.4545 -27
200 7ori:H 11 11 0.3846 0.4545 0.4545 -27
201 7uu3:D 11 11 0.3846 0.4545 0.4545 -27
202 8ci5:C 11 11 0.3846 0.4545 0.4545 -27
203 8he5:P 16 13 0.5385 0.4375 0.5385 -27 7wbw:P
204 8hf1:H 11 11 0.3846 0.4545 0.4545 -27 8hf1:K, 8hf1:M
205 8him:P 11 11 0.3846 0.4545 0.4545 -27
206 1a34:C 10 10 0.3846 0.5000 0.5000 -28 5aor:D, 8b9g:C, 5bkl:WW, 7c45:D, 8ftm:D, 6i3p:E, 6i3p:F, 6i3p:G, 6i3p:H, 3i5x:B, 3i5y:B, 3i61:B, 3i62:B, 7m2t:e, 7m2t:g, 7m2t:h, 7m2t:i, 7m2t:j, 7m2t:k, 7m2t:l, 7m2t:m, 7m2t:r, 7m2t:s, 7m2t:jj, 7m2t:kk, 7m2t:ll, 7m2t:mm, 7m2t:nn, 7m2t:pp, 7m2t:qq, 7m2t:uu, 7m2t:vv, 7m2v:QQ, 7m2v:h, 7m2v:T, 7m2v:m, 7m2v:i, 7m2v:e, 7m2v:xx, 7m2v:yy, 7m50:WW, 7m57:e, 7m57:f, 7m57:g, 7m57:h, 7m57:i, 7m57:j, 7m57:k, 7m57:l, 7m57:m, 7m57:n, 7m57:o, 7m57:p, 7m57:q, 7m57:r, 7m57:s, 7m57:hh, 7m57:jj, 7m57:ll, 7m57:mm, 7m57:nn, 7m57:oo, 7m57:pp, 7m57:qq, 7m57:rr, 7m57:ss, 7m57:tt, 7m57:uu, 7m57:vv, 4nia:e, 4nia:g, 4nia:h, 4nia:i, 4nia:j, 4nia:k, 4nia:l, 4nia:m, 4nia:n, 4nia:o, 4nia:p, 4nia:q, 4nia:r, 4nia:s, 6o16:C, 6o16:D, 4oq8:C, 4oq9:e, 4oq9:f, 4oq9:g, 4oq9:h, 4oq9:i, 4oq9:j, 4oq9:k, 4oq9:l, 4oq9:m, 4oq9:n, 4oq9:o, 4oq9:p, 4oq9:q, 4oq9:r, 4oq9:s, 7uj1:D, 6zww:F, 6zww:H
207 2c4r:R 10 10 0.3846 0.5000 0.5000 -28
208 2ja6:P 10 10 0.3846 0.5000 0.5000 -28
209 2om7:B 10 10 0.3846 0.5000 0.5000 -28
210 2r7z:P 10 10 0.3846 0.5000 0.5000 -28
211 3i4m:P 10 10 0.3846 0.5000 0.5000 -28
212 3i4n:P 10 10 0.3846 0.5000 0.5000 -28
213 4v6y:A2 15 13 0.4615 0.4000 0.4615 -28 4v6z:A2, 4v70:A2, 4v71:A2, 4v72:A2, 4v73:A2, 4v75:A2, 4v76:A2, 4v77:A2, 4v78:A2, 4v79:A2, 4v7a:A2
214 4w5t:D 10 10 0.3846 0.5000 0.5000 -28
215 5bz5:B 10 10 0.3846 0.5000 0.5000 -28
216 5gmk:N 15 13 0.4615 0.4000 0.4615 -28 5wsg:N
217 5lzt:hh 15 13 0.4615 0.4000 0.4615 -28 5lzu:hh, 5lzv:hh, 7nwh:hh
218 6gkh:X 15 13 0.4615 0.4000 0.4615 -28 7nic:X
219 6uq3:R 10 10 0.3846 0.5000 0.5000 -28
220 7b3d:P 10 10 0.3846 0.5000 0.5000 -28 7oyg:P, 7oyg:G, 7ozv:P
221 7bkq:Y 15 13 0.4615 0.4000 0.4615 -28 6g1s:Y, 6g1x:Y, 6h61:Y, 6h66:Y, 7nga:X
222 7mkn:R 11 11 0.5385 0.6364 0.6364 -28 7mko:R
223 7pjy:z 10 10 0.3846 0.5000 0.5000 -28
224 8e2a:B 15 13 0.4615 0.4000 0.4615 -28
225 8eoe:R 15 13 0.4615 0.4000 0.4615 -28
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742 6szu:M 10 10 0.2308 0.3000 0.3000 -38
743 6t0s:M 10 10 0.2308 0.3000 0.3000 -38
744 6xki:B 10 10 0.2308 0.3000 0.3000 -38 5zc9:B
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746 7a5f:i4 10 10 0.2308 0.3000 0.3000 -38
747 7bzf:F 10 10 0.2308 0.3000 0.3000 -38
748 7doi:T 15 13 0.3077 0.2667 0.3077 -38
749 7f3j:B 5 5 0.3077 0.8000 0.8000 -38 7f3j:D, 7f3j:F, 7f3j:H
750 7k9y:C 10 10 0.2308 0.3000 0.3000 -38 7k9y:F
751 7mjv:E 15 13 0.3077 0.2667 0.3077 -38
752 7o1c:B7 10 10 0.2308 0.3000 0.3000 -38
753 7o81:AH 10 10 0.2308 0.3000 0.3000 -38
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756 7rip:R 10 10 0.2308 0.3000 0.3000 -38 7rix:R, 8uku:R
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758 7v6c:E 5 5 0.3077 0.8000 0.8000 -38
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760 7xug:R 10 10 0.2308 0.3000 0.3000 -38
761 7y7q:C 10 10 0.2308 0.3000 0.3000 -38
762 7yfx:B 15 13 0.3077 0.2667 0.3077 -38
763 7zvn:C 10 10 0.2308 0.3000 0.3000 -38
764 8acb:B 5 5 0.3077 0.8000 0.8000 -38 8acc:B, 5bkl:i, 5bkl:ll, 5bkn:i, 5bkn:ll, 5bud:E, 5c0y:C, 8enk:N, 5fn1:B, 6hxx:Aa, 6hxx:Ab, 6hxx:Ac, 6hxx:Ad, 6hxx:Ae, 6hxx:Af, 6hxx:Ag, 6hxx:Ah, 6hxx:Ai, 6hxx:Aj, 6hxx:Ak, 6hxx:Al, 6hxx:Am, 6hxx:An, 6hxx:Ao, 6hxx:Ap, 6hxx:Aq, 6hxx:Ar, 6hxx:As, 6hxx:At, 6hxx:Au, 6hxx:Av, 6hxx:Aw, 6hxx:Ax, 6hxx:Ay, 6hxx:Az, 6hxx:Ba, 6hxx:Bb, 6hxx:Bc, 6hxx:Bd, 6hxx:Be, 6hxx:Bf, 6hxx:Bg, 6hxx:Bh, 6hxx:Bi, 5ip2:E, 4j7l:B, 4j7m:B, 7m3t:i, 7m3t:ll, 7m50:i, 1m8v:T, 5odv:a, 5odv:b, 5odv:c, 5odv:d, 5odv:e, 5odv:f, 5odv:g, 5odv:h, 5odv:i, 5odv:j, 5odv:k, 5odv:l, 5odv:m, 5odv:n, 5odv:o, 5odv:p, 5odv:q, 5odv:r, 5odv:s, 5odv:t, 5odv:u, 5odv:v, 5odv:w, 5odv:x, 7og6:R, 8opc:Ab, 8opc:Ad, 8opc:Af, 8opc:Ah, 8opc:Aj, 8opc:Al, 8opc:An, 8opc:Ap, 8opc:Ar, 8opc:At, 8opc:Av, 8opc:Ax, 8opc:Az, 8opc:Bb, 8opc:Bd, 8opc:Bf, 8opc:Bh, 8opc:Bj, 8opc:Bl, 8opc:Bn, 8opc:Bp, 8opc:Br, 8opc:Bt, 8opc:Bv, 8opc:Bx, 8opc:Bz, 8opc:Cb, 8opc:Cd, 8ope:Ab, 8ope:Ad, 8ope:Af, 8ope:Ah, 8ope:Aj, 8ope:Al, 8ope:An, 8ope:Ap, 8ope:Ar, 8ope:At, 8ope:Av, 8ope:Ax, 8ope:Az, 8ope:Bb, 8ope:Bd, 8ope:Bf, 8ope:Bh, 8ope:Bj, 8ope:Bl, 8ope:Bn, 8ope:Bp, 8opl:Aj, 8opl:Ak, 8opl:Al, 8opl:Am, 8opl:An, 8opl:Ao, 8opl:Ap, 8opl:Aq, 8opl:Ar, 8opl:Bb, 8opl:Bc, 8opl:Bd, 8opl:Be, 8opl:Bf, 8opl:Bg, 8opl:Bh, 8opl:Bi, 8opl:Bj, 8opl:Bt, 8opl:Bu, 8opl:Bv, 8opl:Bw, 8opl:Bx, 8opl:By, 8opl:Bz, 8opl:Ca, 8opl:Cb, 3pf5:R, 6ppn:A, 6ppn:I, 8r08:Z1, 6t34:a, 6t34:b, 6t34:c, 6t34:d, 6t34:e, 6t34:f, 6t34:g, 6t34:h, 6t34:i, 6t34:j, 6t34:k, 6t34:l, 6t34:m, 6t34:n, 6t34:o, 6t34:p, 6t34:q, 6t34:r, 6t34:s, 6wre:D, 7z52:R
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766 8asg:T 5 5 0.3077 0.8000 0.8000 -38
767 8b3d:P 10 10 0.2308 0.3000 0.3000 -38 8b3f:P, 2e2h:R, 2e2i:R, 6h68:R, 7kee:R, 7kef:R, 2nvq:R, 2nvx:R, 2nvz:R, 7oo3:P, 7oob:P, 1r9s:R, 1r9t:R, 1sfo:R, 8tug:R, 8tvp:R, 8tvw:R, 8tvx:R, 8tvy:R, 8ukt:R, 6upz:R, 5vvr:R, 5vvs:R, 2yu9:R
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769 8d9h:D 20 13 0.6154 0.4000 0.6154 -38
770 8eh8:R 10 10 0.2308 0.3000 0.3000 -38 8eh9:R, 8eha:R, 8ehf:R, 8ehi:R, 6flp:R
771 8emm:X 15 13 0.3077 0.2667 0.3077 -38
772 8jsl:G 10 10 0.2308 0.3000 0.3000 -38 8jsm:G, 8jsn:G
773 8ki7:E 10 10 0.2308 0.3000 0.3000 -38 8ki8:E
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777 8u9r:R 10 10 0.2308 0.3000 0.3000 -38 8u9x:R
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779 8z9q:D 10 10 0.2308 0.3000 0.3000 -38 8z9r:G, 8z9r:K
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783 2l41:B 4 4 0.3077 1.0000 1.0000 -39
784 2nvt:R 10 10 0.3846 0.5000 0.5000 -39 2vum:P, 1y1w:P, 1y77:P
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786 3hxm:Y 9 9 0.2308 0.3333 0.3333 -39
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788 3k5z:B 9 9 0.2308 0.3333 0.3333 -39
789 3k61:B 9 9 0.2308 0.3333 0.3333 -39
790 3m4o:R 10 10 0.3846 0.5000 0.5000 -39
791 3mj0:B 9 9 0.2308 0.3333 0.3333 -39
792 3oij:C 14 13 0.2308 0.2143 0.2308 -39 3oij:D, 3oin:C
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797 4db2:E 14 13 0.2308 0.2143 0.2308 -39 4db2:F, 4db2:I, 4db2:J, 4db4:C, 4db4:D, 4db4:E, 7liu:X, 7liu:Y
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799 4gzy:R 9 9 0.2308 0.3333 0.3333 -39 4gzz:R
800 4k4u:C 15 13 0.4615 0.4000 0.4615 -39 4k4u:G
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802 4m7d:P 4 4 0.3077 1.0000 1.0000 -39
803 4mdx:C 9 9 0.2308 0.3333 0.3333 -39
804 4v5c:AX 10 9 0.4615 0.6000 0.6667 -39 4v5c:CX, 4v8j:CX
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808 4wqr:4K 14 13 0.2308 0.2143 0.2308 -39
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810 4x6a:R 9 9 0.2308 0.3333 0.3333 -39
811 4z31:D 14 13 0.2308 0.2143 0.2308 -39
812 4z7l:C 14 13 0.2308 0.2143 0.2308 -39 4z7l:F, 4z7l:I
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815 5j30:XX 9 9 0.2308 0.3333 0.3333 -39 5j3c:QX
816 5yki:C 9 9 0.2308 0.3333 0.3333 -39
817 5z9x:R 9 9 0.2308 0.3333 0.3333 -39
818 6een:F 9 9 0.2308 0.3333 0.3333 -39
819 6enj:v 9 9 0.2308 0.3333 0.3333 -39
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821 6kuj:V 13 13 0.0000 0.0000 0.0000 -39 6kuv:V
822 6kuk:V 15 13 0.4615 0.4000 0.4615 -39 6kup:V, 6kur:V, 6kut:V, 6kuu:V
823 6lsf:C 9 9 0.2308 0.3333 0.3333 -39 6lsh:C
824 6mfn:C 9 9 0.2308 0.3333 0.3333 -39
825 6orl:4 9 9 0.2308 0.3333 0.3333 -39 6osk:4, 6osq:4, 6ost:4, 6ot3:4, 6ouo:4
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833 7oro:P 9 9 0.2308 0.3333 0.3333 -39
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836 7qiy:Q 14 13 0.2308 0.2143 0.2308 -39 7qiz:aA
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838 7w59:4 13 13 0.0000 0.0000 0.0000 -39 7w5a:4, 7w5b:4, 6zym:Z
839 7xd8:C 9 9 0.2308 0.3333 0.3333 -39 7xd8:F, 7xd8:I, 7xd8:L, 7xd8:O, 7xd8:R, 7xd9:C, 7xd9:F, 7xd9:I, 7xd9:L, 7xd9:O, 7xd9:R
840 7y81:C 19 13 0.5385 0.3684 0.5385 -39
841 7ygn:B 9 9 0.2308 0.3333 0.3333 -39
842 7z1l:R 9 9 0.2308 0.3333 0.3333 -39 7z1n:R
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851 8pjb:C 9 9 0.2308 0.3333 0.3333 -39
852 8pnq:M 9 9 0.2308 0.3333 0.3333 -39
853 8pss:V 14 13 0.2308 0.2143 0.2308 -39 8pt7:V
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855 8qbk:N 14 13 0.2308 0.2143 0.2308 -39 8qbk:S, 8qbk:X, 8qbl:N, 8qbl:X, 8qbl:Y, 8qbm:N, 8qbm:S, 8qbm:Y
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859 8z97:G 9 9 0.2308 0.3333 0.3333 -39 8z98:D, 8z9h:G, 8z9h:K
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861 2ec0:B 8 8 0.2308 0.3750 0.3750 -40 2ec0:E, 5jxs:B, 4wzm:B, 4wzq:B
862 2n8l:B 8 8 0.2308 0.3750 0.3750 -40
863 2xbm:E 8 8 0.2308 0.3750 0.3750 -40 2xbm:F
864 3avv:G 8 8 0.2308 0.3750 0.3750 -40
865 3bx3:C 8 8 0.2308 0.3750 0.3750 -40 3bx3:D, 7cgi:B, 7cgm:B, 6nod:D, 6nod:E, 6nod:F, 3q0p:C, 3q0p:D
866 3e3j:R 8 8 0.2308 0.3750 0.3750 -40 3e3j:Z
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868 3ol6:B 18 13 0.4615 0.3333 0.4615 -40 3ol6:F, 3ol7:B, 3ol7:F, 3ol9:B, 3ol9:F, 3olb:B, 3olb:F
869 3q0n:C 8 8 0.2308 0.3750 0.3750 -40 3q0s:B
870 3qjp:R 8 8 0.2308 0.3750 0.3750 -40
871 3r2d:S 8 8 0.2308 0.3750 0.3750 -40
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873 4fvu:B 8 8 0.2308 0.3750 0.3750 -40
874 4jvh:D 8 8 0.2308 0.3750 0.3750 -40
875 4rwp:C 18 13 0.4615 0.3333 0.4615 -40
876 5amq:c 8 8 0.2308 0.3750 0.3750 -40 5amr:C
877 5dv7:A 18 13 0.4615 0.3333 0.4615 -40
878 5fj8:T 9 9 0.3846 0.5556 0.5556 -40 6hko:R, 6hlq:R, 6hlr:R, 2r92:P
879 5msg:R 18 13 0.4615 0.3333 0.4615 -40 6szv:R, 6t0v:R, 7z43:RRR
880 5o20:B 8 8 0.2308 0.3750 0.3750 -40
881 5vpo:QV 18 13 0.4615 0.3333 0.4615 -40
882 5w4u:R 9 9 0.3846 0.5556 0.5556 -40 5w51:R, 4y52:R, 4y7n:R
883 5y6z:F 18 13 0.4615 0.3333 0.4615 -40
884 5zq1:B 8 8 0.2308 0.3750 0.3750 -40 5zth:B
885 6b0b:B 8 8 0.2308 0.3750 0.3750 -40 6b0b:F, 6bbo:B, 6bbo:F, 5the:B, 5the:D, 5the:F, 5the:H
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888 6lse:B 8 8 0.2308 0.3750 0.3750 -40
889 6lsg:C 8 8 0.2308 0.3750 0.3750 -40
890 6ovr:I 8 8 0.2308 0.3750 0.3750 -40 5vo8:I
891 6oxi:QX 18 13 0.4615 0.3333 0.4615 -40 6oxi:XX
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893 6szv:M 9 9 0.3846 0.5556 0.5556 -40
894 6uo1:2v 8 8 0.2308 0.3750 0.3750 -40
895 6xlv:B 8 8 0.2308 0.3750 0.3750 -40 6xlw:B, 6xlx:B
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897 7a5k:8 8 8 0.2308 0.3750 0.3750 -40
898 7cgg:B 8 8 0.2308 0.3750 0.3750 -40 7cgk:B, 6noc:B, 6nof:B, 6noh:B, 3q0l:C, 3q0l:D, 3q0q:B
899 7cgh:B 8 8 0.2308 0.3750 0.3750 -40 7cgl:B, 5kla:B
900 7q4l:B 8 8 0.2308 0.3750 0.3750 -40
901 7rzz:B 9 9 0.3846 0.5556 0.5556 -40 8sj7:B
902 7s3b:B 8 8 0.2308 0.3750 0.3750 -40
903 7wl0:B 8 8 0.2308 0.3750 0.3750 -40 7wl0:F
904 7yey:B 8 8 0.2308 0.3750 0.3750 -40
905 8cx1:L 8 8 0.2308 0.3750 0.3750 -40
906 8h69:3 18 13 0.4615 0.3333 0.4615 -40
907 8j72:C 9 9 0.3846 0.5556 0.5556 -40
908 8ooy:P 18 13 0.2308 0.1667 0.2308 -40
909 8s51:P 8 8 0.2308 0.3750 0.3750 -40
910 8u72:U 19 13 0.6923 0.4737 0.6923 -40 8u72:M, 8u72:S, 8u72:X
911 1wwf:B 7 7 0.2308 0.4286 0.4286 -41
912 2bq5:S 17 13 0.3846 0.2941 0.3846 -41 2bu1:R, 2bu1:S, 2c4q:R, 2c4q:S, 2c4y:R, 2c4z:R
913 2bs1:R 12 12 0.1538 0.1667 0.1667 -41 1zse:R
914 2err:B 7 7 0.2308 0.4286 0.4286 -41
915 2jlw:C 7 7 0.2308 0.4286 0.4286 -41 2jlw:D
916 2mxy:B 7 7 0.2308 0.4286 0.4286 -41
917 2r7r:X 7 7 0.2308 0.4286 0.4286 -41 2r7w:X, 2r7x:X, 2r7x:Y
918 2r7t:X 7 7 0.2308 0.4286 0.4286 -41
919 3aoh:Q 7 7 0.2308 0.4286 0.4286 -41 3aoi:Q, 3aoi:U
920 3bso:P 7 7 0.2308 0.4286 0.4286 -41 3h5x:P, 3h5y:P
921 3j0d:H 18 13 0.6154 0.4444 0.6154 -41
922 3j0l:d 7 7 0.2308 0.4286 0.4286 -41 3j0o:d
923 3nl0:B 7 7 0.2308 0.4286 0.4286 -41 4wzm:C, 4wzq:C
924 3nnc:B 7 7 0.2308 0.4286 0.4286 -41
925 3ola:B 17 13 0.3846 0.2941 0.3846 -41 3ola:F
926 3q0n:D 7 7 0.2308 0.4286 0.4286 -41 3q0o:C, 3q0o:D
927 3s15:R 7 7 0.2308 0.4286 0.4286 -41
928 4iqx:B 7 7 0.2308 0.4286 0.4286 -41 3klv:B, 3kms:B, 3kna:B, 4x2b:B
929 4k4s:B 17 13 0.3846 0.2941 0.3846 -41 4k4s:F
930 4k4t:B 17 13 0.3846 0.2941 0.3846 -41 4k4t:F
931 4k4y:F 17 13 0.3846 0.2941 0.3846 -41 4k4y:N
932 4k4z:B 17 13 0.3846 0.2941 0.3846 -41 4k4z:N
933 4oav:A 7 7 0.2308 0.4286 0.4286 -41 4oav:C
934 4qpx:T 7 7 0.2308 0.4286 0.4286 -41 5tsn:T
935 4qqb:P 17 13 0.3846 0.2941 0.3846 -41 4qqb:C
936 4tu9:E 7 7 0.2308 0.4286 0.4286 -41
937 4v4r:AX 17 13 0.3846 0.2941 0.3846 -41
938 4v8u:AX 12 12 0.1538 0.1667 0.1667 -41 4v8u:CX
939 4x4u:G 18 13 0.6154 0.4444 0.6154 -41
940 5epi:D 12 12 0.1538 0.1667 0.1667 -41 5epi:H, 5epi:L, 5epi:P, 5epi:T, 5epi:X, 8rn1:V
941 5ex7:B 7 7 0.2308 0.4286 0.4286 -41
942 5gxh:B 7 7 0.2308 0.4286 0.4286 -41 5h1l:B, 1kq2:R
943 5m5y:R 7 7 0.2308 0.4286 0.4286 -41 5m64:R
944 5xpg:G 17 13 0.3846 0.2941 0.3846 -41
945 6dta:D 7 7 0.2308 0.4286 0.4286 -41
946 6fpq:B 7 7 0.2308 0.4286 0.4286 -41
947 6gml:P 17 13 0.3846 0.2941 0.3846 -41 7pks:P
948 6gz3:Bx 12 12 0.1538 0.1667 0.1667 -41
949 6jnx:R 18 13 0.6154 0.4444 0.6154 -41
950 6nit:C 18 13 0.6154 0.4444 0.6154 -41
951 6oj2:XX 17 13 0.3846 0.2941 0.3846 -41
952 6sqn:Y 17 13 0.3846 0.2941 0.3846 -41
953 6uu8:333 7 7 0.2308 0.4286 0.4286 -41 6uu9:333
954 6uv3:B 7 7 0.2308 0.4286 0.4286 -41
955 6ww6:E 17 13 0.3846 0.2941 0.3846 -41
956 6xbu:E 7 7 0.2308 0.4286 0.4286 -41
957 7el9:C 7 7 0.2308 0.4286 0.4286 -41 7el9:F, 7ela:C, 7elc:C, 6kle:B, 6klh:B, 6klh:D, 7oea:E, 7ojn:E
958 7kx7:B 7 7 0.2308 0.4286 0.4286 -41
959 7m3t:bb 12 12 0.1538 0.1667 0.1667 -41 7syp:7
960 7msc:z 7 7 0.2308 0.4286 0.4286 -41
961 7ojk:D 12 12 0.1538 0.1667 0.1667 -41
962 7orj:H 17 13 0.3846 0.2941 0.3846 -41 7ork:H, 7orl:H, 7orn:H
963 7r81:w1 17 13 0.3846 0.2941 0.3846 -41 8ud3:G, 6y0g:A4
964 7swf:B 17 13 0.3846 0.2941 0.3846 -41
965 7vrl:A 7 7 0.2308 0.4286 0.4286 -41
966 8as7:P 17 13 0.3846 0.2941 0.3846 -41 8asb:P
967 8b6z:B 8 8 0.3846 0.6250 0.6250 -41
968 8bdr:V 12 12 0.1538 0.1667 0.1667 -41 8be0:V, 8bf5:V, 5fmz:H, 5fmz:V, 7r1f:V, 7z4o:UUU, 7z4o:VVV, 7zpl:V, 7zpl:U
969 8bek:R 17 13 0.3846 0.2941 0.3846 -41
970 8c4v:S 7 7 0.2308 0.4286 0.4286 -41
971 8hra:K 17 13 0.3846 0.2941 0.3846 -41 8hra:L, 8hra:M, 8hrb:V, 8hrb:Z, 8hrb:X, 8hrb:W, 8hrb:Y, 8hrb:a
972 8jr8:G 18 13 0.6154 0.4444 0.6154 -41
973 8z8x:E 17 13 0.3846 0.2941 0.3846 -41 8z90:E
974 1k1g:B 11 11 0.1538 0.1818 0.1818 -42
975 1rpu:C 21 13 0.6154 0.3810 0.6154 -42 1rpu:D
976 2ad9:B 6 6 0.2308 0.5000 0.5000 -42 2adb:B, 2adc:B, 2adc:C
977 2g8f:B 6 6 0.2308 0.5000 0.5000 -42 2g8h:B, 2g8i:B, 2g8k:B, 2g8u:B, 2g8v:B, 2g8w:B, 2r7y:B, 3twh:B, 3uld:B, 5us2:B, 5usa:B, 5use:B, 5usg:B, 5w7n:B, 5w7o:B, 5wjr:B
978 2kfy:B 6 6 0.2308 0.5000 0.5000 -42 2kg0:B, 2kg1:B
979 2kh9:B 6 6 0.2308 0.5000 0.5000 -42
980 2lec:B 6 6 0.2308 0.5000 0.5000 -42
981 2mqp:B 6 6 0.2308 0.5000 0.5000 -42
982 2mtv:B 6 6 0.2308 0.5000 0.5000 -42
983 2n7c:B 6 6 0.2308 0.5000 0.5000 -42
984 2o5i:H 16 13 0.3077 0.2500 0.3077 -42 2o5i:Y, 2o5j:H, 2o5j:Y, 2ppb:H, 2ppb:Y
985 2r7s:X 6 6 0.2308 0.5000 0.5000 -42
986 2rqc:B 6 6 0.2308 0.5000 0.5000 -42
987 2ru3:B 6 6 0.2308 0.5000 0.5000 -42
988 2zko:C 21 13 0.6154 0.3810 0.6154 -42 2zko:D
989 3avv:T 11 11 0.1538 0.1818 0.1818 -42
990 3gtq:R 11 11 0.1538 0.1818 0.1818 -42
991 3koa:B 6 6 0.2308 0.5000 0.5000 -42
992 3ol7:J 16 13 0.3077 0.2500 0.3077 -42 3ol7:N
993 3s2h:R 6 6 0.2308 0.5000 0.5000 -42
994 3t3n:B 6 6 0.2308 0.5000 0.5000 -42
995 4bbs:P 6 6 0.2308 0.5000 0.5000 -42 4v1n:P, 4v1o:P
996 4bxx:P 11 11 0.1538 0.1818 0.1818 -42
997 4d25:D 6 6 0.2308 0.5000 0.5000 -42 4d26:D
998 4k4x:B 16 13 0.3077 0.2500 0.3077 -42 4k4x:F, 4k4x:J, 4k4x:N
999 4khp:X 6 6 0.2308 0.5000 0.5000 -42
1000 4kji:C 16 13 0.3077 0.2500 0.3077 -42 4kji:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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